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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043356_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:3:197525207:197527424:1 gene:Zm00001d043356 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chorismate mutase 1 chloroplastic
Sequence

ATGCAGTACCCAAGGGTTTTGCATCCCATTGCTGATTCTATCAATATCAACAAAGAGATT
TGGAAAATGTATTTTGATGAACTTCTTCCAAGATTGGTGAAAAAAGGAAGTGATGGTAAT
GCTGGATCCAGTGCTCTTTGTGACACGACCTGCTTGCAGGCGCTCTCCAAAAGGATCCAC
TATGGGAAGTTTGTGGCAGAGGCTAAGTTTCAGGAGTCCCCGGAAGCTTACATGCCAGCC
ATAATAGCTCAGGACCGTGATCAACTCATGCACCTTCTCACATATGAAACGGTGGAGCGT
GCTATCGAACATAGGGTGGAAGCCAAAGCCAAGATCTTCGGGCAAGAGGTGAACATCGGT
GTGGAGGACAACGGCAGCCCACCGGTGTACAAGATCGTTCCGAGCTTGGTCGCCGAGCTG
TACAGCTACAGAATCATGCCGCTAACCAAAGAGGTTCAAATCGCGTATTTGCTTAGGAGG
CTGGATTGA

Peptide Sequence

PEP ID

Zm00001d043356_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:3:197525207:197527424:1 gene:Zm00001d043356 transcript:Zm00001d043356_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chorismate mutase 1 chloroplastic
Sequence

MQYPRVLHPIADSININKEIWKMYFDELLPRLVKKGSDGNAGSSALCDTTCLQALSKRIH
YGKFVAEAKFQESPEAYMPAIIAQDRDQLMHLLTYETVERAIEHRVEAKAKIFGQEVNIG
VEDNGSPPVYKIVPSLVAELYSYRIMPLTKEVQIAYLLRRLD

Transcript Sequence

Transcript ID

Zm00001d043356_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:197525207:197527424:1 gene:Zm00001d043356 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chorismate mutase 1 chloroplastic
Sequence

CATAGGTTGGGAGATACAAGAGCCCAGATGAGCACCCTTTCTTTCCTGAGGATCTGCCTG
AGCCCCGGTTGCCACCTATGCAGTACCCAAGGGTTTTGCATCCCATTGCTGATTCTATCA
ATATCAACAAAGAGATTTGGAAAATGTATTTTGATGAACTTCTTCCAAGATTGGTGAAAA
AAGGAAGTGATGGTAATGCTGGATCCAGTGCTCTTTGTGACACGACCTGCTTGCAGGCGC
TCTCCAAAAGGATCCACTATGGGAAGTTTGTGGCAGAGGCTAAGTTTCAGGAGTCCCCGG
AAGCTTACATGCCAGCCATAATAGCTCAGGACCGTGATCAACTCATGCACCTTCTCACAT
ATGAAACGGTGGAGCGTGCTATCGAACATAGGGTGGAAGCCAAAGCCAAGATCTTCGGGC
AAGAGGTGAACATCGGTGTGGAGGACAACGGCAGCCCACCGGTGTACAAGATCGTTCCGA
GCTTGGTCGCCGAGCTGTACAGCTACAGAATCATGCCGCTAACCAAAGAGGTTCAAATCG
CGTATTTGCTTAGGAGGCTGGATTGAGTATGTTTATGTAGATGTAAATTGCCAGATCAGA
ACTCCTGGCGTTAAGCCAGAACATTGGTAAATACCGGTTTTGGTGTCAGGATG