Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043350_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:197409841:197413465:-1 gene:Zm00001d043350 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable indole-3-acetic acid-amido synthetase GH3.1
Sequence	ATGGCTCCGACGACGGCCACGGCGGCGGCGGTGGGGACGAAGGCGACGGCGCTGGGGGTG GCGGCGTGCGAGCGCGACGTGGAGAAGCTGGAGTTCATCGAGGACAAGACCAGGAACTTC GACGCGGAGCAGGTGCGCGTGCTCGCGGAGATCCTGGCCCGCAACAACGGCGCCGAGTAC CTGCGGCGGCACGGCATGGAGGGGCGCACGGACCGCCTGGCGTTCAAGGCGTGCGTGCCC GTGGTCACGTACGAGGACCTCCGCCCGGAGATCGAGCGCATCGCCAACGGCGACCGCTCC AACATCATCTCCTCCCACCCCATCACCGAGTTCCTCACTAGCTCGGGGACGTCGGCGGGG GAGAGGAAGCTAATGCCGACGATCGAGGACGAGCTCAACAGGCGCCAGATGCTCTACAGC CTTCTCATGCCCGTCATGAACCTGTACGTGCCTGGGCTGGACAAGGGCAAGGGCCTCTAC TTCCTGTTCATCAAGTCGGAGACGAAGACGCCCGGGGGGCTCCCGGCGCGCCCCGTGCTG ACCAGCTACTACAAGAGCGACCACTTCAAGCACCGCCCCTACGACCCCTACAACGTGTAC ACCAGCCCCACCGCCGCCATCCTCTGCACCGACTCCTTCCAGTCCATGTACTCGCAGATG CTGTGCGGCCTGGTGGCCCGCGCCGAGGTGCTCCGCGTCGGCGCCGTCTTCGCGTCGGGC CTGCTCCGCGCCATCCGCTTCCTGCAGCTCCACTGGCAGGAGCTCGCGCACGACCTCCGG ACGGGCACCCTGAGCGCCAAGGTCACGGAGCCGTCCATCCGGGAGGCCGTGGCCGAGGTG CTGAGGCCCGACGCCGGCCTCGCGGACTTGGTGGAGGCCGAGTGCGGCAAGGAGAGCTGG GAGGGCATCATCACCCGGGTGTGGCCCAACACCAAGTACCTGGACGTGATCGTGACGGGC GCCATGGCGCAGTACATCCCGACGCTCAAGTACTACAGCGGCGGGCTGCCCATGGCGTGC ACCATGTACGCGTCCTCCGAGTGCTACTTCGGCCTCAACCTCCGCCCCATGTGCGACCCG TCGGAGGTGTCCTACACCATCATGCCCAACATGGGCTACTTCGAGCTGCTGCCGCACGAC CCGGACGCTGTGCCGCCGTCCAGGGACGACCCGCCGCCGCGGCTGCTGGACCTGGCGGAC GCCGAGGTGGGCAGGGACTACGAGCTGGTGATCACCACCTACGCGGGGCTCTGCCGCTAC CGCGTCGGCGACATCCTGCACGTCACCGGCTTCCACAACGCGGCGCCGCAGTTCCGCTTC GTGCGCCGCAAGAACGTGCTCCTCAGCGTCGATTCCGACAAGACGGACGAGGCGGAGCTG CAGGCCGCCGTGGAGCGCGCGGCGCGCCTGCTGGCGCCCTACGACGCGGCCATCGCCGAG TACACGAGCCAGGCGGACGCCACCACCATCCCGGGCCACTACGTCGTGTACTGGGAGCTC ATGGTGCGGGAGGGCGGGGCGTCGCCCGACGCAGCCGTCTTCGAGCGCTGCTGCCTGGAG ATGGAGGAGGCCCTGAACGCGGTGTACAGGCAGGGCCGCAACGGGGACGCCATCGGGCCG CTGGAGATCCGGGTGGTGCGCGGCGGCACGTTCGAGGAGGTGATGGACTACGCCATCTCG CGCGGCGCCTCTATCAACCAGTACAAGGCGCCGAGGTGCGTGTCGTTCGGACCCATCATC GAGCTGCTCAACTCCAGGGTGGTGTCCAGCCACTTCAGCCCGGCGTGCCCCACGTACAGC CCGCACAAGAAGTGA

Peptide Sequence

PEP ID	Zm00001d043350_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:197409841:197413465:-1 gene:Zm00001d043350 transcript:Zm00001d043350_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable indole-3-acetic acid-amido synthetase GH3.1
Sequence	MAPTTATAAAVGTKATALGVAACERDVEKLEFIEDKTRNFDAEQVRVLAEILARNNGAEY LRRHGMEGRTDRLAFKACVPVVTYEDLRPEIERIANGDRSNIISSHPITEFLTSSGTSAG ERKLMPTIEDELNRRQMLYSLLMPVMNLYVPGLDKGKGLYFLFIKSETKTPGGLPARPVL TSYYKSDHFKHRPYDPYNVYTSPTAAILCTDSFQSMYSQMLCGLVARAEVLRVGAVFASG LLRAIRFLQLHWQELAHDLRTGTLSAKVTEPSIREAVAEVLRPDAGLADLVEAECGKESW EGIITRVWPNTKYLDVIVTGAMAQYIPTLKYYSGGLPMACTMYASSECYFGLNLRPMCDP SEVSYTIMPNMGYFELLPHDPDAVPPSRDDPPPRLLDLADAEVGRDYELVITTYAGLCRY RVGDILHVTGFHNAAPQFRFVRRKNVLLSVDSDKTDEAELQAAVERAARLLAPYDAAIAE YTSQADATTIPGHYVVYWELMVREGGASPDAAVFERCCLEMEEALNAVYRQGRNGDAIGP LEIRVVRGGTFEEVMDYAISRGASINQYKAPRCVSFGPIIELLNSRVVSSHFSPACPTYS PHKK

Transcript Sequence

Transcript ID	Zm00001d043350_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:197409841:197413465:-1 gene:Zm00001d043350 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable indole-3-acetic acid-amido synthetase GH3.1
Sequence	AACGGCAACGGCAACGGCATCCTCCCTTCGCAAATTGCAAGCAAGCCGGCAAGGGACGGC ACCAACAAGAGCGCGATCGACCTACCAAGCTAGCTAGCGAATTAACCTTCTCCTCCCATG GCTCCGACGACGGCCACGGCGGCGGCGGTGGGGACGAAGGCGACGGCGCTGGGGGTGGCG GCGTGCGAGCGCGACGTGGAGAAGCTGGAGTTCATCGAGGACAAGACCAGGAACTTCGAC GCGGAGCAGGTGCGCGTGCTCGCGGAGATCCTGGCCCGCAACAACGGCGCCGAGTACCTG CGGCGGCACGGCATGGAGGGGCGCACGGACCGCCTGGCGTTCAAGGCGTGCGTGCCCGTG GTCACGTACGAGGACCTCCGCCCGGAGATCGAGCGCATCGCCAACGGCGACCGCTCCAAC ATCATCTCCTCCCACCCCATCACCGAGTTCCTCACTAGCTCGGGGACGTCGGCGGGGGAG AGGAAGCTAATGCCGACGATCGAGGACGAGCTCAACAGGCGCCAGATGCTCTACAGCCTT CTCATGCCCGTCATGAACCTGTACGTGCCTGGGCTGGACAAGGGCAAGGGCCTCTACTTC CTGTTCATCAAGTCGGAGACGAAGACGCCCGGGGGGCTCCCGGCGCGCCCCGTGCTGACC AGCTACTACAAGAGCGACCACTTCAAGCACCGCCCCTACGACCCCTACAACGTGTACACC AGCCCCACCGCCGCCATCCTCTGCACCGACTCCTTCCAGTCCATGTACTCGCAGATGCTG TGCGGCCTGGTGGCCCGCGCCGAGGTGCTCCGCGTCGGCGCCGTCTTCGCGTCGGGCCTG CTCCGCGCCATCCGCTTCCTGCAGCTCCACTGGCAGGAGCTCGCGCACGACCTCCGGACG GGCACCCTGAGCGCCAAGGTCACGGAGCCGTCCATCCGGGAGGCCGTGGCCGAGGTGCTG AGGCCCGACGCCGGCCTCGCGGACTTGGTGGAGGCCGAGTGCGGCAAGGAGAGCTGGGAG GGCATCATCACCCGGGTGTGGCCCAACACCAAGTACCTGGACGTGATCGTGACGGGCGCC ATGGCGCAGTACATCCCGACGCTCAAGTACTACAGCGGCGGGCTGCCCATGGCGTGCACC ATGTACGCGTCCTCCGAGTGCTACTTCGGCCTCAACCTCCGCCCCATGTGCGACCCGTCG GAGGTGTCCTACACCATCATGCCCAACATGGGCTACTTCGAGCTGCTGCCGCACGACCCG GACGCTGTGCCGCCGTCCAGGGACGACCCGCCGCCGCGGCTGCTGGACCTGGCGGACGCC GAGGTGGGCAGGGACTACGAGCTGGTGATCACCACCTACGCGGGGCTCTGCCGCTACCGC GTCGGCGACATCCTGCACGTCACCGGCTTCCACAACGCGGCGCCGCAGTTCCGCTTCGTG CGCCGCAAGAACGTGCTCCTCAGCGTCGATTCCGACAAGACGGACGAGGCGGAGCTGCAG GCCGCCGTGGAGCGCGCGGCGCGCCTGCTGGCGCCCTACGACGCGGCCATCGCCGAGTAC ACGAGCCAGGCGGACGCCACCACCATCCCGGGCCACTACGTCGTGTACTGGGAGCTCATG GTGCGGGAGGGCGGGGCGTCGCCCGACGCAGCCGTCTTCGAGCGCTGCTGCCTGGAGATG GAGGAGGCCCTGAACGCGGTGTACAGGCAGGGCCGCAACGGGGACGCCATCGGGCCGCTG GAGATCCGGGTGGTGCGCGGCGGCACGTTCGAGGAGGTGATGGACTACGCCATCTCGCGC GGCGCCTCTATCAACCAGTACAAGGCGCCGAGGTGCGTGTCGTTCGGACCCATCATCGAG CTGCTCAACTCCAGGGTGGTGTCCAGCCACTTCAGCCCGGCGTGCCCCACGTACAGCCCG CACAAGAAGTGATGACCTAATAGCATTGGCCGTCGGAGGCCCAGACTGAGCTACTACACT TCTGCTAGTACTATTACTACTTGTTGCTCTCTACAGTGCGTGTCTTTCGGTTCCTTCTCG TGTACGTACAAGGCAGAGGAGTGAATTAGTCACGCTCCTGCTTGGTTCTGTGGTAACTCT TACTCCACTGCTAGTTGTTACATATACTTGTGCGTGTCATGTCATTTCTCGAGGAGAAAT GACTAGTGTTTGTACCTGTAAGACGGTATCACAGTAACGTCATTCTTGGCCTAATATCAT AACTGGCCTTCTCGATACCTGTTTATGGT