Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043335_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:3:196987260:196989993:1 gene:Zm00001d043335 gene_biotype:protein_coding transcript_biotype:protein_coding description:Branched-chain-amino-acid aminotransferase 5 chloroplastic
Sequence	ATGCAGGCAATTATATCCAGGGAGGAAGCTATAATTCAGAAGGAATCCATACTTGACAAA CGTGAAAGTGAACTATTGATTCTCCAAGAGACCATTGCAAGCAAAGAAAGGGCTGAAATA GAAAGGCTCCGTCAAGAGGAAGAAATTGCCTTGGTGAGGAGGAGGCAGGAATTTGACACT GACATGGAAATTAAGCTCACTTCTTTTGAGGAAGAGATTGATGCAAGGAAAGCCTTGCTC GATCAAAGGGAAACCACCATCAATGAGAAGGAGGATGCAGTGGCGCAAAGGGAACAGAAT CTCAACCTTAGGTTTGCTGAGTTAGCGAACAAGGAAGAATCTTTGGTGAAGAAATCAGAT GAGTTAAGGGAGGAAGAGAAAAGGCTCTCCTCTGAGAGAGAGACACTGCACATTGATCTG CAAAAAGAAAAGGAGGAAATTCATAACATGAAATTGGATTTAGAGAAGGAAAAATCTTTC TTTGAGGAGGAGAAGCGTGAAGCGATTCAAGCTCAGGAGAATCTAGCAATAACCCAAAAT GAGCGAGAAGATTTACAAAGTTTGCAGGTGAAACTTAAAGATGAAATTGATAGTCTGAGA GCCCAAAAGGTTGACCTAATGGCTGATGCAGAAAGGCTATTATCAGAAAAAGAAAGGTTT GAGATTGAATGGGAGTTGATCGATGAGAAGAAGGAGGAACTACAAAAGGAGGCAGCCAGG ATTGCTGAAGAACGAAGAGTAATAGATGAGCATCTCAAGAGCGAATTTGATATTATCAAA CAAGAAAAGGAAGATCTCCGTGTTCAGTTAAAAATTAGTACAGAATCCCTTGCTCATGAA CATGCTGAATTCATGAATAAGATGCAGCAAGAGCATGCTAGTTGGCTTAGCAGGATACAA TTAGAAAGAGAAGATCTGAAGAAAGATATTGATATCCAGAGAACCGAGTTACTGAATTCT GCAAAGGCTAGGCAGATGGAAATAGATTCATATTTGAGGGAAAAAGAAGAGGAGTTTGAA CAGAAAAAATCCAAGGAACTTGAATACATCAATTCTGAAAAGGAAACTATCAGCTCAAAA CTAGAACATGTCAGGCTTGAATTGCAAAAACTTGAGGAGGAGAGGAAAAGGTCTATGCTG GAGCGAGAGAGAAGAGAGGAAGAGCTGTCTGAAACAAAGAAGACTATAGACGCGCTTAAT GAGCAACGCGAGAAGTTACAAGAGCAAAGAAAACTGCTTCATTCAGACCGAAAATCAATT ACACAGCAAATGCAGCTGCTTAATGAGTTAGAAGAGCTGAAGATTGAATCTGAGAACAGG CAACTGTCTTTGAGACAGTGTGGGAAATCAAAGCATGCTGGTGTGGAAAACCTGGAAGAC AACGGTGTTCACCTGTCTCCTGATGAGGATCAAAATGCTAGTCCAAAACAAACTACTGTA AAGAAATTGGAAGTGTCCCCTTCAGTCTCCACACCAATTTCTTGGGTTAAAAAATGTGCT CAGGTGATATTCAAACGCTCTCCAGAGAAGAGTGCTGATCCCAACAATGATATACCTCCA AAGTTGGGAAATGTCAATGACTGTACCTCCTTAGCTACTGCCTATTCAGATGGATTGTTT GCTTGTCACCTGGAAAATGGTGCTGAGAAAGTACCACAAGCTATCGACGGTCTGAAAGTT GGGAAAAAGAGGCTTAATAATGCACTCTCTCATGGTGACTCCGAAATTTCACAGCCAAAA CGCAAGCAGCAAAAGAGCGCTACTCAGATTTTGAGAGTGATTGGAGGAGAAATTGATTCC AACTGTATGTATTGTCTTGTCTAA

Peptide Sequence

PEP ID	Zm00001d043335_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:3:196987260:196989993:1 gene:Zm00001d043335 transcript:Zm00001d043335_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Branched-chain-amino-acid aminotransferase 5 chloroplastic
Sequence	MQAIISREEAIIQKESILDKRESELLILQETIASKERAEIERLRQEEEIALVRRRQEFDT DMEIKLTSFEEEIDARKALLDQRETTINEKEDAVAQREQNLNLRFAELANKEESLVKKSD ELREEEKRLSSERETLHIDLQKEKEEIHNMKLDLEKEKSFFEEEKREAIQAQENLAITQN EREDLQSLQVKLKDEIDSLRAQKVDLMADAERLLSEKERFEIEWELIDEKKEELQKEAAR IAEERRVIDEHLKSEFDIIKQEKEDLRVQLKISTESLAHEHAEFMNKMQQEHASWLSRIQ LEREDLKKDIDIQRTELLNSAKARQMEIDSYLREKEEEFEQKKSKELEYINSEKETISSK LEHVRLELQKLEEERKRSMLERERREEELSETKKTIDALNEQREKLQEQRKLLHSDRKSI TQQMQLLNELEELKIESENRQLSLRQCGKSKHAGVENLEDNGVHLSPDEDQNASPKQTTV KKLEVSPSVSTPISWVKKCAQVIFKRSPEKSADPNNDIPPKLGNVNDCTSLATAYSDGLF ACHLENGAEKVPQAIDGLKVGKKRLNNALSHGDSEISQPKRKQQKSATQILRVIGGEIDS NCMYCLV

Transcript Sequence

Transcript ID	Zm00001d043335_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:196987260:196989993:1 gene:Zm00001d043335 gene_biotype:protein_coding transcript_biotype:protein_coding description:Branched-chain-amino-acid aminotransferase 5 chloroplastic
Sequence	CACTGCAAAATCATTAGAAGCAGACTGCATTCGAACTCGCAACACCTCTCTGAGAAGACT GCAAGACATTGAAGATCGCGAAGATCAGCTAAGAAGATACCAAACATCTTTTGAACTTGA GAATGCATCGAAAGAGAAAGAGATTAACCTCCTGAGGAAATCGTTGGATGATACCAAAAA AATTTTGCATGAAAAGGAGCAATGTTTACTGAAAGAACAAGTACTTCTTAATCAGAGGGA TGACAGCATCCTTGAGAGACTTGCGTACATAACTAGCTCAGAGAAAAGGTTGGAGGAGGA AAAGTTAAATCTCGAAGATGAAAGAAAGGTTCTTTTGGAAGAGAAAAATAAGCTGGATCT GAACATGCAGGCAATTATATCCAGGGAGGAAGCTATAATTCAGAAGGAATCCATACTTGA CAAACGTGAAAGTGAACTATTGATTCTCCAAGAGACCATTGCAAGCAAAGAAAGGGCTGA AATAGAAAGGCTCCGTCAAGAGGAAGAAATTGCCTTGGTGAGGAGGAGGCAGGAATTTGA CACTGACATGGAAATTAAGCTCACTTCTTTTGAGGAAGAGATTGATGCAAGGAAAGCCTT GCTCGATCAAAGGGAAACCACCATCAATGAGAAGGAGGATGCAGTGGCGCAAAGGGAACA GAATCTCAACCTTAGGTTTGCTGAGTTAGCGAACAAGGAAGAATCTTTGGTGAAGAAATC AGATGAGTTAAGGGAGGAAGAGAAAAGGCTCTCCTCTGAGAGAGAGACACTGCACATTGA TCTGCAAAAAGAAAAGGAGGAAATTCATAACATGAAATTGGATTTAGAGAAGGAAAAATC TTTCTTTGAGGAGGAGAAGCGTGAAGCGATTCAAGCTCAGGAGAATCTAGCAATAACCCA AAATGAGCGAGAAGATTTACAAAGTTTGCAGGTGAAACTTAAAGATGAAATTGATAGTCT GAGAGCCCAAAAGGTTGACCTAATGGCTGATGCAGAAAGGCTATTATCAGAAAAAGAAAG GTTTGAGATTGAATGGGAGTTGATCGATGAGAAGAAGGAGGAACTACAAAAGGAGGCAGC CAGGATTGCTGAAGAACGAAGAGTAATAGATGAGCATCTCAAGAGCGAATTTGATATTAT CAAACAAGAAAAGGAAGATCTCCGTGTTCAGTTAAAAATTAGTACAGAATCCCTTGCTCA TGAACATGCTGAATTCATGAATAAGATGCAGCAAGAGCATGCTAGTTGGCTTAGCAGGAT ACAATTAGAAAGAGAAGATCTGAAGAAAGATATTGATATCCAGAGAACCGAGTTACTGAA TTCTGCAAAGGCTAGGCAGATGGAAATAGATTCATATTTGAGGGAAAAAGAAGAGGAGTT TGAACAGAAAAAATCCAAGGAACTTGAATACATCAATTCTGAAAAGGAAACTATCAGCTC AAAACTAGAACATGTCAGGCTTGAATTGCAAAAACTTGAGGAGGAGAGGAAAAGGTCTAT GCTGGAGCGAGAGAGAAGAGAGGAAGAGCTGTCTGAAACAAAGAAGACTATAGACGCGCT TAATGAGCAACGCGAGAAGTTACAAGAGCAAAGAAAACTGCTTCATTCAGACCGAAAATC AATTACACAGCAAATGCAGCTGCTTAATGAGTTAGAAGAGCTGAAGATTGAATCTGAGAA CAGGCAACTGTCTTTGAGACAGTGTGGGAAATCAAAGCATGCTGGTGTGGAAAACCTGGA AGACAACGGTGTTCACCTGTCTCCTGATGAGGATCAAAATGCTAGTCCAAAACAAACTAC TGTAAAGAAATTGGAAGTGTCCCCTTCAGTCTCCACACCAATTTCTTGGGTTAAAAAATG TGCTCAGGTGATATTCAAACGCTCTCCAGAGAAGAGTGCTGATCCCAACAATGATATACC TCCAAAGTTGGGAAATGTCAATGACTGTACCTCCTTAGCTACTGCCTATTCAGATGGATT GTTTGCTTGTCACCTGGAAAATGGTGCTGAGAAAGTACCACAAGCTATCGACGGTCTGAA AGTTGGGAAAAAGAGGCTTAATAATGCACTCTCTCATGGTGACTCCGAAATTTCACAGCC AAAACGCAAGCAGCAAAAGAGCGCTACTCAGATTTTGAGAGTGATTGGAGGAGAAATTGA TTCCAACTGTATGTATTGTCTTGTCTAATGGCAGCAGCCCATCAGTTCTAGAAGAAAAAT GTTCAAAGAAT