Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043325_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:196559859:196566398:-1 gene:Zm00001d043325 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plastid transcriptionally active chromosome 12 homolog description: plastid transcriptionally active chromosome 12 homolog
Sequence	ATGGCGTCCTGCTACAACCCGTGGCGCCTATTCCCAGGCATGTCGACGGCGGTCCCTGCC GGGCCCGTCACGGCGCCGGCTCATTCTCGCACCTGCAAGTCCTCGAAAGTGTTCAGTGCT TTGCCTCACCGGAGGGGTCTGCTGTTCCTGGGCACGCGGCGTGCCAGGATCAAGTGCGTC AAGGACGACTCTCTCCATTTCGACCCGTCGAAGATAGAACCGCCACCGTACTCCAGCTAC TTCGACTCCACATCCGGTCAGCTCGAGCCGGCGTCGGGCGCTCGGGCAAGCATACCCGGG AAGGAGTACTGGCCAGAGGGCACGGCGGCCCGCGTCCGTGCCGCGCGAGCGCCTGCTCCG GTTGGGGAGTCAGCTGGGATGCCATCATTTGGCACGAAGCCCGGGAGCAGGAGGAGAGGG TATAAGGAGCAGGTGACGTCGGCGTCAGGAACGGAGGGTGCACAGACTGATGACAGAAAG GATGGTGATGAACCTGATGTGGCTATTATAGGCTCTGGGGACGATGCATTGGAGGAGATA AAGGATTCGGTGGATGAGTATGTCATTTATGAGACACCAGAGGAAGAGGAGCTGAGTGAG TATGACATGGACAAAATGATGGGGCGGCCACACCCGTTCATTGATCCAGCAAAGGCAATG TCACTAGGGGAGCCGAAAACCAGTGAAGAGCTCTGGTGGCACTGGAGGAGGAAGTCTCAG GAGGAGGAAATGTGGTCAAGATGGCAGAGGAGGCGTCCAGATGTTGACACGGTTTTTGCA AAGGCAATGGCGGAGACTGGGCAAATTAAAATTTTTGGGGACCATCCTTCACGGACAGAA GCTGCTCTTGCAAAGACAAGAAGACATTTGTACAAAGAGGAAAGGTTAGAAGCAGAGCAA AGGAGACTAGAAGAAATAGGGCCAATAGCGTACTACTCAGAATGGGTTGAAGCTTATAAA AACAAGGATACATCACGTGAGGCCATACAGAAGCACTTTGAGGAAACTGGCGAAGATGAG AATGTTCAACTTATAAAAATGTTTCAACACCAAACTGCTGGGGAATATCGTATCATGATG GGCACCGATGTGCGTATTCAGCGAGATCCTTTGGCCATGAGAATGCGGGAAGACCAGATC AAACAGATTTGGGGCGGTGATCCTGTCTATCCAACAATTAATTATGTTCAGGATCCTGAT GAAGTGATTGACTACAGAGGTCCTGAATTTCATGAGCCTACCCCTGAAGTTGTACCTTAC CTGATGGAGCATGGGATAATGATCACAAAGGAAGAGCTATATGCACGTCTGAATGAAGAG AGAGAGGACGTCAATCAAGACATAACGTATATTCCTGAAGCTAAAGATCCTATGGCTACC GCCATTGATATAGGAGAGCATTCTTACAATGAAGACAGTGATGATGAGGATGAGGATGTC GATAAAGCTGCTGCACAGCCTCAATCACTAGAGGATGAGGAAGACGATAGGGATGATGTT GCAGAAGTAGAAGAGAAAGTGAACCAGAATTGGAGTGCTCTAAAGTCTACTGGACAGGCT GAAAAGCCCAAGGAAAAATCAAAGAAAGATGAAATGACACTAAAAGAAGCTATTGACGAT TCTGAGAACCTAACTGACTTTCTTATGGACTTTGAGGAAACCGAGTAA

Peptide Sequence

PEP ID	Zm00001d043325_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:196559859:196566398:-1 gene:Zm00001d043325 transcript:Zm00001d043325_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plastid transcriptionally active chromosome 12 homolog description: plastid transcriptionally active chromosome 12 homolog
Sequence	MASCYNPWRLFPGMSTAVPAGPVTAPAHSRTCKSSKVFSALPHRRGLLFLGTRRARIKCV KDDSLHFDPSKIEPPPYSSYFDSTSGQLEPASGARASIPGKEYWPEGTAARVRAARAPAP VGESAGMPSFGTKPGSRRRGYKEQVTSASGTEGAQTDDRKDGDEPDVAIIGSGDDALEEI KDSVDEYVIYETPEEEELSEYDMDKMMGRPHPFIDPAKAMSLGEPKTSEELWWHWRRKSQ EEEMWSRWQRRRPDVDTVFAKAMAETGQIKIFGDHPSRTEAALAKTRRHLYKEERLEAEQ RRLEEIGPIAYYSEWVEAYKNKDTSREAIQKHFEETGEDENVQLIKMFQHQTAGEYRIMM GTDVRIQRDPLAMRMREDQIKQIWGGDPVYPTINYVQDPDEVIDYRGPEFHEPTPEVVPY LMEHGIMITKEELYARLNEEREDVNQDITYIPEAKDPMATAIDIGEHSYNEDSDDEDEDV DKAAAQPQSLEDEEDDRDDVAEVEEKVNQNWSALKSTGQAEKPKEKSKKDEMTLKEAIDD SENLTDFLMDFEETE

Transcript Sequence

Transcript ID	Zm00001d043325_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:196559859:196566398:-1 gene:Zm00001d043325 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plastid transcriptionally active chromosome 12 homolog description: plastid transcriptionally active chromosome 12 homolog
Sequence	AAAGACAACCTCCTTCCACGTGAGCGCTTTCTTCCTTCAGCCTTCTCGTTATCCTGAACG CGGCAATCTCCGAAGGTCCCATCCAAAACCTCGCCGCCGGATTCGCACCTCACTCTCGCC CGCGCACTACGAATTGACTGACGCCTACGCCCTACCGCTGCAAGCAGCACCATAGCGGGA GCCGCTACCATGGCGTCCTGCTACAACCCGTGGCGCCTATTCCCAGGCATGTCGACGGCG GTCCCTGCCGGGCCCGTCACGGCGCCGGCTCATTCTCGCACCTGCAAGTCCTCGAAAGTG TTCAGTGCTTTGCCTCACCGGAGGGGTCTGCTGTTCCTGGGCACGCGGCGTGCCAGGATC AAGTGCGTCAAGGACGACTCTCTCCATTTCGACCCGTCGAAGATAGAACCGCCACCGTAC TCCAGCTACTTCGACTCCACATCCGGTCAGCTCGAGCCGGCGTCGGGCGCTCGGGCAAGC ATACCCGGGAAGGAGTACTGGCCAGAGGGCACGGCGGCCCGCGTCCGTGCCGCGCGAGCG CCTGCTCCGGTTGGGGAGTCAGCTGGGATGCCATCATTTGGCACGAAGCCCGGGAGCAGG AGGAGAGGGTATAAGGAGCAGGTGACGTCGGCGTCAGGAACGGAGGGTGCACAGACTGAT GACAGAAAGGATGGTGATGAACCTGATGTGGCTATTATAGGCTCTGGGGACGATGCATTG GAGGAGATAAAGGATTCGGTGGATGAGTATGTCATTTATGAGACACCAGAGGAAGAGGAG CTGAGTGAGTATGACATGGACAAAATGATGGGGCGGCCACACCCGTTCATTGATCCAGCA AAGGCAATGTCACTAGGGGAGCCGAAAACCAGTGAAGAGCTCTGGTGGCACTGGAGGAGG AAGTCTCAGGAGGAGGAAATGTGGTCAAGATGGCAGAGGAGGCGTCCAGATGTTGACACG GTTTTTGCAAAGGCAATGGCGGAGACTGGGCAAATTAAAATTTTTGGGGACCATCCTTCA CGGACAGAAGCTGCTCTTGCAAAGACAAGAAGACATTTGTACAAAGAGGAAAGGTTAGAA GCAGAGCAAAGGAGACTAGAAGAAATAGGGCCAATAGCGTACTACTCAGAATGGGTTGAA GCTTATAAAAACAAGGATACATCACGTGAGGCCATACAGAAGCACTTTGAGGAAACTGGC GAAGATGAGAATGTTCAACTTATAAAAATGTTTCAACACCAAACTGCTGGGGAATATCGT ATCATGATGGGCACCGATGTGCGTATTCAGCGAGATCCTTTGGCCATGAGAATGCGGGAA GACCAGATCAAACAGATTTGGGGCGGTGATCCTGTCTATCCAACAATTAATTATGTTCAG GATCCTGATGAAGTGATTGACTACAGAGGTCCTGAATTTCATGAGCCTACCCCTGAAGTT GTACCTTACCTGATGGAGCATGGGATAATGATCACAAAGGAAGAGCTATATGCACGTCTG AATGAAGAGAGAGAGGACGTCAATCAAGACATAACGTATATTCCTGAAGCTAAAGATCCT ATGGCTACCGCCATTGATATAGGAGAGCATTCTTACAATGAAGACAGTGATGATGAGGAT GAGGATGTCGATAAAGCTGCTGCACAGCCTCAATCACTAGAGGATGAGGAAGACGATAGG GATGATGTTGCAGAAGTAGAAGAGAAAGTGAACCAGAATTGGAGTGCTCTAAAGTCTACT GGACAGGCTGAAAAGCCCAAGGAAAAATCAAAGAAAGATGAAATGACACTAAAAGAAGCT ATTGACGATTCTGAGAACCTAACTGACTTTCTTATGGACTTTGAGGAAACCGAGTAATAC TCTGGACATTTTGCTATTCTGTCCCATCACACATGATTCTTGAGAACTTACTTCTGGAGA CTCATAGCCCTTAGGGGCTAGGGGCGATGAAGAAAACTGGATGTCCACAAAACTCTACTT GCTCAATACGATGGAAGGTAGCTCCAGCTGCCTGTTTTGATTCACAAGTTGGCAATGCTA TCAGAAAAAAGGAATCCAGATAGAATGTTGTGGCGCATGGCTCAAGAATTGACAACAATC TTCATGCTTTTGAAGAAACAAGAGAAGCCACAAAACAAGAGATAAGGAGTAGCTTAACCA TTTGCAGTTGGAACTATGTTAGCCTTCTTAGGCTGTCCGCAGAAGATCGTGTAAAATAGG AAATTCACACTGTAGATTACATTATTTGCAGAGTTAAGTTTGAAAAAGAAGATAAGACAT GAGATGAGATATGATAGCTGCTAGAGACAGTGTTACACCATAAATAATATATTTCGACTA GGCATGAGCTGTGCGTTTTTAGATAAGTTTGCCAGTTAGGGTGTGTGTGGTTTATTGGTT ACAATGATGCGACGAGATAAGACAAGACAATATAAGCTTGTTTGG