Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043320_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:3:196441319:196446602:-1 gene:Zm00001d043320 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	ATGAAACCACCACGGCTCTTTCCCCTCCTCCGCCGCCACCTCTCATCCGCCGCCGACGCC ACCGCCGACGCCGCGGAGCTTTCCAGCGCGCTATCCGTGGCGCCCTCCTCAGATGCGAAA CGCGATCTTGCCATCCTGCTCCGCCGCCTTGGCGGCCGCGGTCTCGCCTCCGCCCTCTCG TCCCTTCCGGCTCCGCTTCCCGCCTCCTCCGCCCTGCGCCTCCTTCAGCATATTCTCTCC GACACCCACGCGTCCGCCTCCCGCCACGCCGAGGACCTCCTGTCTCCTCGCGTCTCTACG CTCCTCCTACCATCGCTCGTCGCCGATGGCGCCTCGCTACCGTCCGCGCGCCGCCTCATC TCACGCCTCCTCTTCTTCAACCCTCTTTCTGTCGCCGCAGCGGCTATCGCGGACTCCGAC TGCACTGCCACAGCGGACCTTCTCGTCCGCGCCTGCCTCAACTCGCCTGCCCCCGGATCT CTGTCCTGTGCCGCCGATGCCTTTCTCGAGCTTTCCACACGTGGTGCATCACCGTCCATC AAGACATGCAATATCCTTGTCGAAGCCCTAGGTTGTGGTGGCCAACTGGACCTGGCCCGC AAGGTGTTCGGAGAAATGCGGGATGGCAACGCTGTTGCTCCTGATGTGTACACATACACG GTGATGATTAAGGCACTCTGCAGGGCTGGAGAGATTGATGCTGCTTTTGTGATGCTTGCG GAGTTGGAACGGTCTGGTATCCAGCCGACGGTTGTCACTTACAACGTGCTAATGGATGCA TTGTGCAGGAGTGGGAGGGTGGAAGAGGCCTTTCAGTTGAAGGGGAGAATGGTTGAAGGC AGGCTGAGACCAAGCATTGTCACATTTGGCATCCTGATCAATGGTCTTGCAAGGGGCCAA CGGTTTGGTGAGGTTGATGCAGTGCTGCAGGAGATGGAGGGTTTTGGGATCACCCCCAAT GAGGTTATTTACAATCAGCTGATCGGTTGGCATTGTAGGGAAGGACATTGCTCAGAGGCG CTTAGGCTGTTTGATGAAATGGTCTCAAAGGGGATAAAGCAGACAGTGGTGACTTACAAC TTGATTGCGAAGGCTCTGTGCAAGGAAGGAGAAATGGAACATGCTGAGCAGATATTGGAT GAGATGTTGTTGGCTGGAATGACGGTTCATTGCAGCTTGTTTAATAGTGTGGTTGCATGG CATCTTCGCGGAACTGGAAGACTGGATGTGGTGCTAAGGCTTATAAGAGAAATGGTTGCG AGATTTCTGAAACCAAATGATGCTGTGATGACAGCTTGTATCCAGGAGCTTTGCAAAAGA GGGAAACACGAAGAAGCAGCTGAAATTTGGTTCCTAGTATTGGGTAAAGGTTTGGGTGTC AATATTGCAACATCCAATGCGTTGATTCATGGGCTTTGCCAAGGTAACAACATGAAAGAA GCTACTAAGGTTCTAAAGGCTATGGTGGATAGCGGGGTTGAATTCGATAGAATCACATAT AATATAATGATTCAATTCTGCTGCAAAGCCAGTAAAATGGAGGAAGCAATACAACTTCGT GATGACATGATCAAAAGAGGGTTTAAGCCAGACCTCTTCACGTTTAATACTTTCCTACGC GCTTACTGTAATTTGGGTAAGGTGGAAGACATCCTTCACTTGCTGGATCAGATGAAAAGT GAGGGTCTTAAGCCAGATATTGTGACATATGGTACCATAATAGATGGTTACTGCAAAGCG AAGGATGTGCATAAGGCGAATAAATATTTGATTGAATTGATTAAAAATGGGTTAAGACCG AATGCAGTCATCTATAATGCTCTTATTGGTGGTTATGGTAGGAATGGTAGCATTTCTGAT GCAATTGGTGTTCTTGACACTATGAAGCATAATGGCATACAACCAACACCAATAACTTAC AACAGCCTTATGTATTGGATGTGTCATGCTGGTCTTGTTGAAGAGGCCAAAGAAATTTTC GCGCAATGTATACTAAAGAACATTGAGCTTGGTGTAATTGGCTACACAATTATAATACAA GGTTTTTGCAAAATAGGAAAAATTGATGAAGCTGTGATGTACTTTAAGGAAATGCATTAC AGGGATATACGTCCAAATAAGATGACCTACACCACTTTGATGTATGCCTATTGCAAATGT GGCAACAAAGAAGAAGCTTTCAAGCTTTTTGACGAGATGGTGAGCTCAGGCATTGTTCCT GATACTGTTTCTTACAATACACTAATTTCAGGGTGTTGTGAGGTGGATTCATTGGATAAG ATTGTAGAAAGTCCCGCTGAAATGTCCTCATGA

Peptide Sequence

PEP ID	Zm00001d043320_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:3:196441319:196446602:-1 gene:Zm00001d043320 transcript:Zm00001d043320_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	MKPPRLFPLLRRHLSSAADATADAAELSSALSVAPSSDAKRDLAILLRRLGGRGLASALS SLPAPLPASSALRLLQHILSDTHASASRHAEDLLSPRVSTLLLPSLVADGASLPSARRLI SRLLFFNPLSVAAAAIADSDCTATADLLVRACLNSPAPGSLSCAADAFLELSTRGASPSI KTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLA ELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQ RFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYN LIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVA RFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKE ATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLR AYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRP NAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIF AQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKC GNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS

Transcript Sequence

Transcript ID	Zm00001d043320_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:196441319:196446602:-1 gene:Zm00001d043320 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	AAGGCCGGCGGCGGCCACTGCCCGCCTTACACCATGAAACCACCACGGCTCTTTCCCCTC CTCCGCCGCCACCTCTCATCCGCCGCCGACGCCACCGCCGACGCCGCGGAGCTTTCCAGC GCGCTATCCGTGGCGCCCTCCTCAGATGCGAAACGCGATCTTGCCATCCTGCTCCGCCGC CTTGGCGGCCGCGGTCTCGCCTCCGCCCTCTCGTCCCTTCCGGCTCCGCTTCCCGCCTCC TCCGCCCTGCGCCTCCTTCAGCATATTCTCTCCGACACCCACGCGTCCGCCTCCCGCCAC GCCGAGGACCTCCTGTCTCCTCGCGTCTCTACGCTCCTCCTACCATCGCTCGTCGCCGAT GGCGCCTCGCTACCGTCCGCGCGCCGCCTCATCTCACGCCTCCTCTTCTTCAACCCTCTT TCTGTCGCCGCAGCGGCTATCGCGGACTCCGACTGCACTGCCACAGCGGACCTTCTCGTC CGCGCCTGCCTCAACTCGCCTGCCCCCGGATCTCTGTCCTGTGCCGCCGATGCCTTTCTC GAGCTTTCCACACGTGGTGCATCACCGTCCATCAAGACATGCAATATCCTTGTCGAAGCC CTAGGTTGTGGTGGCCAACTGGACCTGGCCCGCAAGGTGTTCGGAGAAATGCGGGATGGC AACGCTGTTGCTCCTGATGTGTACACATACACGGTGATGATTAAGGCACTCTGCAGGGCT GGAGAGATTGATGCTGCTTTTGTGATGCTTGCGGAGTTGGAACGGTCTGGTATCCAGCCG ACGGTTGTCACTTACAACGTGCTAATGGATGCATTGTGCAGGAGTGGGAGGGTGGAAGAG GCCTTTCAGTTGAAGGGGAGAATGGTTGAAGGCAGGCTGAGACCAAGCATTGTCACATTT GGCATCCTGATCAATGGTCTTGCAAGGGGCCAACGGTTTGGTGAGGTTGATGCAGTGCTG CAGGAGATGGAGGGTTTTGGGATCACCCCCAATGAGGTTATTTACAATCAGCTGATCGGT TGGCATTGTAGGGAAGGACATTGCTCAGAGGCGCTTAGGCTGTTTGATGAAATGGTCTCA AAGGGGATAAAGCAGACAGTGGTGACTTACAACTTGATTGCGAAGGCTCTGTGCAAGGAA GGAGAAATGGAACATGCTGAGCAGATATTGGATGAGATGTTGTTGGCTGGAATGACGGTT CATTGCAGCTTGTTTAATAGTGTGGTTGCATGGCATCTTCGCGGAACTGGAAGACTGGAT GTGGTGCTAAGGCTTATAAGAGAAATGGTTGCGAGATTTCTGAAACCAAATGATGCTGTG ATGACAGCTTGTATCCAGGAGCTTTGCAAAAGAGGGAAACACGAAGAAGCAGCTGAAATT TGGTTCCTAGTATTGGGTAAAGGTTTGGGTGTCAATATTGCAACATCCAATGCGTTGATT CATGGGCTTTGCCAAGGTAACAACATGAAAGAAGCTACTAAGGTTCTAAAGGCTATGGTG GATAGCGGGGTTGAATTCGATAGAATCACATATAATATAATGATTCAATTCTGCTGCAAA GCCAGTAAAATGGAGGAAGCAATACAACTTCGTGATGACATGATCAAAAGAGGGTTTAAG CCAGACCTCTTCACGTTTAATACTTTCCTACGCGCTTACTGTAATTTGGGTAAGGTGGAA GACATCCTTCACTTGCTGGATCAGATGAAAAGTGAGGGTCTTAAGCCAGATATTGTGACA TATGGTACCATAATAGATGGTTACTGCAAAGCGAAGGATGTGCATAAGGCGAATAAATAT TTGATTGAATTGATTAAAAATGGGTTAAGACCGAATGCAGTCATCTATAATGCTCTTATT GGTGGTTATGGTAGGAATGGTAGCATTTCTGATGCAATTGGTGTTCTTGACACTATGAAG CATAATGGCATACAACCAACACCAATAACTTACAACAGCCTTATGTATTGGATGTGTCAT GCTGGTCTTGTTGAAGAGGCCAAAGAAATTTTCGCGCAATGTATACTAAAGAACATTGAG CTTGGTGTAATTGGCTACACAATTATAATACAAGGTTTTTGCAAAATAGGAAAAATTGAT GAAGCTGTGATGTACTTTAAGGAAATGCATTACAGGGATATACGTCCAAATAAGATGACC TACACCACTTTGATGTATGCCTATTGCAAATGTGGCAACAAAGAAGAAGCTTTCAAGCTT TTTGACGAGATGGTGAGCTCAGGCATTGTTCCTGATACTGTTTCTTACAATACACTAATT TCAGGGTGTTGTGAGGTGGATTCATTGGATAAGATTGTAGAAAGTCCCGCTGAAATGTCC TCATGAGTTTTGGAACAAGGTGGTTGTTTGTCAACGTTTTTGATAATGGATAACTACACC CTGGAGCCAGAGAAGCTGTGTCTAGTGTTGAATTATGTGTAACCAAGGAAGATGTAAGAA AGGAGACTCAAACTTTGAGCTTGATATATCACCCTAATGTCATCAGGTCTTAGCGCTCAT TTGTTGTGGGTCAAAACCTTTGGGTAGTAGTGCTGTTCATGCTAGAAGGTTCATGTTTGC ACCAAATGAAGGTTGGATATCTGATGGTTTTGAGGAGCCAGTTATTGCCTCTATTCTAAA GGAAACACTCAAAGCTCTAGACTACCTCCATAGGCAAGGACATATTTTCACCATGATGTG AAGGCAGGATATCTTTATTGCCATCCCGGTGTAGTCAAGCTTGGGGACTTTGGTGTCTCT GCTTGCATGTTTGATAGGAGGCAAGGGGCTATGAATACATTTGTTGGAACACTGTGCTGG AATTAGGATGGCTCCAGAAGTTCTCCAGCTTCAAACTGGATATAATTTCAAGTATATGAG CTGATATGGTCTTTGGAATAACTGCACTGGAGGTGGCACATGGACATGCTCCCTTTTTGA AGTACCCTCCTATGAAGGTAATGGGTCATTTGGTCTTTGTAAATTAAGATTTTAAATCCT TTGTCCTTCTTGCTCTTATGGAATAGAGCAAGGTAATAATAGTTTCCAGGGAGCGTGGAT GGTTGATGATTAATTGCATCGGTTTTATTTTATTTTGAAATTTTTATGAAGTGGCTTATT TCAAAGTTAGATTGCAAGCATATGTGGTCTTAATCATTTTGCTATGGGCACACTAGAAAA AGAGAGAAATCCTCGAATTTCTCCCAAGGGCACACATTCTTGTGAATACTTATTTAGACT TGCTGATTGACACCAGCTTGCTGAACTATTATAGGCGTCAGATAGTTTTATCCATGGAGT TAACTATCTAACTTTACAAACTTTCTGGCAATAACTATTTCCATAAAGTTCACCTAATCA CGTGTGTGAATTCAGTGTTAACTGGTGATTTCCTTGGTGGCTCGGGTTCTTCTCATGACG CTCCAAAATGCTCTCCAAGTTGAATGCTTTCTGATTATAGTTTTCTGCCACAATCTTTCT ATTCTAGAATTCTGTTTCAGTCATTATTTATACAGAGTCTGGTCTTTAGGTTAGATTACC GTGGTTGCACTTCTAATGAAATTTTTTCACTTGTAAAGTTGTAATCAGTCTTTCAGGGAA ATGATTGCAATGTGCTTGGTGAAAGATCAAACAAAGGCCAACAGCCGATAAAATTAATTA AGCATTTTT