Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043309_T026
CDS Infomation

cds chromosome:B73_RefGen_v4:3:195743364:195749957:-1 gene:Zm00001d043309 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl hydrolase family protein
Sequence

ATGAAGGAAGCTGAAACAGTTGCTGCAAAAGTTGCTCTGATGTCCTTACCTCAAGAAGCA
AACCCAACACAGCAATTACTGCTTCCATCTGTAAACTATAAGAATCTTCTACAAGAACTA
GTTCAGAAGGAAGGCTTTCCCTTGCCTATCTATAATACAGCCTCGGATGTCTCGAACTAT
TCTGCTGCCTTCGTATCAACTGTGGAAATCCATGGTGTAACTTTTCATGGAAAGCCAGGG
AACACCAAAAAGCAAGCAGAGATGAATGCTGCAAAGTCTGCTTTTGAACATTTCAAAAAC
ATAAATCATGATGCTGGATCATCTGGCTCTGCTAACCCACTTCCTGTTGCCGCTACAAAA
CAGTCTGTTGATGGAAACACTCTACGTGCAAAGCTGGAAGTTAACAAATCACACCTTGCA
GAGCCAAGCACAGAAGTTGAAGCAATATATTCATCTACAGAAGTTGACAAACTGCCACTT
CCAGGGCCAAGCATGGATATCGAAGTAATGGACTCAACTCTTGAAGTTGACAAACTGCCC
CTTCCAGAGCGAAGCATGGATGTTAAAGTTGTGAATTCGTCTCTGAAAGTTGACAAACTG
CACTTTGCAGAGCCAATCACAGAAGCTGAAGTGATCCACTCATCTCTGCAAGTTGATGAA
CCGCTCATTCCAAAGCCAGGCATGAGCTCATCTCTAGAGAACACACCTGCTGTGAATGGC
CACTCAGCCCCCATATCCCCAACCATTACTCCTACTCTAATAAGCGTGCCAACAGCAACC
ATGCCTGTCAGCAATGACAGATGCGGTTGCTACATGTCAACCAACAGAATCCAAGTCTAC
CCTCGCCACACTGATATGGTTATCCCGGAAGGCGCGGCCGTGCTTCCCATCAGCGATAAT
CAGTGGGTAGCTGTCAGCCTACCTTATTCCATGGAACAAAGGGATTTCTGTTGCCGTAAT
CCGGACTGCCACTTAGGAAGATAA

Peptide Sequence

PEP ID

Zm00001d043309_P026
PEP Infomation

pep chromosome:B73_RefGen_v4:3:195743364:195749957:-1 gene:Zm00001d043309 transcript:Zm00001d043309_T026 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl hydrolase family protein
Sequence

MKEAETVAAKVALMSLPQEANPTQQLLLPSVNYKNLLQELVQKEGFPLPIYNTASDVSNY
SAAFVSTVEIHGVTFHGKPGNTKKQAEMNAAKSAFEHFKNINHDAGSSGSANPLPVAATK
QSVDGNTLRAKLEVNKSHLAEPSTEVEAIYSSTEVDKLPLPGPSMDIEVMDSTLEVDKLP
LPERSMDVKVVNSSLKVDKLHFAEPITEAEVIHSSLQVDEPLIPKPGMSSSLENTPAVNG
HSAPISPTITPTLISVPTATMPVSNDRCGCYMSTNRIQVYPRHTDMVIPEGAAVLPISDN
QWVAVSLPYSMEQRDFCCRNPDCHLGR

Transcript Sequence

Transcript ID

Zm00001d043309_T026
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:195743364:195749957:-1 gene:Zm00001d043309 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl hydrolase family protein
Sequence

GGGCGTATTCCTCTCTCTTTCCTCAACCTCATCCGAGTGGCTCTCCGTGTGCTGTGGCGG
CGGCGGCGCCCGGCTCTGCTCGGACGGACTCCACCGAAGGCTCGGCTCCCCTCGGACTCC
ACCTGCGACGGCCGGCCCTCTGCCTGCACCGACGGTGCCCGGCTCCCTCGGCATCCACCA
GCGGTGCCCGACTCCAAGAAATGTACAAGTCACGGCTGCAGGAGCTGTGCCAGAAGCGGC
GATGGGCGCCGCCGTTGTACGAGCCTACCCGAGAGGGTCCTGCCCACGCGCCCCTCTTCC
GCGCCACTGTCGTCGTGAATGGCGAGAGGTTCAGTTCCCGGGATGAAGGGGAGAAGTCAC
TCAAGGAGGCGTACAACCTCGCGGCGATGGCCGCCTTCGACAACCTCATCGCGCTCCCGG
CCGCGGCCCTTGCCCCTGCCCCGGCTGCTCCAGCGCCGCCCTCATCCGGTGAGCTGCCAG
CTTGTCCCCTGGGACCAAATATGCACTGTTAGATCATGAACCTCCGTGGGAAAAAACAAA
AAAAATTATCTTATTTTTCTTTCGAAAAACACCATGTTTTCATAAAAAAACAATTGAAAA
TAGTTTCTTTCCCTGGATGATGGTGTGCTAGCATTGGATTTTCGCACCCTTGTCGTTCTG
AGTTCCTTACCAGTTACATTTAATTATTTGGAGGTGGCGTGGGTGCTTGTATGGTATGGG
TAGGAATCACTCCAAGGTTTAAGCATCTGCCTACCTTTTGAAATTAATCTTACCAGATGA
ACTGAAGAAGAGTTGAACTTATTAGCAATCCAAGTATTTACAGGTGAATTTTACTAACAT
TATTCTTGGAACAGTGGAATTGACCCCTATATTTATAATAAATTAATAATACTAGTTCAA
AGTTAGATTCATAGGAAGCATTCATGCAGGTAGATAGGCTCACCAGCACACTTTACTCTT
TGATTTTGTATTGATTGCACTTGATTTCGCACCCTTATTATCGATTTGAGTTCCGTATGA
GTTACATTTAGTTGTTTCGAGGTGGTGCGGGTGCTTGAATCAGTAGGAACCCTCCAAGGT
GTAAGCATCTCCTTATCTTTTGAAATTAATCTTACCAGTTGAACTGAAGAAGACTTGAAC
TTATTAGCAATCCAAGTATTTACAGGTGAATGTTACTAGCATTATTGTTCCAATAGAGGA
AAATGACCCCTCTTTTTGTAATGCTACTAGTGCAATGGTAGTATTGCTAGGAAGCATTCA
TGTAAGTAGGTAGGTAGGTTAAGGGCCTGTTTGGAACCACCAAATTTTTAAGAAACTGGT
TTATGGAAATTGAGGTGGTTCCAAACATACCAGTTTATGCCTCAGTTTATAGAAATTGGA
TTCACAGTTTCTTAAAAACCAAGAAGCTAGTCTCTCCTAGCTAAAAAATAAAAATTGATT
TCTTAAAAACCGGGTTGCTTCTAAACAGGACCTAACCAGCACACTTTACTCTCTGTTTTT
TTATTGGTTGCACGTGATTTTGCAAGGGCATCATGCAATTTTTGTAGCTAGTGGACCTCG
AAATAATATTCTGGTTGTGTATAATGGATATAGCAGAAGTACCATGTGAGTCAATGTCTA
CATAATAATCTGCTAAGAGGTCATCTCGAACTCATTTAAGAAATGCAGGAGAAGAAACTG
TCTGTAGGTTTAGCAAATCGGTTACGCGATTGCATCTTAGGACTATTCATCATATGATCC
ATATGTCATTCCTGGAAAGTTGTTATTATTTTCTATTTTTAAGTTTTGATTAGTTGATTT
GTCGTTTACTTATATCTCTATATTTATTCTCTCAAGCTATAAAGATAATTTTTCTTCATG
CAGTAAGTGTTTTTCACTCATCTAAAAGAGGAAACTTTCTTTTTGCTTTACCTGTCACAC
TCTATTCTTTTTTTATGTAGAGACCCAGCTTCCTTACAAGAGTCAGTTACAAATTTATGC
TCAGAAGCGAGGCAAACTCCTGCCTTCATATCGTCCCATTCATGGAGGTTCTCTTCATGC
ACCTCTATTTAAGTCAGAAGTAACCATAGATGGTCAAACATTTGAGAGCCCAGAGTACTG
TCACACAATGAAGGAAGCTGAAACAGTTGCTGCAAAAGTTGCTCTGATGTCCTTACCTCA
AGAAGCAAACCCAACACAGCAATTACTGCTTCCATCTGTAAACTATAAGAATCTTCTACA
AGAACTAGTTCAGAAGGAAGGCTTTCCCTTGCCTATCTATAATACAGCCTCGGATGTCTC
GAACTATTCTGCTGCCTTCGTATCAACTGTGGAAATCCATGGTGTAACTTTTCATGGAAA
GCCAGGGAACACCAAAAAGCAAGCAGAGATGAATGCTGCAAAGTCTGCTTTTGAACATTT
CAAAAACATAAATCATGATGCTGGATCATCTGGCTCTGCTAACCCACTTCCTGTTGCCGC
TACAAAACAGTCTGTTGATGGAAACACTCTACGTGCAAAGCTGGAAGTTAACAAATCACA
CCTTGCAGAGCCAAGCACAGAAGTTGAAGCAATATATTCATCTACAGAAGTTGACAAACT
GCCACTTCCAGGGCCAAGCATGGATATCGAAGTAATGGACTCAACTCTTGAAGTTGACAA
ACTGCCCCTTCCAGAGCGAAGCATGGATGTTAAAGTTGTGAATTCGTCTCTGAAAGTTGA
CAAACTGCACTTTGCAGAGCCAATCACAGAAGCTGAAGTGATCCACTCATCTCTGCAAGT
TGATGAACCGCTCATTCCAAAGCCAGGCATGAGCTCATCTCTAGAGAACACACCTGCTGT
GAATGGCCACTCAGCCCCCATATCCCCAACCATTACTCCTACTCTAATAAGCGTGCCAAC
AGCAACCATGCCTGTCAGCAATGACAGATGCGGTTGCTACATGTCAACCAACAGAATCCA
AGTCTACCCTCGCCACACTGATATGGTTATCCCGGAAGGCGCGGCCGTGCTTCCCATCAG
CGATAATCAGTGGGTAGCTGTCAGCCTACCTTATTCCATGGAACAAAGGGATTTCTGTTG
CCGTAATCCGGACTGCCACTTAGGAAGATAAAAGCAGACAAAAGGATGGATGCTTTGTGA
TGATTATATAGCTTGTGATGCTGAGCATTGCCCGTGATGTACTAAAATCTAGTGTAACAA
GACTGCCTTGCGCTGGACTACGATTAGTGTCCCTAATGCGGAGACTTGTGTGACTCCTAT
TGTATCTAGATTAAGCTGTACTTGTTTGACTATGTGCGGAAGTCTTGAGTTACACTCCTA
TAGTAGAGGACTTGAACTCTGGATGGACCATCCGCAACATTTATCATGATCAGACTTTTT