Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043288_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:3:194545036:194547476:-1 gene:Zm00001d043288 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vps51/Vps67 family (components of vesicular transport) protein
Sequence

ATGCCTGCGGCGGCCGTTCCCGGAGGCGGTGGCGCCGCCGACGCCGAGGAGCTGTTCCGC
ACCAAGCGCATCCCGGAGATTCGTGCGGCTGAGGGCGCCACCCGACGCGAGATCTCCGCC
AAGGAGGAGGAGCTCAGACAGCTCGTCGGGCGCAGCTACCGCGACCTGCTCGACTCCGCG
GACTCCATCCTCCTCATCAAGCAGTCCTCCGATGTCATATCCGACAACCTCGCCCGCATC
TCTGGCTCCTTGTCGTCGCTCTCGCCGCCCCATGAACCCTCTCCCGCCGTAAGCGCCGCC
TCGCCGTCTCCGTCTGCTGGAGGGCGCGCGAGGCTGTACTCGCTGGCCGCGCGCGCCAAG
TACCTTGTTGACACGCCGGAGCACATATGGGGTCGGCTCGATGAGGGCCTGCTCCTTGAG
GCGGCGGGGCGGTACCTTCGGGCGCAGGTCGTACACGGGCGGCTCTCCCGCGACGCCACG
GCCGCCGCGCGGTTCCCTCTCCTCGCGCACCAGGCGCAGCTCGTGGAGGCGTTCCGGCCG
CAGATCTCCCAGCGCGCGCGCGAGCGCCTCGCCGACCGCCGCCTCCCCGTAGCGGCCCAC
GCTGACGCGCTTGCCGCCGTGGCCGCTATTGACTCCCCCTCGCTTGCCCCGGCCCAGGCT
CTCCTCCTCTTCCTCACCTCGCGCCGCGCTTGGATCTCCCAAGCCCTAGCTGGGCTCGCC
TCGGATCTGTCATCATACACCTCTGTGCTGTGCGATATCGCGAGGATCGTGCGGATCACG
CTTGGCCACGTTGGACAGTTGTTTGTGCCTGCACTCAGTGATATGCCGTTGTTCTTCAAG
ACGGTGCTTGAGAAGACGCCGCCTGAGCAGTTGTTCGGTGGCATTCCGGACCCTGATGAT
GAAGCACGGTTGTGGAAGGAGCACATGAACCAGCTTGAGGCTACAATGGTGCTGCTCGAG
GCAGATGCCATTGCAGGGGCCTGTACGGATTGGCTCAAGGAATGTTGCACTAAAATTTTT
GGTGTGATTGCTGGTGAGCAGAAGTTGGTTGATGCCATTGGGAGTGGGGAGCTGCTTGGA
TCAGTGCAAAGGCTTGTACGTGAAGCACTAGATGGGAGGGACGGATTGGAGGGAAGTTTG
GAGCAGTGGCTGAAGAGCGTCTTTGGGTCAGATATTGAGTCGCCATGGGATCAGATCCAT
GGGTTGATCTTGAAGGACGGCAAAGATATTTTTGAGGATTGGATGGAGGAAGCATTTGTG
CGACGGATGAAGGACATTGTGCATTCAGAGCTTGATAGATTGGGTGCTAGTGTTAACGTG
AAGGAATTAGTTCATGCTATTGGTGCCAATGCTGATCCAAAGGATGCTGGAGATTTTCTT
GCCTACCTGCGGAAATCTTCTAAGGGTGGTGGTTTCTGGTTCTCAGAGTCTAAGATAAAG
AAAGGCGGAGTTTTGGCACACTTGAAACCAATTGCTGATGAAAATGATTTCCATAGTTGC
CTAACATTGTATTTTGGGCCAGAAGTTAGTCGGATCAGGAGTGCAATTGACAGTAAATGC
AAGAATATCCTGGATGATCTGTTAAGCTTTGTGGAGTCACATAATTCAGCCCCAAGGCTG
AAGGAGTTGGTGCCATACCTCCAGGAGAAATGCTACAGGACCATCTCGGGAGTATTGAAA
GAATTAGAAGCTGAGCTCAGAAAGCTTTCTGCTCTGTTGGGAACCAAAAAGGAGGGTAAC
GACATACCTGCAGCTTCTATTATAGCGGAGAGGTCTCTCTTCATTGGTCGAATCTTGTTT
GCCCTGAGATACTATTCAAGTCATGTACCCCTGATACTAGGTTCCCCAAGGGAGTGGGTA
AAGGAGGCTGGTGGTGCAGCATTTGCCAGGCTATCATCACCTACACCAAGACATTCAAGT
ACCTTTTACATCGAGAAGGCGCACATTTGA

Peptide Sequence

PEP ID

Zm00001d043288_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:3:194545036:194547476:-1 gene:Zm00001d043288 transcript:Zm00001d043288_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vps51/Vps67 family (components of vesicular transport) protein
Sequence

MPAAAVPGGGGAADAEELFRTKRIPEIRAAEGATRREISAKEEELRQLVGRSYRDLLDSA
DSILLIKQSSDVISDNLARISGSLSSLSPPHEPSPAVSAASPSPSAGGRARLYSLAARAK
YLVDTPEHIWGRLDEGLLLEAAGRYLRAQVVHGRLSRDATAAARFPLLAHQAQLVEAFRP
QISQRARERLADRRLPVAAHADALAAVAAIDSPSLAPAQALLLFLTSRRAWISQALAGLA
SDLSSYTSVLCDIARIVRITLGHVGQLFVPALSDMPLFFKTVLEKTPPEQLFGGIPDPDD
EARLWKEHMNQLEATMVLLEADAIAGACTDWLKECCTKIFGVIAGEQKLVDAIGSGELLG
SVQRLVREALDGRDGLEGSLEQWLKSVFGSDIESPWDQIHGLILKDGKDIFEDWMEEAFV
RRMKDIVHSELDRLGASVNVKELVHAIGANADPKDAGDFLAYLRKSSKGGGFWFSESKIK
KGGVLAHLKPIADENDFHSCLTLYFGPEVSRIRSAIDSKCKNILDDLLSFVESHNSAPRL
KELVPYLQEKCYRTISGVLKELEAELRKLSALLGTKKEGNDIPAASIIAERSLFIGRILF
ALRYYSSHVPLILGSPREWVKEAGGAAFARLSSPTPRHSSTFYIEKAHI

Transcript Sequence

Transcript ID

Zm00001d043288_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:194545036:194547476:-1 gene:Zm00001d043288 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vps51/Vps67 family (components of vesicular transport) protein
Sequence

GCCTCTCACTAGTCAGTCTCTCCCCCACCCGTCCCTCCCGATCCTCTCTTGGATCTCGCC
GCGCGCCCGAAGGCGAGCGGGGCCGCGATGCCTGCGGCGGCCGTTCCCGGAGGCGGTGGC
GCCGCCGACGCCGAGGAGCTGTTCCGCACCAAGCGCATCCCGGAGATTCGTGCGGCTGAG
GGCGCCACCCGACGCGAGATCTCCGCCAAGGAGGAGGAGCTCAGACAGCTCGTCGGGCGC
AGCTACCGCGACCTGCTCGACTCCGCGGACTCCATCCTCCTCATCAAGCAGTCCTCCGAT
GTCATATCCGACAACCTCGCCCGCATCTCTGGCTCCTTGTCGTCGCTCTCGCCGCCCCAT
GAACCCTCTCCCGCCGTAAGCGCCGCCTCGCCGTCTCCGTCTGCTGGAGGGCGCGCGAGG
CTGTACTCGCTGGCCGCGCGCGCCAAGTACCTTGTTGACACGCCGGAGCACATATGGGGT
CGGCTCGATGAGGGCCTGCTCCTTGAGGCGGCGGGGCGGTACCTTCGGGCGCAGGTCGTA
CACGGGCGGCTCTCCCGCGACGCCACGGCCGCCGCGCGGTTCCCTCTCCTCGCGCACCAG
GCGCAGCTCGTGGAGGCGTTCCGGCCGCAGATCTCCCAGCGCGCGCGCGAGCGCCTCGCC
GACCGCCGCCTCCCCGTAGCGGCCCACGCTGACGCGCTTGCCGCCGTGGCCGCTATTGAC
TCCCCCTCGCTTGCCCCGGCCCAGGCTCTCCTCCTCTTCCTCACCTCGCGCCGCGCTTGG
ATCTCCCAAGCCCTAGCTGGGCTCGCCTCGGATCTGTCATCATACACCTCTGTGCTGTGC
GATATCGCGAGGATCGTGCGGATCACGCTTGGCCACGTTGGACAGTTGTTTGTGCCTGCA
CTCAGTGATATGCCGTTGTTCTTCAAGACGGTGCTTGAGAAGACGCCGCCTGAGCAGTTG
TTCGGTGGCATTCCGGACCCTGATGATGAAGCACGGTTGTGGAAGGAGCACATGAACCAG
CTTGAGGCTACAATGGTGCTGCTCGAGGCAGATGCCATTGCAGGGGCCTGTACGGATTGG
CTCAAGGAATGTTGCACTAAAATTTTTGGTGTGATTGCTGGTGAGCAGAAGTTGGTTGAT
GCCATTGGGAGTGGGGAGCTGCTTGGATCAGTGCAAAGGCTTGTACGTGAAGCACTAGAT
GGGAGGGACGGATTGGAGGGAAGTTTGGAGCAGTGGCTGAAGAGCGTCTTTGGGTCAGAT
ATTGAGTCGCCATGGGATCAGATCCATGGGTTGATCTTGAAGGACGGCAAAGATATTTTT
GAGGATTGGATGGAGGAAGCATTTGTGCGACGGATGAAGGACATTGTGCATTCAGAGCTT
GATAGATTGGGTGCTAGTGTTAACGTGAAGGAATTAGTTCATGCTATTGGTGCCAATGCT
GATCCAAAGGATGCTGGAGATTTTCTTGCCTACCTGCGGAAATCTTCTAAGGGTGGTGGT
TTCTGGTTCTCAGAGTCTAAGATAAAGAAAGGCGGAGTTTTGGCACACTTGAAACCAATT
GCTGATGAAAATGATTTCCATAGTTGCCTAACATTGTATTTTGGGCCAGAAGTTAGTCGG
ATCAGGAGTGCAATTGACAGTAAATGCAAGAATATCCTGGATGATCTGTTAAGCTTTGTG
GAGTCACATAATTCAGCCCCAAGGCTGAAGGAGTTGGTGCCATACCTCCAGGAGAAATGC
TACAGGACCATCTCGGGAGTATTGAAAGAATTAGAAGCTGAGCTCAGAAAGCTTTCTGCT
CTGTTGGGAACCAAAAAGGAGGGTAACGACATACCTGCAGCTTCTATTATAGCGGAGAGG
TCTCTCTTCATTGGTCGAATCTTGTTTGCCCTGAGATACTATTCAAGTCATGTACCCCTG
ATACTAGGTTCCCCAAGGGAGTGGGTAAAGGAGGCTGGTGGTGCAGCATTTGCCAGGCTA
TCATCACCTACACCAAGACATTCAAGTACCTTTTACATCGAGAAGGCGCACATTTGACAG
TCCCAAGAGTCCTGGAAGGCAATTCTCGGATAGCCCCAGAAGACAAACTATTGCTGCTGC
AGTATCTTTGTTTGGAGCTGATGATAGATCCAATCCTAGACTTGATGAACTCAATAAGAC
CATGCAGTCACTTTGCATCATGGCTCATAATGTATGGATAACATGGGTGTCCACCGAATT
ATCTCACATTCTTTCATATGATATCAGCAAAGATGATTCACTATCCTCTTCGACTCCTTT
GAGGGTACACCTCTGAACCTGCTCGCAGTTCCGATATCTTTTAGTGTATAGTACATTGTA
GTTTTTGAATATACATGACTGCATTTTATTTGGTTTGGAAAACTTAAGTAGATTCACATG
TATAATAACCTAGCATATAGG