Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043274_T020
CDS Infomation

cds chromosome:B73_RefGen_v4:3:194032430:194090952:-1 gene:Zm00001d043274 gene_biotype:protein_coding transcript_biotype:protein_coding description:Insulin-degrading enzyme-like 1 peroxisomal
Sequence

ATGCTATTTTATGCCAGCGAGAAGTATCCTGGAGAACATGAATATACGAAATATATCATA
GAGCATGGTGGCTCTTACAATGCATATACAAGCTCCGAGACAACGAATTTCTTTTTCGAT
GTCAATGTGGACAATTTTGAAGAAGCCTTAGATAGATTTGCTCAGTTCTTCATTAAGCCA
TTGATGTCACAGGATGCTGTTCTTAGAGAGATAAAAGCTGTGGATTCTGAGAACACAAGA
AAAATTTGTTGTCTGATGGCTGGAGGATGTATCAGCTTCAATTTCATTCTTTTTTCCTCT
CAGCTTCAAAAGCATTTTGCTTCAAAGGATCACCCTTACCACAAATTCAGTACAGGAAGT
TGGGAAACACTAGAAACTAAACCAAAAGCGAGGGGCCTGGATATCAGACTTGAACTTCTG
AAGTTTTACAAGAATTATTCAGCAAACGTTATGCACCTTGTTGTTTATGGAAAGGAGAAC
CTCGATTGCATTCAGGGCTTGGTTGAGCGTATGTTTAGTGACATAAAAAACACTGATCAG
AGAAGCTTGAAATGTCCAAGTCATCCTCTTTCAGAGGAACATTTACAGCTTCTTGTCAAA
GCACTGCCAATAGTAGAAGGGGACTATCTAAGAATTATATGGCCAATAACACCTAGCATC
CAGTTTTACAAAGAAGCTCCTTGCCATTATCTGAGTCACCTCATTGGACATGAAGGCGAG
GGGTCCATCTTCCATATTATAAAGGAACTAGGATGGGCCATGAACTTAATGGCTGGAGAG
TGCAGTGACAGTAATGAGTATTCCTTTTTCTCAGTAAGCATGAGGCTCACTGATGCTGGC
CATGAACGCATGGAGGATATTGTTGGGTTGATCTTCAAATATCTTCATCTATTAAAAGAA
GACGGAGTCCATGAGTGGATATTTAATGAGCTTGCGGCGATAAATGAAATGGAGTTCCAT
TATCAAGACAAAGTCCGCCCAATCAACTATGTGATGCGCACTGTCTCAACTATGCGGTTG
TTCCCACCAGAAGAATGGTTGGTTGGAGCAGCATTACCATCAAAGTATGCATCACAGAGA
ATAAATATGATACTCAATCAACTAATACCTGAAACAGTAAGAATATTCTGGGAGTCCAAA
AAATTTGAAGGATCTACGAGTTCTGCTGAGCCCTGGTATAACACACCATTTTCAGTTGAA
AATGTCACTCCTTCAGTTATACAGGAATGGATTGAAAAAGCTCCTACTGAAAAACTCCAT
CTTCCAAAACCTAATATTTTCATACCAAAGGATTTATCTCTTAAAGAAGTGCATGAAAAG
GTTACTTTTCCAACAGTGTTAAGGAAGAGCCCACTTTCACAGTTGTGGTATAAGCCTGAT
ATGCTGTTCTCCACACCAAAGGTTCACATTATCATTGATTTCCACTGTCCATTATCCAGC
CACTCCCCTGAAGCAGTTGTTGCTACTGAGCTCTTTGTTGATTTGTTAGTAGATTATTTG
AATGCTTATGCTTATGATGCTCAAATTGCTGGTTTATTCTATTCAATATATGTTACTTCA
GCTGGATTCCAGGTTTCTTTAGGTGGTTACAATGACAAGATGAGAGTTCTCTTAAATGCC
ATACTAGTGCAAATTGTGAAATTTGAAGTTAAGCCAAACAGATTTTCTGCACTGAAGGAA
ACTTCTGTCAAGGACTACCAGAATTTCAATTTCCGACAACCTTATTCTCAAGCGTCATAC
TATGTCTCTTTGATATTGGGAGATAAAAAATGGCCTGTAGCTGAGAAACTTGAAGCTCTT
TCTAAGCTTGAATCAGATTATTTTGCAAAGTTCGTACCACACCTACTGTCAAAAACATTT
TTGGAATGTTATGTTCAAGGGAACATTGAACCAAGTGAAGCAAAATCTATCGTAGAAGAA
ATCGAAAACACTATATTTACTACGCCCAATTCTTTGTTCAAATCCATGTCTCCATCAGAA
TATCTGATTAAAAGGGTCATCATGCTTGAAAATGACTTGAAATGCTACTACCAAACTGAG
GGATTAAACCAGAAGAATGAGAATTCATCAGTTATCCAATATATTCAGGTGCATCAAGAT
GACGCCATTTTGAATATCAAACTTGAGCTGTTCTCTCTAATAGCAAAACAGCCAGCCTTC
AACCAGCTACGAACTGTTGAACAACTTGGGTATATAACAAGTCTTTCTCTGAGATCCGAC
TATGGAGTCCTGGCACTCCAGGTTGTTATCCAGTCCACAGTAAAGGATCCTTCATACCTC
GATGTTAGAGTTGATGAGTTCTTTAAGATGTTTGAAAGCAAAATCTATGAACTCTCCGAC
AAGGATTTCAAGAGAAATGTGAAATCATTAATTGATTCTAAACTGGAGAAGTTTAAAAAC
TTATGGGAGGAATCTCATTTCTACTGGGGAGAGATTGAGGCAGGAACTCTGAAGTTTGAT
AGGGTCGAGTCTGAGGTCGCTATGCTAAGAGAGCTCAAGAAAGAAGAATTCATCGAGTAC
TTCAACCAGTATATAAAAGTGGACGCGCCTCAAAGGAGGACACTAAGCGTGCAAGTCTTC
GGCGGCAACCATTTGGTAGAGTTCAAGAAGGCAATCAACGAAGCCAACCCGCCCAAAATG
TACAGAATTACAGACATATTCGGCTTCAAACGATCGAGGCCGCTGTACAGCTCACTCAAG
GGAGGTCCGGGCAGGATCACCATGGACTGA

Peptide Sequence

PEP ID

Zm00001d043274_P020
PEP Infomation

pep chromosome:B73_RefGen_v4:3:194032430:194090952:-1 gene:Zm00001d043274 transcript:Zm00001d043274_T020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Insulin-degrading enzyme-like 1 peroxisomal
Sequence

MLFYASEKYPGEHEYTKYIIEHGGSYNAYTSSETTNFFFDVNVDNFEEALDRFAQFFIKP
LMSQDAVLREIKAVDSENTRKICCLMAGGCISFNFILFSSQLQKHFASKDHPYHKFSTGS
WETLETKPKARGLDIRLELLKFYKNYSANVMHLVVYGKENLDCIQGLVERMFSDIKNTDQ
RSLKCPSHPLSEEHLQLLVKALPIVEGDYLRIIWPITPSIQFYKEAPCHYLSHLIGHEGE
GSIFHIIKELGWAMNLMAGECSDSNEYSFFSVSMRLTDAGHERMEDIVGLIFKYLHLLKE
DGVHEWIFNELAAINEMEFHYQDKVRPINYVMRTVSTMRLFPPEEWLVGAALPSKYASQR
INMILNQLIPETVRIFWESKKFEGSTSSAEPWYNTPFSVENVTPSVIQEWIEKAPTEKLH
LPKPNIFIPKDLSLKEVHEKVTFPTVLRKSPLSQLWYKPDMLFSTPKVHIIIDFHCPLSS
HSPEAVVATELFVDLLVDYLNAYAYDAQIAGLFYSIYVTSAGFQVSLGGYNDKMRVLLNA
ILVQIVKFEVKPNRFSALKETSVKDYQNFNFRQPYSQASYYVSLILGDKKWPVAEKLEAL
SKLESDYFAKFVPHLLSKTFLECYVQGNIEPSEAKSIVEEIENTIFTTPNSLFKSMSPSE
YLIKRVIMLENDLKCYYQTEGLNQKNENSSVIQYIQVHQDDAILNIKLELFSLIAKQPAF
NQLRTVEQLGYITSLSLRSDYGVLALQVVIQSTVKDPSYLDVRVDEFFKMFESKIYELSD
KDFKRNVKSLIDSKLEKFKNLWEESHFYWGEIEAGTLKFDRVESEVAMLRELKKEEFIEY
FNQYIKVDAPQRRTLSVQVFGGNHLVEFKKAINEANPPKMYRITDIFGFKRSRPLYSSLK
GGPGRITMD

Transcript Sequence

Transcript ID

Zm00001d043274_T020
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:194032430:194090952:-1 gene:Zm00001d043274 gene_biotype:protein_coding transcript_biotype:protein_coding description:Insulin-degrading enzyme-like 1 peroxisomal
Sequence

GTCCGTGCAGACCTTTATGTGCTGACTGCAGCGAGTGGAGCACATGCTATTTTATGCCAG
CGAGAAGTATCCTGGAGAACATGAATATACGAAATATATCATAGAGCATGGTGGCTCTTA
CAATGCATATACAAGCTCCGAGACAACGAATTTCTTTTTCGATGTCAATGTGGACAATTT
TGAAGAAGCCTTAGATAGATTTGCTCAGTTCTTCATTAAGCCATTGATGTCACAGGATGC
TGTTCTTAGAGAGATAAAAGCTGTGGATTCTGAGAACACAAGAAAAATTTGTTGTCTGAT
GGCTGGAGGATGTATCAGCTTCAATTTCATTCTTTTTTCCTCTCAGCTTCAAAAGCATTT
TGCTTCAAAGGATCACCCTTACCACAAATTCAGTACAGGAAGTTGGGAAACACTAGAAAC
TAAACCAAAAGCGAGGGGCCTGGATATCAGACTTGAACTTCTGAAGTTTTACAAGAATTA
TTCAGCAAACGTTATGCACCTTGTTGTTTATGGAAAGGAGAACCTCGATTGCATTCAGGG
CTTGGTTGAGCGTATGTTTAGTGACATAAAAAACACTGATCAGAGAAGCTTGAAATGTCC
AAGTCATCCTCTTTCAGAGGAACATTTACAGCTTCTTGTCAAAGCACTGCCAATAGTAGA
AGGGGACTATCTAAGAATTATATGGCCAATAACACCTAGCATCCAGTTTTACAAAGAAGC
TCCTTGCCATTATCTGAGTCACCTCATTGGACATGAAGGCGAGGGGTCCATCTTCCATAT
TATAAAGGAACTAGGATGGGCCATGAACTTAATGGCTGGAGAGTGCAGTGACAGTAATGA
GTATTCCTTTTTCTCAGTAAGCATGAGGCTCACTGATGCTGGCCATGAACGCATGGAGGA
TATTGTTGGGTTGATCTTCAAATATCTTCATCTATTAAAAGAAGACGGAGTCCATGAGTG
GATATTTAATGAGCTTGCGGCGATAAATGAAATGGAGTTCCATTATCAAGACAAAGTCCG
CCCAATCAACTATGTGATGCGCACTGTCTCAACTATGCGGTTGTTCCCACCAGAAGAATG
GTTGGTTGGAGCAGCATTACCATCAAAGTATGCATCACAGAGAATAAATATGATACTCAA
TCAACTAATACCTGAAACAGTAAGAATATTCTGGGAGTCCAAAAAATTTGAAGGATCTAC
GAGTTCTGCTGAGCCCTGGTATAACACACCATTTTCAGTTGAAAATGTCACTCCTTCAGT
TATACAGGAATGGATTGAAAAAGCTCCTACTGAAAAACTCCATCTTCCAAAACCTAATAT
TTTCATACCAAAGGATTTATCTCTTAAAGAAGTGCATGAAAAGGTTACTTTTCCAACAGT
GTTAAGGAAGAGCCCACTTTCACAGTTGTGGTATAAGCCTGATATGCTGTTCTCCACACC
AAAGGTTCACATTATCATTGATTTCCACTGTCCATTATCCAGCCACTCCCCTGAAGCAGT
TGTTGCTACTGAGCTCTTTGTTGATTTGTTAGTAGATTATTTGAATGCTTATGCTTATGA
TGCTCAAATTGCTGGTTTATTCTATTCAATATATGTTACTTCAGCTGGATTCCAGGTTTC
TTTAGGTGGTTACAATGACAAGATGAGAGTTCTCTTAAATGCCATACTAGTGCAAATTGT
GAAATTTGAAGTTAAGCCAAACAGATTTTCTGCACTGAAGGAAACTTCTGTCAAGGACTA
CCAGAATTTCAATTTCCGACAACCTTATTCTCAAGCGTCATACTATGTCTCTTTGATATT
GGGAGATAAAAAATGGCCTGTAGCTGAGAAACTTGAAGCTCTTTCTAAGCTTGAATCAGA
TTATTTTGCAAAGTTCGTACCACACCTACTGTCAAAAACATTTTTGGAATGTTATGTTCA
AGGGAACATTGAACCAAGTGAAGCAAAATCTATCGTAGAAGAAATCGAAAACACTATATT
TACTACGCCCAATTCTTTGTTCAAATCCATGTCTCCATCAGAATATCTGATTAAAAGGGT
CATCATGCTTGAAAATGACTTGAAATGCTACTACCAAACTGAGGGATTAAACCAGAAGAA
TGAGAATTCATCAGTTATCCAATATATTCAGGTGCATCAAGATGACGCCATTTTGAATAT
CAAACTTGAGCTGTTCTCTCTAATAGCAAAACAGCCAGCCTTCAACCAGCTACGAACTGT
TGAACAACTTGGGTATATAACAAGTCTTTCTCTGAGATCCGACTATGGAGTCCTGGCACT
CCAGGTTGTTATCCAGTCCACAGTAAAGGATCCTTCATACCTCGATGTTAGAGTTGATGA
GTTCTTTAAGATGTTTGAAAGCAAAATCTATGAACTCTCCGACAAGGATTTCAAGAGAAA
TGTGAAATCATTAATTGATTCTAAACTGGAGAAGTTTAAAAACTTATGGGAGGAATCTCA
TTTCTACTGGGGAGAGATTGAGGCAGGAACTCTGAAGTTTGATAGGGTCGAGTCTGAGGT
CGCTATGCTAAGAGAGCTCAAGAAAGAAGAATTCATCGAGTACTTCAACCAGTATATAAA
AGTGGACGCGCCTCAAAGGAGGACACTAAGCGTGCAAGTCTTCGGCGGCAACCATTTGGT
AGAGTTCAAGAAGGCAATCAACGAAGCCAACCCGCCCAAAATGTACAGAATTACAGACAT
ATTCGGCTTCAAACGATCGAGGCCGCTGTACAGCTCACTCAAGGGAGGTCCGGGCAGGAT
CACCATGGACTGACAGCCGGCAATAGCATGCCTTGTTTTTCATGTATGTAGTGTAATGGC
CAGTGCATACGAATGATGAATTCGATTCTGAATCCTGCTCCTGCATCAGATTCGGTTGCA
TGATTG