Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043269_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:193860001:193860642:-1 gene:Zm00001d043269 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 28 homolog 2
Sequence

ATGGAGGTGAAGTTGTGGAACGACAAGCGCGAGCGGGAGCTCCTGGAGAGCTACGCGGAC
CTGTACGCGATCATCAAGGCCGTGGAGAAGCTGGAACGGGCCTACGTCCGGGACCTCGTC
TCAGCCGCCGACTACGAGGCGGAGTGCCTCAAGCTTATCTCCCAGTTCAACTCCCTCTCC
TCCTCGCTCGCCGGCGCCGTCACCGTCCCTCGCTTCGTCCAGGCGTACCGCCTCGATTGC
CCCGCCGCGCTCAACCGCCTCCTCCAGTCGGGCGTCCCGGCCACCGTCGAGCTCCGCGCC
GCGTCCGCCTCATCCGCGCCGGCCGCCACCGCCGCCTCCGCGTCAGCCATCGCGCACTGC
GTGCAGACCTTCATCACCGCCATGGACGCCGTCAAGCTCAACATGCTTGCCAACGATCAG
GTCCGCCCCCTGCTGCAGGACGTCGCCACATCCATGGCCAGGCTCGGTTCCTTGCTGCCG
CCCGACTTTGAGGGGAAGGTCAAGGTTAACGAGTGGCTTGCCAAGCTGCATAAAATGGGC
GCCGCGGATGAACTCACCGAGCAGCAGGCCAGGCAGCTCAACTTCGACCTCGACTCGGCC
TACAGTGCCTTTTTGGCTGCGCTGCCCGCCGCTGGTCTGTAA

Peptide Sequence

PEP ID

Zm00001d043269_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:193860001:193860642:-1 gene:Zm00001d043269 transcript:Zm00001d043269_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 28 homolog 2
Sequence

MEVKLWNDKRERELLESYADLYAIIKAVEKLERAYVRDLVSAADYEAECLKLISQFNSLS
SSLAGAVTVPRFVQAYRLDCPAALNRLLQSGVPATVELRAASASSAPAATAASASAIAHC
VQTFITAMDAVKLNMLANDQVRPLLQDVATSMARLGSLLPPDFEGKVKVNEWLAKLHKMG
AADELTEQQARQLNFDLDSAYSAFLAALPAAGL

Transcript Sequence

Transcript ID

Zm00001d043269_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:193860001:193860642:-1 gene:Zm00001d043269 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 28 homolog 2
Sequence

ATGGAGGTGAAGTTGTGGAACGACAAGCGCGAGCGGGAGCTCCTGGAGAGCTACGCGGAC
CTGTACGCGATCATCAAGGCCGTGGAGAAGCTGGAACGGGCCTACGTCCGGGACCTCGTC
TCAGCCGCCGACTACGAGGCGGAGTGCCTCAAGCTTATCTCCCAGTTCAACTCCCTCTCC
TCCTCGCTCGCCGGCGCCGTCACCGTCCCTCGCTTCGTCCAGGCGTACCGCCTCGATTGC
CCCGCCGCGCTCAACCGCCTCCTCCAGTCGGGCGTCCCGGCCACCGTCGAGCTCCGCGCC
GCGTCCGCCTCATCCGCGCCGGCCGCCACCGCCGCCTCCGCGTCAGCCATCGCGCACTGC
GTGCAGACCTTCATCACCGCCATGGACGCCGTCAAGCTCAACATGCTTGCCAACGATCAG
GTCCGCCCCCTGCTGCAGGACGTCGCCACATCCATGGCCAGGCTCGGTTCCTTGCTGCCG
CCCGACTTTGAGGGGAAGGTCAAGGTTAACGAGTGGCTTGCCAAGCTGCATAAAATGGGC
GCCGCGGATGAACTCACCGAGCAGCAGGCCAGGCAGCTCAACTTCGACCTCGACTCGGCC
TACAGTGCCTTTTTGGCTGCGCTGCCCGCCGCTGGTCTGTAA