Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043244_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:193000729:193003186:-1 gene:Zm00001d043244 gene_biotype:protein_coding transcript_biotype:protein_coding description:Indole-3-acetic acid-amido synthetase GH3.6
Sequence	ATGCCGGAAGCACCGACTACCAAGATAAACCCGCCAGCCGGCGGCTTCGCCCCCGGGGCG CACCGCGAGGCACTCGAGTTCATCGAGCATGTCACGGCGAACGCCGGGAAGGTGCAGCGG CGCGTCCTCGCGGAGATACTGTCGCAGAACGCGCCAGCCGAGTATCTGCGCCGCTACGGC GTCCCGGGAGGATCCGCCGATGCCGTCGAAGCCTTCCGCCGTGTGGTCCCGCTCGTCACC TACGAGGGCCTCCAGCCGGACATACTCCGCATTGCCAACGGCGATGCCTCGCCGATCCTC TCAGGCAAACCCATCTCCGAGTTCCTCACGAGCTCTGGAACATCCGGAGGGGAGAGGAAG CTGATGCCGACCATCGCCGACGAGCTGGACAGGAGGTCGTTGCTGTATAGCCTGCAGATG CCGGTGATGAGCCAGTCGGTGCCGGGGCTGGACAAGGGCAAGGCGATGTACCTGCTATTC GTGAAGGCGGAGTCGCGCACACCAGGCGGACTGGTGGCGCGGCCGGTGCTGACGAGCTAC TACCGGAGCCGGCAGTTCCTGGAGCGGCCGCACGACCCCTACACCGAGTACACGAGCCCC AACGAGGCCATCCTGTGCGTGGACTCGTACCAGAGCATGTACGCGCAGCTGCTCTGCGGC CTCGTCCACCGCGCCGACGTGCTGCGCGTCGGCGCCGTGTTCGCCTCGGGCTTCCTCCGC GCCATCCGCTTCCTCGAGAAGCACTGGCCGCGTCTGTGCCGCGACATCCGCACGGGCACC CTCGACCCGGAGATCACGGACCGCGCCGTGCGCGACGCCGTCGCCAGGGTGCTCCGCGGC GCCGACCCGGCGCTTGCCGACGAGATCGAGGCCGTGTGCGGGGGGTCGTCATGGGAGAGC ATCATCCGGCGCCTGTGGCCCCGCACCAGGTACGTCGACGTGATTGTGACCGGGGCCATG TCGCAGTACATCCCGACGCTGGAGTTCTACGGCGGTGGCCTGCCCCTAGCCTGCACCATG TACGCCTCCTCCGAGTGCTACTTCGGCCTCAACCTGAACCCCATGTGCAAGCCAGGCGAC GTGGCATACACGCTCATCCCCACCATGTGCTACTTCGAGTTCCTTCCTCTCCAGTGCAGC AACGGCAAGGCAGAGCCGAGCCACCGCGACCTGGTTGGCCTCGTGGATGTGAAGCTGGGT CACGAGTATGAGCTCGTCGTCACCACCTACTCCGGGTTGTATCGGTACCGCGTGGGCGAC GTGCTGAGGGTTGCCGGCTTCAAGAACGAGGCGCCGATGTTCAAGTTCGTCAGGCGGCAG AACGTGGCGCTGAGCGTCGACTCCGACAAGACGGACGAGACGGAGCTGCACGCAGCCGTG AGCGGCGCGGTGCAGCACCTGGCGCCGTTCGGCGCGTCGCTGGTGGAGTACACCAGCTAC GCCGACGCGGCTACCATCCCGGGCCACTACGTGCTGTTCTGGGAGCTGCGCGCGGGCAGC ACGGCCGTGCCGGCGTCCGTGTTCGAGGACTGCTGCCTGTCGGTGGAGGAGGAGCTCAAC AGCGTGTACCGGCAGTGCCGGGCCTGCGACAAGTCCATCGGGCCCCTCGAGATACGCGTC GTGTCCGAGGGCACGTTCGACAAGCTCATGGACTACGCCATCAGCCGCGGCGCGTCCATC AACCAGTACAAGGCGCCGCGCTGCGTGCGCCCCGGCCCCGTCGTGGAGCTGCTCGACGCG AGGGTGCAGGCCAAGTACTTCAGCCCCAAGTGCCCCAAGTGGAGTCCGGGGAACAAGCAA TGGAACGCCAGCAACGGGGACGCCTGA

Peptide Sequence

PEP ID	Zm00001d043244_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:193000729:193003186:-1 gene:Zm00001d043244 transcript:Zm00001d043244_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Indole-3-acetic acid-amido synthetase GH3.6
Sequence	MPEAPTTKINPPAGGFAPGAHREALEFIEHVTANAGKVQRRVLAEILSQNAPAEYLRRYG VPGGSADAVEAFRRVVPLVTYEGLQPDILRIANGDASPILSGKPISEFLTSSGTSGGERK LMPTIADELDRRSLLYSLQMPVMSQSVPGLDKGKAMYLLFVKAESRTPGGLVARPVLTSY YRSRQFLERPHDPYTEYTSPNEAILCVDSYQSMYAQLLCGLVHRADVLRVGAVFASGFLR AIRFLEKHWPRLCRDIRTGTLDPEITDRAVRDAVARVLRGADPALADEIEAVCGGSSWES IIRRLWPRTRYVDVIVTGAMSQYIPTLEFYGGGLPLACTMYASSECYFGLNLNPMCKPGD VAYTLIPTMCYFEFLPLQCSNGKAEPSHRDLVGLVDVKLGHEYELVVTTYSGLYRYRVGD VLRVAGFKNEAPMFKFVRRQNVALSVDSDKTDETELHAAVSGAVQHLAPFGASLVEYTSY ADAATIPGHYVLFWELRAGSTAVPASVFEDCCLSVEEELNSVYRQCRACDKSIGPLEIRV VSEGTFDKLMDYAISRGASINQYKAPRCVRPGPVVELLDARVQAKYFSPKCPKWSPGNKQ WNASNGDA

Transcript Sequence

Transcript ID	Zm00001d043244_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:193000729:193003186:-1 gene:Zm00001d043244 gene_biotype:protein_coding transcript_biotype:protein_coding description:Indole-3-acetic acid-amido synthetase GH3.6
Sequence	GCACACAGCAAACACACGCCCACTGGCCAAGCACCAAATAACACGCCTCGTGTCGACCAG CGAGGGCCAAAGGCACGAGCAGCGGCACTAGCAATACGCACTGCAGTGCCATGCCGGAAG CACCGACTACCAAGATAAACCCGCCAGCCGGCGGCTTCGCCCCCGGGGCGCACCGCGAGG CACTCGAGTTCATCGAGCATGTCACGGCGAACGCCGGGAAGGTGCAGCGGCGCGTCCTCG CGGAGATACTGTCGCAGAACGCGCCAGCCGAGTATCTGCGCCGCTACGGCGTCCCGGGAG GATCCGCCGATGCCGTCGAAGCCTTCCGCCGTGTGGTCCCGCTCGTCACCTACGAGGGCC TCCAGCCGGACATACTCCGCATTGCCAACGGCGATGCCTCGCCGATCCTCTCAGGCAAAC CCATCTCCGAGTTCCTCACGAGCTCTGGAACATCCGGAGGGGAGAGGAAGCTGATGCCGA CCATCGCCGACGAGCTGGACAGGAGGTCGTTGCTGTATAGCCTGCAGATGCCGGTGATGA GCCAGTCGGTGCCGGGGCTGGACAAGGGCAAGGCGATGTACCTGCTATTCGTGAAGGCGG AGTCGCGCACACCAGGCGGACTGGTGGCGCGGCCGGTGCTGACGAGCTACTACCGGAGCC GGCAGTTCCTGGAGCGGCCGCACGACCCCTACACCGAGTACACGAGCCCCAACGAGGCCA TCCTGTGCGTGGACTCGTACCAGAGCATGTACGCGCAGCTGCTCTGCGGCCTCGTCCACC GCGCCGACGTGCTGCGCGTCGGCGCCGTGTTCGCCTCGGGCTTCCTCCGCGCCATCCGCT TCCTCGAGAAGCACTGGCCGCGTCTGTGCCGCGACATCCGCACGGGCACCCTCGACCCGG AGATCACGGACCGCGCCGTGCGCGACGCCGTCGCCAGGGTGCTCCGCGGCGCCGACCCGG CGCTTGCCGACGAGATCGAGGCCGTGTGCGGGGGGTCGTCATGGGAGAGCATCATCCGGC GCCTGTGGCCCCGCACCAGGTACGTCGACGTGATTGTGACCGGGGCCATGTCGCAGTACA TCCCGACGCTGGAGTTCTACGGCGGTGGCCTGCCCCTAGCCTGCACCATGTACGCCTCCT CCGAGTGCTACTTCGGCCTCAACCTGAACCCCATGTGCAAGCCAGGCGACGTGGCATACA CGCTCATCCCCACCATGTGCTACTTCGAGTTCCTTCCTCTCCAGTGCAGCAACGGCAAGG CAGAGCCGAGCCACCGCGACCTGGTTGGCCTCGTGGATGTGAAGCTGGGTCACGAGTATG AGCTCGTCGTCACCACCTACTCCGGGTTGTATCGGTACCGCGTGGGCGACGTGCTGAGGG TTGCCGGCTTCAAGAACGAGGCGCCGATGTTCAAGTTCGTCAGGCGGCAGAACGTGGCGC TGAGCGTCGACTCCGACAAGACGGACGAGACGGAGCTGCACGCAGCCGTGAGCGGCGCGG TGCAGCACCTGGCGCCGTTCGGCGCGTCGCTGGTGGAGTACACCAGCTACGCCGACGCGG CTACCATCCCGGGCCACTACGTGCTGTTCTGGGAGCTGCGCGCGGGCAGCACGGCCGTGC CGGCGTCCGTGTTCGAGGACTGCTGCCTGTCGGTGGAGGAGGAGCTCAACAGCGTGTACC GGCAGTGCCGGGCCTGCGACAAGTCCATCGGGCCCCTCGAGATACGCGTCGTGTCCGAGG GCACGTTCGACAAGCTCATGGACTACGCCATCAGCCGCGGCGCGTCCATCAACCAGTACA AGGCGCCGCGCTGCGTGCGCCCCGGCCCCGTCGTGGAGCTGCTCGACGCGAGGGTGCAGG CCAAGTACTTCAGCCCCAAGTGCCCCAAGTGGAGTCCGGGGAACAAGCAATGGAACGCCA GCAACGGGGACGCCTGATCACCTTTAATTTCTCAGCCGGCCGGAGTGACGATGGATGCTT TGGTTGGTATATACAATATGAATTTTCAGAGGCAGCAGCGAGGAATTAATAGTTATGGAA TGATGACCTAGGGGTATCCACATCTTTTGATCTTATTTGAATCCTTTTTTTTCTTCATCT CTTGTAATATGTCCCGTGTTTCTTTGTGGTCGTGTATTTTGCAACGCACTTAGCTTAATT GGTGCTTGTCAGTTACATATACTAAGTTACTACTTTCATATATTAGCCATATATACGGAA TGGATTTTCCAGCGTCAAACTAAAACAGTTTACATATT