Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043240_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:3:192834688:192837465:1 gene:Zm00001d043240 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sulfite exporter TauE/SafE family protein
Sequence

ATGACGAGGACTACGCAGCTCGTCGCCGCCATCGCGGTTTCCTTCCTGTCAGCGGCGGCC
GCGTCCAACACCACCACGTCACTCCAAAGCCTCGTCGCCGAAGTGTCGCAGTGGCGGGAA
ATCCACCTGGGCGGCGGCGCGGCGGCGGCGCATGGCGTCCGGCCGAGCACCGTCGTGGCG
TGGGCGCTCTCCTTCCTGGCCGCGTCCGTGTCGAGCGCCGGCGGCGTGGGCGGCGGGTCG
CTGTTCCTGCCCATCCTGAACCTGGTGGCGGGGCTGAGCCTGAAGCGCGCCACTGCCTAC
TCGTCCTTCATGGTCACCGGCGGCGCGGCCTCGAACGTGCTCTACAACCTCGCCTGCACG
GGCGGCGGCGGGAGAGGGAGGCTGATCGACTACGACATCGCGCTACTGTTCCAGCCGTGC
CTGCTCCTGGGCGTGAGCATCGGGGTGGTGTGCAACGTCATGTTCCCGGAGTGGCTCATC
ACCCTGCTCTTCTCCCTGTTCCTCGCCTTCTGCACAGCCAAGACGTGCCGCGCGGGGGTC
AAGATCTGGCGGTCCGAGAGCAGCGGGTGCGGGTCCGGGGCTAGGTCCTCGCGCGGTGGA
CACAGCCACAGCAAGGAGCCCCTGCTGCCCCGCGGCACCAGCGACGGCGACGCCGAGGGC
GGCGGCGGAAATGGCGCGGGGTTCCCGTGGGGAGACGTGGCTCTGCTTGTCATCATCTGG
CTCTGCTTCTTCGCCCTCCATGTCCTCATTGGCGATAAGCACGGGAAGGGCGTGATCAGG
ATTAGGCCCTGCGGCGTCGCGTACTGGCTGATCACCTTCTTCCAGCTACCTGCCGCTGTG
GCTTTCACAGGGTATATTGTATACGCCAAGAGGAAGAAACGCGCTGTTCATAGCGAAAGC
CAAGAGGACGGCAGCAAGGCAGACCTTGCGGACGCAGGAGTGGAAGCCTTGCCACTACCT
ACACTACCTCTCGCCGCTTTCGTCACCGGGGCTCTGAGCGGCCTCTTCGGCATCGGAGGA
GGGCTGCTTCTGAACCCTGTCCTTCTTCAGATCGGAATTCCCCCGCAGGTCGTACGGTAC
ACAACAACGACGCCCCGGGCATTCGCGTTCCTCCCTAATGTTGCTGCAAAGTCCATATAT
ATAGGTACCGTACCAGTGAATCATTCAATTCTATGTATCTGCAGACCGCGGCAGCGACGT
CTTCGTTCATGGTCCTGTTCTGTGCGTCCATGTCCATGGTCCAGTTCATCCTGCTGGGCG
TGGAAGGCGTCGGGCAGGCCTGCGTTTACGCCGGGGTATGCTTCGCCGGCTCGGTCGCGG
GGGTCGTCGTGA

Peptide Sequence

PEP ID

Zm00001d043240_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:3:192834688:192837465:1 gene:Zm00001d043240 transcript:Zm00001d043240_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sulfite exporter TauE/SafE family protein
Sequence

MTRTTQLVAAIAVSFLSAAAASNTTTSLQSLVAEVSQWREIHLGGGAAAAHGVRPSTVVA
WALSFLAASVSSAGGVGGGSLFLPILNLVAGLSLKRATAYSSFMVTGGAASNVLYNLACT
GGGGRGRLIDYDIALLFQPCLLLGVSIGVVCNVMFPEWLITLLFSLFLAFCTAKTCRAGV
KIWRSESSGCGSGARSSRGGHSHSKEPLLPRGTSDGDAEGGGGNGAGFPWGDVALLVIIW
LCFFALHVLIGDKHGKGVIRIRPCGVAYWLITFFQLPAAVAFTGYIVYAKRKKRAVHSES
QEDGSKADLADAGVEALPLPTLPLAAFVTGALSGLFGIGGGLLLNPVLLQIGIPPQVVRY
TTTTPRAFAFLPNVAAKSIYIGTVPVNHSILCICRPRQRRLRSWSCSVRPCPWSSSSCWA
WKASGRPAFTPGYASPARSRGSS

Transcript Sequence

Transcript ID

Zm00001d043240_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:192834688:192837465:1 gene:Zm00001d043240 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sulfite exporter TauE/SafE family protein
Sequence

ATCGCGTACAAAAGTAGTCACAGACATATCTCCCCTCTGTTCCGAGAAGCAAACAGAGGC
CGAAGCCAAAGATGACGAGGACTACGCAGCTCGTCGCCGCCATCGCGGTTTCCTTCCTGT
CAGCGGCGGCCGCGTCCAACACCACCACGTCACTCCAAAGCCTCGTCGCCGAAGTGTCGC
AGTGGCGGGAAATCCACCTGGGCGGCGGCGCGGCGGCGGCGCATGGCGTCCGGCCGAGCA
CCGTCGTGGCGTGGGCGCTCTCCTTCCTGGCCGCGTCCGTGTCGAGCGCCGGCGGCGTGG
GCGGCGGGTCGCTGTTCCTGCCCATCCTGAACCTGGTGGCGGGGCTGAGCCTGAAGCGCG
CCACTGCCTACTCGTCCTTCATGGTCACCGGCGGCGCGGCCTCGAACGTGCTCTACAACC
TCGCCTGCACGGGCGGCGGCGGGAGAGGGAGGCTGATCGACTACGACATCGCGCTACTGT
TCCAGCCGTGCCTGCTCCTGGGCGTGAGCATCGGGGTGGTGTGCAACGTCATGTTCCCGG
AGTGGCTCATCACCCTGCTCTTCTCCCTGTTCCTCGCCTTCTGCACAGCCAAGACGTGCC
GCGCGGGGGTCAAGATCTGGCGGTCCGAGAGCAGCGGGTGCGGGTCCGGGGCTAGGTCCT
CGCGCGGTGGACACAGCCACAGCAAGGAGCCCCTGCTGCCCCGCGGCACCAGCGACGGCG
ACGCCGAGGGCGGCGGCGGAAATGGCGCGGGGTTCCCGTGGGGAGACGTGGCTCTGCTTG
TCATCATCTGGCTCTGCTTCTTCGCCCTCCATGTCCTCATTGGCGATAAGCACGGGAAGG
GCGTGATCAGGATTAGGCCCTGCGGCGTCGCGTACTGGCTGATCACCTTCTTCCAGCTAC
CTGCCGCTGTGGCTTTCACAGGGTATATTGTATACGCCAAGAGGAAGAAACGCGCTGTTC
ATAGCGAAAGCCAAGAGGACGGCAGCAAGGCAGACCTTGCGGACGCAGGAGTGGAAGCCT
TGCCACTACCTACACTACCTCTCGCCGCTTTCGTCACCGGGGCTCTGAGCGGCCTCTTCG
GCATCGGAGGAGGGCTGCTTCTGAACCCTGTCCTTCTTCAGATCGGAATTCCCCCGCAGG
TCGTACGGTACACAACAACGACGCCCCGGGCATTCGCGTTCCTCCCTAATGTTGCTGCAA
AGTCCATATATATAGGTACCGTACCAGTGAATCATTCAATTCTATGTATCTGCAGACCGC
GGCAGCGACGTCTTCGTTCATGGTCCTGTTCTGTGCGTCCATGTCCATGGTCCAGTTCAT
CCTGCTGGGCGTGGAAGGCGTCGGGCAGGCCTGCGTTTACGCCGGGGTATGCTTCGCCGG
CTCGGTCGCGGGGGTCGTCGTGATCGAGCGAGCCGTCAGCAAGTCTGGCCGGGTCTCGCT
CATCGTGTTCCTCGTCACCGCCATCATGGCGCTCAGCGCTGTCATCGTCACCTGCTTCGG
AGCGTTAGACGTCTGGATGCAGTACACCACCGGGGAATACATGGGCTTCAAGCTACCTTG
CTGACATCTTGCTCGGTGTTATGGGCTTCGTTTTGGTTTTGCGTTTGTGCTCTTCACCTT
GTAATGTCTGGAAAGAGAGGCCGGAGTAGGACTGGTTGTGCATGGGCACTCATTGTAATT
TCCAATTTTCAGGTTTTATATAGTGTGAATTGTCATCTTCACTTGTTTATTTACTCCCAC
GGGGAAAAATATATATGTTCATGAGTGCAT