Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043206_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:3:191700141:191718032:1 gene:Zm00001d043206 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative E3 ubiquitin-protein ligase RING1a
Sequence	ATGCCTGCGCAAAAGCGCCGGCTCCCATCGCCGTCTTCGAAACCCCGCGACGACGTCGCG GCTACAGCCTCTGATGCCGCCGCCGGCGGAGGCGTAGGAGAAGGAAGAGGAGGACGCCCG CCGCTGCCGAGCAGGGACGCCGCCAAACGGTGGTTGACTGACCCGGAGCCACAGCAAGGA TTCGAAGACGATTCGGACGCGGAGGATGATGGCGGCGCGGACGGCGACAGCGAGTTCTCC CAGAGCGACGGCGGCGGCAACGACGGGTTTATGCTAGTGAAATTAGCAGAGATAAGGAAG GAGGTTCAGTGCCCTATCTGTTTAGGCATTATTCGGAAGACAAGGACAGTTATGGAATGT CTGCACCGCTTCTGTAGAGACTGCATTGACAAATCTATGCGGCTAGGAAATAATGAATGC CCATCGTGTCGCACTCATTGTGCAAGTCGACGTTCTTTGAGGGACGATCCTAACTATGAT GCACTGATTGCAGCCTTATATCCAGATATTGATAAGTACGAGGAAGAGGAACTTGCTTTT AATGAGCAGGAGATGACTCGGAATCAAAAGTTCCAGTTGTATCTGGTTCTGCTTCCTGTC GATGGACAAACCATACCTCACTTGGAAAAGCCTTATCTAAGTTGTCAACCAACCTTGTCC ATTCAACATCTTGTAGAGTTAATTGCTCTTCAGTTGTCTCGGAAAGTCGAAGAACTTGAG ATGTACATAAGGATGGACGGCGACCATGGAAGTGTTGGCTCGATGGCTTGCAGTATAGGT GAATTTGATGGCTTGGAAAGGCTGAGGGAAGATAAACTTCTTTCGGAACTTCATCCTTCG TTTGCCTCTAGCAACGGTGATCTGGAGTTGCGATATGCTTTGAAAACTCGAGACTAG

Peptide Sequence

PEP ID	Zm00001d043206_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:3:191700141:191718032:1 gene:Zm00001d043206 transcript:Zm00001d043206_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative E3 ubiquitin-protein ligase RING1a
Sequence	MPAQKRRLPSPSSKPRDDVAATASDAAAGGGVGEGRGGRPPLPSRDAAKRWLTDPEPQQG FEDDSDAEDDGGADGDSEFSQSDGGGNDGFMLVKLAEIRKEVQCPICLGIIRKTRTVMEC LHRFCRDCIDKSMRLGNNECPSCRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAF NEQEMTRNQKFQLYLVLLPVDGQTIPHLEKPYLSCQPTLSIQHLVELIALQLSRKVEELE MYIRMDGDHGSVGSMACSIGEFDGLERLREDKLLSELHPSFASSNGDLELRYALKTRD

Transcript Sequence

Transcript ID	Zm00001d043206_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:191700141:191718032:1 gene:Zm00001d043206 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative E3 ubiquitin-protein ligase RING1a
Sequence	CACCTCTCTCCATATACTACCCCTCCCCCTCCTCCGCATCCTCCCCGTCGAGCCACACCA CCTCCCCTCCCTCCCAAACCCCAGCGCCTCGGCAGGGTGGTGAACCACCGCCCCCGCGCC CTTGCTGCAATCCGAGAACCAAGATCCCAGGGGCAGAAAGCCAGAATGCCTGCGCAAAAG CGCCGGCTCCCATCGCCGTCTTCGAAACCCCGCGACGACGTCGCGGCTACAGCCTCTGAT GCCGCCGCCGGCGGAGGCGTAGGAGAAGGAAGAGGAGGACGCCCGCCGCTGCCGAGCAGG GACGCCGCCAAACGGTGGTTGACTGACCCGGAGCCACAGCAAGGATTCGAAGACGATTCG GACGCGGAGGATGATGGCGGCGCGGACGGCGACAGCGAGTTCTCCCAGAGCGACGGCGGC GGCAACGACGGGTTTATGCTAGTGAAATTAGCAGAGATAAGGAAGGAGGTTCAGTGCCCT ATCTGTTTAGGCATTATTCGGAAGACAAGGACAGTTATGGAATGTCTGCACCGCTTCTGT AGAGACTGCATTGACAAATCTATGCGGCTAGGAAATAATGAATGCCCATCGTGTCGCACT CATTGTGCAAGTCGACGTTCTTTGAGGGACGATCCTAACTATGATGCACTGATTGCAGCC TTATATCCAGATATTGATAAGTACGAGGAAGAGGAACTTGCTTTTAATGAGCAGGAGATG ACTCGGAATCAAAAGTTCCAGTTGTATCTGGTTCTGCTTCCTGTCGATGGACAAACCATA CCTCACTTGGAAAAGCCTTATCTAAGTTGTCAACCAACCTTGTCCATTCAACATCTTGTA GAGTTAATTGCTCTTCAGTTGTCTCGGAAAGTCGAAGAACTTGAGATGTACATAAGGATG GACGGCGACCATGGAAGTGTTGGCTCGATGGCTTGCAGTATAGGTGAATTTGATGGCTTG GAAAGGCTGAGGGAAGATAAACTTCTTTCGGAACTTCATCCTTCGTTTGCCTCTAGCAAC GGTGATCTGGAGTTGCGATATGCTTTGAAAACTCGAGACTAGATCAGTTTTAATCTTCAG CTACTAATTTATGAAGTCACTGTCCATACGGTGGTGATGCAAATGAGATCTGCATCTGGT GAACGGATTTATGTAAAAAGAATATTCAATGTGAAAAAATGGTGAACCTGTTTTTCTGAT GAGTCTTGCTAGGTTAATTTACCAACTTTGTAAATATATAATGAACTGAATTGTGAATGT TTGCAGTAGGTGAACATGCTGTCTAATATTTAT