Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043191_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:3:191133558:191139963:1 gene:Zm00001d043191 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MICRORCHIDIA 6
Sequence

ATGGACGCGGAGAGAGACATCAAGCCCTTCGTCTCCCCTATCATGGCCACCACCATCCAG
CATAGGCGGAGCCTCCATGGCCCCAACGCTTCTCAGCCAACTGCATTGGCATCGGAGCAC
GATGGCACTCCAGTGTTACCGCAAACTCAGCCTCAAGCAGCATGCGTCTTGAACAAGGCC
GCTTCAGAGGTGTCAGGTGACGTCAGCGACCAGTCCATTAGTGCCTACGAGACACTCGAG
GGTACCTCGACTCGTCGGCCTTGCTCTGCACCACGATTGAGCAGGAAATTCTGGGGCGCC
GGCGATTATGACGCGGCGGCGGGGAGGTCCACGCCACAACCTCTAAGTCTACAGAATCGC
ATGTGCGTCCACCCCGAATTTCTCCACTCTAATGCGACTTCACATAAGTGGCCGTTTGGA
GCCTTGGCAGAGTTGTTGGACAATGCAGTCGATGAGATAGAAACTGGTGGTGCTACAACA
ATATTGTTGGACAAAGTCACCGACAAACGGAATGGATCACCAGCTATACTAATTCAAGAT
GATGGTGGAGGCATGGATCCTGATTCTTTGAGGCGGTGTATGAGCTTTGGATTTTCAGAG
AAACAATCAGGATCTTCGATTGGACAATATGGAAATGGTTTTAAGACTAGCACAATGCGG
CTTGGGGCAGATGTTATTGTTTTCAGTCGCTGCACTAAGAGCAGTGGGCCTACACAATCC
ATTGGTCTCCTCTCTTACACTTTCTTGGTGGAAACTGGACATACAGATGTTGTAGTTCCT
GTGGTGGATTATAAATGCAATCTAATGAAAGGACAAACTCAACGACTGGAGCGTCATGGT
TCGGAACAATTCTTCTCAAATTTGTCAGCATTGTTGAAATGGTCCCCTTTTGCAACAGAA
GAAGAGCTGATGCAGAATTTCTGTGACATTGGTCCACATGGCACCAAGATTATAGTGTTC
AATCTGTGGTCCAACGACGATGGTAATTTGGAGCTCGACTTTGACACAGATCCGGAGGAT
ATTATGATTAGTGGAGCGCCAAATCCAGAAGAAATTAGAAATTCTGTAAAAAGGGCTAAT
GAGAACCATTTGGCAAATCGACTACGCTATTCTCTTAGGGTCTATGCTTCTGTGTTGTAT
CTGCAGCTACCAGATTACTTTAGGATCATACTTCGAGGGCAAGAAGTTAAGCGTCATCGC
ATTGCCGCTGACCTAATATATCCTGAATGCATCAGTTATAAACCACATAGTTGTGGAATA
AAAGAGGCTACGGTTCTTACAACCATTGGATTCTTAAAGGGTGCCCCAACTATTAGCGTG
CACGGATTTAATATCTATCATAAAAATCGCCTTATTTTGCCATTTCATAGAGTTCTGAAT
ACTTCAAGCAGCAAAGGTAGAAGCGTCTCTGGGGTGTTGGAGGTAGACTTCATCAAGCCC
ACTCATGACAAACAGGACTTTGAGAAGTCACAGCTGTTCCAGAAGCTGATCAACCGCCTG
AAGGAGATGACTAACGAGTACTGGGAACTTTACAGTGACAAGATTGGATACATGAAAAAG
CCACGCGTGAGTGCAGCTCCTCTTCCTCCTCCAGTAATGCTGCCGATAGCAAATGGCACT
GCTGAACCATCAGATAGGAGCGCACCTGCTCCGACGCAACCCTTGAGGTCGCACAGCAAC
TACTTGAATGCAGTTCCAATCGCCTCAGCGCCCCCTGGTTTTCACTCAGCACCTGTCAAA
GCAGAGAGCGTTGCACCAGGAGCGCATATGGGCTACTCCCCGTCCTCGCTAAACGCGCAG
ACCATGCAAGTCAACGGGATAAAATCGCCTTCCATGGTGCCTGCCACCGATTCGGTAGAC
ACAAGAAAAAGGAGGAACGACGACACTACTACTATGACGGTCGCGTTTAAAAGGAAGGCT
ACGCAGGATTTGGCTGGCAGCAGCTGTGCTACTGATGAGACAAAACAGGTATCCGGGTAT
ATGGGGATGGGAGAGCGAGAGACGAAGGAATTTTGCTTCCTGAAGATGGAAAACCGGATG
CTCCGTGAAGAGTGCTCGGATTTTGTTATGGCAGAGAAGGCACTACGACTCAAGGAACAG
AATTTACGGCTCGAGATTGAGAAGGCGCGGGAGCAATTCAAGAGCCTACTGAACGAATAC
GTTTCGTTGTCAGCTACGCCGACACAGAAACGGTAG

Peptide Sequence

PEP ID

Zm00001d043191_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:3:191133558:191139963:1 gene:Zm00001d043191 transcript:Zm00001d043191_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MICRORCHIDIA 6
Sequence

MDAERDIKPFVSPIMATTIQHRRSLHGPNASQPTALASEHDGTPVLPQTQPQAACVLNKA
ASEVSGDVSDQSISAYETLEGTSTRRPCSAPRLSRKFWGAGDYDAAAGRSTPQPLSLQNR
MCVHPEFLHSNATSHKWPFGALAELLDNAVDEIETGGATTILLDKVTDKRNGSPAILIQD
DGGGMDPDSLRRCMSFGFSEKQSGSSIGQYGNGFKTSTMRLGADVIVFSRCTKSSGPTQS
IGLLSYTFLVETGHTDVVVPVVDYKCNLMKGQTQRLERHGSEQFFSNLSALLKWSPFATE
EELMQNFCDIGPHGTKIIVFNLWSNDDGNLELDFDTDPEDIMISGAPNPEEIRNSVKRAN
ENHLANRLRYSLRVYASVLYLQLPDYFRIILRGQEVKRHRIAADLIYPECISYKPHSCGI
KEATVLTTIGFLKGAPTISVHGFNIYHKNRLILPFHRVLNTSSSKGRSVSGVLEVDFIKP
THDKQDFEKSQLFQKLINRLKEMTNEYWELYSDKIGYMKKPRVSAAPLPPPVMLPIANGT
AEPSDRSAPAPTQPLRSHSNYLNAVPIASAPPGFHSAPVKAESVAPGAHMGYSPSSLNAQ
TMQVNGIKSPSMVPATDSVDTRKRRNDDTTTMTVAFKRKATQDLAGSSCATDETKQVSGY
MGMGERETKEFCFLKMENRMLREECSDFVMAEKALRLKEQNLRLEIEKAREQFKSLLNEY
VSLSATPTQKR

Transcript Sequence

Transcript ID

Zm00001d043191_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:191133558:191139963:1 gene:Zm00001d043191 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MICRORCHIDIA 6
Sequence

GGCGGCAGGGACGCAAGGGGATGGGAGAGGAGGTTGTTGCGGTGGGGTCGCGAGGGCGGG
GAGGGATGAGGAATGATCCAAATAATATTGTCCATTGGATTTGGGTAAGGGAGATGGGGT
TATCCAGCGATCTGAACTGTTGGTTTTGATTGTGTGTTAAGTCTGAGTGTAATTTGTTTG
GTGGATTTAGTGGAGGTTATGGATGTGTGGGTGATTTGGTTGTGTGAGTTTTGCAAAGTT
TAAACTGGTGGGTTATATAGTGGTATAGATGGAACACTTGACCTAGTTTCCTTAATGAGG
TTGTACGCTCTATAGAAATTTTATTAAAAGGAAGAGCACAAAGAACTTTTTTAAATTTTC
TATGATTATTAAAAAAATTAGAATATGTTGTTTTTTCTAAGCTAGCATATAGCACATGCT
AACATTACGATCTTGGAGAGGGAAGAGGCAGGGTTGACTGTGATGGCCACGACACGAGGG
AAGGGGTTGGCGACGACGGCATGAGTGAGGGAGAGGCTGGAGGCGGCAGGGAGAGAGATA
ATGGATGGTCTAAATAATATTGTCCATTGGATTTGAGTAAGGGAGAGAGGATTATCCAGC
GATCTGAACTATTGATTTTGATGATGTGTTAAGTCTGGGTGCAATTTGTTTGGTGGATTC
AATGGAGGTTATGAGCATGGGGGTAATTTGGTTGGATGAGTTTTGTAAAGTTTAAACTGG
TGGATTATATAGTGGTATAGATATAAATATATATTTCGTAGTTCTCTCGGTATTCTTGAT
TTAATTTACCGTACCTAGAGGTGGTAATAGACTCTAAATTTTACACTGTAAAATTTAAAG
ATCAGATCAGATTAGATTCGGTTTTTCCATTCATTTTTGAACTCAAATTATTTGAAGTCC
TAAACAAATTGTGAAAGAACATTTAGATCAGTGTTTTTAAAACTAGTTTAAATGTCAAAA
CGGTAATTAGAGGTTGAAACCACGTTTTGGCGTTCTAAACTGTAAAACACAGTGTTTCAT
GGGTTTTAGACCATTAGCTACTTTTGGACCCGGTCTGTTAGTTACTTTTGGGTCCAATCC
GACTCATGAGTGAAGTTTTGGTAAGCCACTAACATCTCTATTTTGGTATTTAACTTCATG
TTATTGTTTGAAATTATGATATATTGGTATTTTTCCTATGTTGTTTAAAACTACGTTTAA
AAGTCAAAACTTCACCCATGAGTGTTTCAACGTTTTATCGTTTTAATAACCTTGATTTAG
ATCATAATCCATTATCACCCCTAACCGTACCTGATGTTGCAGGTTTGCAAAATTGCAACC
GCCCCCACCACATGTGCACGTCCTCACTAATCGTTCCCACCGCTTGTCACTTAACATCAA
CCGCCTCGAGGAACTGTCGACGGACTACATGGACGCGGAGAGAGACATCAAGCCCTTCGT
CTCCCCTATCATGGCCACCACCATCCAGCATAGGCGGAGCCTCCATGGCCCCAACGCTTC
TCAGCCAACTGCATTGGCATCGGAGCACGATGGCACTCCAGTGTTACCGCAAACTCAGCC
TCAAGCAGCATGCGTCTTGAACAAGGCCGCTTCAGAGGTGTCAGGTGACGTCAGCGACCA
GTCCATTAGTGCCTACGAGACACTCGAGGGTACCTCGACTCGTCGGCCTTGCTCTGCACC
ACGATTGAGCAGGAAATTCTGGGGCGCCGGCGATTATGACGCGGCGGCGGGGAGGTCCAC
GCCACAACCTCTAAGTCTACAGAATCGCATGTGCGTCCACCCCGAATTTCTCCACTCTAA
TGCGACTTCACATAAGTGGCCGTTTGGAGCCTTGGCAGAGTTGTTGGACAATGCAGTCGA
TGAGATAGAAACTGGTGGTGCTACAACAATATTGTTGGACAAAGTCACCGACAAACGGAA
TGGATCACCAGCTATACTAATTCAAGATGATGGTGGAGGCATGGATCCTGATTCTTTGAG
GCGGTGTATGAGCTTTGGATTTTCAGAGAAACAATCAGGATCTTCGATTGGACAATATGG
AAATGGTTTTAAGACTAGCACAATGCGGCTTGGGGCAGATGTTATTGTTTTCAGTCGCTG
CACTAAGAGCAGTGGGCCTACACAATCCATTGGTCTCCTCTCTTACACTTTCTTGGTGGA
AACTGGACATACAGATGTTGTAGTTCCTGTGGTGGATTATAAATGCAATCTAATGAAAGG
ACAAACTCAACGACTGGAGCGTCATGGTTCGGAACAATTCTTCTCAAATTTGTCAGCATT
GTTGAAATGGTCCCCTTTTGCAACAGAAGAAGAGCTGATGCAGAATTTCTGTGACATTGG
TCCACATGGCACCAAGATTATAGTGTTCAATCTGTGGTCCAACGACGATGGTAATTTGGA
GCTCGACTTTGACACAGATCCGGAGGATATTATGATTAGTGGAGCGCCAAATCCAGAAGA
AATTAGAAATTCTGTAAAAAGGGCTAATGAGAACCATTTGGCAAATCGACTACGCTATTC
TCTTAGGGTCTATGCTTCTGTGTTGTATCTGCAGCTACCAGATTACTTTAGGATCATACT
TCGAGGGCAAGAAGTTAAGCGTCATCGCATTGCCGCTGACCTAATATATCCTGAATGCAT
CAGTTATAAACCACATAGTTGTGGAATAAAAGAGGCTACGGTTCTTACAACCATTGGATT
CTTAAAGGGTGCCCCAACTATTAGCGTGCACGGATTTAATATCTATCATAAAAATCGCCT
TATTTTGCCATTTCATAGAGTTCTGAATACTTCAAGCAGCAAAGGTAGAAGCGTCTCTGG
GGTGTTGGAGGTAGACTTCATCAAGCCCACTCATGACAAACAGGACTTTGAGAAGTCACA
GCTGTTCCAGAAGCTGATCAACCGCCTGAAGGAGATGACTAACGAGTACTGGGAACTTTA
CAGTGACAAGATTGGATACATGAAAAAGCCACGCGTGAGTGCAGCTCCTCTTCCTCCTCC
AGTAATGCTGCCGATAGCAAATGGCACTGCTGAACCATCAGATAGGAGCGCACCTGCTCC
GACGCAACCCTTGAGGTCGCACAGCAACTACTTGAATGCAGTTCCAATCGCCTCAGCGCC
CCCTGGTTTTCACTCAGCACCTGTCAAAGCAGAGAGCGTTGCACCAGGAGCGCATATGGG
CTACTCCCCGTCCTCGCTAAACGCGCAGACCATGCAAGTCAACGGGATAAAATCGCCTTC
CATGGTGCCTGCCACCGATTCGGTAGACACAAGAAAAAGGAGGAACGACGACACTACTAC
TATGACGGTCGCGTTTAAAAGGAAGGCTACGCAGGATTTGGCTGGCAGCAGCTGTGCTAC
TGATGAGACAAAACAGGTATCCGGGTATATGGGGATGGGAGAGCGAGAGACGAAGGAATT
TTGCTTCCTGAAGATGGAAAACCGGATGCTCCGTGAAGAGTGCTCGGATTTTGTTATGGC
AGAGAAGGCACTACGACTCAAGGAACAGAATTTACGGCTCGAGATTGAGAAGGCGCGGGA
GCAATTCAAGAGCCTACTGAACGAATACGTTTCGTTGTCAGCTACGCCGACACAGAAACG
GTAGGCATCGTCCCGAAGCCACCGGCCGTGGCCGGCGGCTTGTGCACTCGTGCTAGCTCT
TCACGACATGTGGGTATGTTCAGAATGCCAGAGAACCGAATGCTAGCAAGGAAGCGGTGA
TGCTTCTGGACGGCTTTGCCGGTGGCGGTGTAGACATAGCGCGAAAGGCGTGTGTACCAA
GCTCTCAGAAACTCGACTTTGGTTTATTCTCCAGTGTCGAGTGATTAGATACTGTACATA
CTTGTAAAACAAGAGGTCACCTTTTCTGTGTGACGAAAAAATATATATATTTCGAAAATT
GAGAAC