Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043185_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:190866499:190869969:1 gene:Zm00001d043185 gene_biotype:protein_coding transcript_biotype:protein_coding description:BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (sou /.../CBI BLink).
Sequence	ATGTTCGTCCTCCGCAAAACCCTCCTCCATGCGCCGCCGGCCGCCGCCGCGGCGGTCCCC TCTCGGATCTCTTCCCTCCTCCGCCTCATCCCCTCTGCATCTTTTTCTGAGGTAAGCGGA GGTGGGGAAGAATGGGGCGCCTCCTCACCCGGAGGCGGCGGCGGCAGGGGTGGGGGTGGG AACGAATGGAGCTCCACCTGGTCTACCGGCCTCACCAAGGACCATTTCGACGGATCCTCG CCCTCCGTCGGCCGTTCTGTCCCTTCCGAGTCAGCGCCCGTCTCTCGTGAGCGGGCGGCC ATTCGCGCTATGGATGAGTGGGACGAGAGGGTCCGGGAACTGGAGCGTAACAATGTCGAG GCGAAGGCGTATGTGGATTCATGGGACGACCGGATGCGGGAGACCTGTGCGCTGCTGAAG CAGGTGCGGGAGCCGGGCGCTCGGGGCTCGTATCTCAAGGACTCGGAGAAGCAGGAGATG TACCGGCTGCACAAGGAGGACCCCGCGACTTACACCGTGGAGCGGCTCGCCAAGGACTTC CGTGTCATGCGACAGCGCGTGCACGCCATCCTCTGGCTCAAGGAGATGGAAGAGGAAGAG GAGAGGAAGAGGGGCCAGCCGCTCGACGACTCCATCGAAATCCTGCTCGACAGCTGCCCA GAGTTCTTCAATTCTCATGACAGGGAATTTCATGTAGCATCTCTTCCATATAAACCTGAC TTCAAAGTAATGCCTGAGGACTGGGATGGCACAACACGAGATCCTGATGAGGTTCTATAT GAAATTTCAATGAAGGAAGATAAAATGTTGTATGAGGAATTCGTTCAACGCTTGGAATTC AACAAGAAGAAGGTGGCAGGAGAGGTTAAGTGCCACAAGTACAGCCGGCGCAAGCCAGAC AATGGATGGAGCTACATGGTCGAAAAGCTTGGTCCTCAGGGAAAGCGTGGTGGAGGAGGG GGCTGGAAGTTCATCAGCTTGCCTGATGGATCAAGCCGTCCACTAAATGATATGGAGAAG ATGTATGTTAAGCGGGAGACTCCAAAACGGCGGCGGAGGATAATTGCACCATACAAGTGA

Peptide Sequence

PEP ID	Zm00001d043185_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:190866499:190869969:1 gene:Zm00001d043185 transcript:Zm00001d043185_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (sou /.../CBI BLink).
Sequence	MFVLRKTLLHAPPAAAAAVPSRISSLLRLIPSASFSEVSGGGEEWGASSPGGGGGRGGGG NEWSSTWSTGLTKDHFDGSSPSVGRSVPSESAPVSRERAAIRAMDEWDERVRELERNNVE AKAYVDSWDDRMRETCALLKQVREPGARGSYLKDSEKQEMYRLHKEDPATYTVERLAKDF RVMRQRVHAILWLKEMEEEEERKRGQPLDDSIEILLDSCPEFFNSHDREFHVASLPYKPD FKVMPEDWDGTTRDPDEVLYEISMKEDKMLYEEFVQRLEFNKKKVAGEVKCHKYSRRKPD NGWSYMVEKLGPQGKRGGGGGWKFISLPDGSSRPLNDMEKMYVKRETPKRRRRIIAPYK

Transcript Sequence

Transcript ID	Zm00001d043185_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:190866499:190869969:1 gene:Zm00001d043185 gene_biotype:protein_coding transcript_biotype:protein_coding description:BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (sou /.../CBI BLink).
Sequence	ACCAGCGAAACCCCAGAATGTTCGTCCTCCGCAAAACCCTCCTCCATGCGCCGCCGGCCG CCGCCGCGGCGGTCCCCTCTCGGATCTCTTCCCTCCTCCGCCTCATCCCCTCTGCATCTT TTTCTGAGGTAAGCGGAGGTGGGGAAGAATGGGGCGCCTCCTCACCCGGAGGCGGCGGCG GCAGGGGTGGGGGTGGGAACGAATGGAGCTCCACCTGGTCTACCGGCCTCACCAAGGACC ATTTCGACGGATCCTCGCCCTCCGTCGGCCGTTCTGTCCCTTCCGAGTCAGCGCCCGTCT CTCGTGAGCGGGCGGCCATTCGCGCTATGGATGAGTGGGACGAGAGGGTCCGGGAACTGG AGCGTAACAATGTCGAGGCGAAGGCGTATGTGGATTCATGGGACGACCGGATGCGGGAGA CCTGTGCGCTGCTGAAGCAGGTGCGGGAGCCGGGCGCTCGGGGCTCGTATCTCAAGGACT CGGAGAAGCAGGAGATGTACCGGCTGCACAAGGAGGACCCCGCGACTTACACCGTGGAGC GGCTCGCCAAGGACTTCCGTGTCATGCGACAGCGCGTGCACGCCATCCTCTGGCTCAAGG AGATGGAAGAGGAAGAGGAGAGGAAGAGGGGCCAGCCGCTCGACGACTCCATCGAAATCC TGCTCGACAGCTGCCCAGAGTTCTTCAATTCTCATGACAGGGAATTTCATGTAGCATCTC TTCCATATAAACCTGACTTCAAAGTAATGCCTGAGGACTGGGATGGCACAACACGAGATC CTGATGAGGTTCTATATGAAATTTCAATGAAGGAAGATAAAATGTTGTATGAGGAATTCG TTCAACGCTTGGAATTCAACAAGAAGAAGGTGGCAGGAGAGGTTAAGTGCCACAAGTACA GCCGGCGCAAGCCAGACAATGGATGGAGCTACATGGTCGAAAAGCTTGGTCCTCAGGGAA AGCGTGGTGGAGGAGGGGGCTGGAAGTTCATCAGCTTGCCTGATGGATCAAGCCGTCCAC TAAATGATATGGAGAAGATGTATGTTAAGCGGGAGACTCCAAAACGGCGGCGGAGGATAA TTGCACCATACAAGTGACATGGACAACTTCAGTTTGCTGAAATGCAAATTTTCTCAACTG TCTTTTGACATTGTCCAGCGAGGCTGAAGCAAGAAACTGTGAAGTAGTTTGGAACCGCCA GAACAGCTCCTGTTTTTTTCACAGCACAGTAGATGGTTTGATGTGTTTTGTAACAAGGAT TATTTCCCCACATTTTGGCAGCCGAATAATTATCTTTTAAACTTTTCGGTGTTCCTCCCG TCTCTATGCACTGCCGAGCAACAATTCCAAGCCACGCGCGTCGTTACCCGTGCTGCAAGG AAAAACGCCTGTTGTACTTTTTGCACATATAAACATTTTGCACATATAAACATTTCTCTT AAGCAAACTCAAATTTCAT