Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043183_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:190815534:190816511:-1 gene:Zm00001d043183 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase RHC1A
Sequence	ATGTCCAATAGGGCCACACATTGGTGTTATGCCTGTCGGCGGCCAATTCGTCTCCGTGGG CAGGATATCGCATGCCCCAACTGCAATGATGGTTTTATCCAGGAAATTAGTGAGATGGGT GGCATATTGAACACTTATGGGCTAATTGAACCAGACTTTGAAGAGCGTCGAGCTAGAAGA TTCGGAATGATGGATGCCATGTCTTCCCTTATGCGGCAACGGATGGAAGAAATGGGAAGA GATGGTTTGTTTGATATTCGTGGTAGACAAGGAACAGGTACTGAATATGGAAGGAGGCCA ACTGCTGTTCCTACATTGGTATTTGGCGGCATCCCTTCTCCTGGAGTTGATAGCGGTGAT GTTAATGTTGTCCTCAGGGGAGGCCGCAGAGTTGGCGCTGCCCAACCAAATTTCAGTAGT TTAGTTGTTGGTCCCAGTCTGGAAGCCCTTTTTGAGCAGCTACTTCTCCAGAACAACCGT CAAGGCCCAGCACCTGCTCCACAGTCAGCTATTGACTCCATGCCTGTGGTAAAGATAAAC CGCAGGCATCTTGACGACGATCCACAGTGCGCAGTTTGCAAAGACAAATTCGAGGTTGGA GCAGAGGCACGGGAGATGCCATGCAAGCACCTGTACCATACTGACTGCATCATCCCCTGG CTGGTTCAGCACAATTCTTGCCCTGTTTGCCGCCATCCACTGCCATCACAGAGATCAGGC AGTACCAGTAGCGCCCGGCCTTCAGCTTACTACAACGAAGCCGCTGATCCTCCTGGGGTC ACCAGAGCAGATCTTGAACCTGCTCCAAGAGACGGTGGCAGGGAAAGCCAGGAAAGGCGC CGCTCCTTCTCGTTTCTGTGGCCGTTTGGCCCGTCGAGTTCCAGATCCAGTTCTTACCAG TACGAACAGAATGTTGATGAGCCTGCAGTATACGATCCAAACCAGATAGCATATTCTGAG TGGCACTATGACCACTGA

Peptide Sequence

PEP ID	Zm00001d043183_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:190815534:190816511:-1 gene:Zm00001d043183 transcript:Zm00001d043183_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase RHC1A
Sequence	MSNRATHWCYACRRPIRLRGQDIACPNCNDGFIQEISEMGGILNTYGLIEPDFEERRARR FGMMDAMSSLMRQRMEEMGRDGLFDIRGRQGTGTEYGRRPTAVPTLVFGGIPSPGVDSGD VNVVLRGGRRVGAAQPNFSSLVVGPSLEALFEQLLLQNNRQGPAPAPQSAIDSMPVVKIN RRHLDDDPQCAVCKDKFEVGAEAREMPCKHLYHTDCIIPWLVQHNSCPVCRHPLPSQRSG STSSARPSAYYNEAADPPGVTRADLEPAPRDGGRESQERRRSFSFLWPFGPSSSRSSSYQ YEQNVDEPAVYDPNQIAYSEWHYDH

Transcript Sequence

Transcript ID	Zm00001d043183_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:190815534:190816511:-1 gene:Zm00001d043183 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase RHC1A
Sequence	ATGTCCAATAGGGCCACACATTGGTGTTATGCCTGTCGGCGGCCAATTCGTCTCCGTGGG CAGGATATCGCATGCCCCAACTGCAATGATGGTTTTATCCAGGAAATTAGTGAGATGGGT GGCATATTGAACACTTATGGGCTAATTGAACCAGACTTTGAAGAGCGTCGAGCTAGAAGA TTCGGAATGATGGATGCCATGTCTTCCCTTATGCGGCAACGGATGGAAGAAATGGGAAGA GATGGTTTGTTTGATATTCGTGGTAGACAAGGAACAGGTACTGAATATGGAAGGAGGCCA ACTGCTGTTCCTACATTGGTATTTGGCGGCATCCCTTCTCCTGGAGTTGATAGCGGTGAT GTTAATGTTGTCCTCAGGGGAGGCCGCAGAGTTGGCGCTGCCCAACCAAATTTCAGTAGT TTAGTTGTTGGTCCCAGTCTGGAAGCCCTTTTTGAGCAGCTACTTCTCCAGAACAACCGT CAAGGCCCAGCACCTGCTCCACAGTCAGCTATTGACTCCATGCCTGTGGTAAAGATAAAC CGCAGGCATCTTGACGACGATCCACAGTGCGCAGTTTGCAAAGACAAATTCGAGGTTGGA GCAGAGGCACGGGAGATGCCATGCAAGCACCTGTACCATACTGACTGCATCATCCCCTGG CTGGTTCAGCACAATTCTTGCCCTGTTTGCCGCCATCCACTGCCATCACAGAGATCAGGC AGTACCAGTAGCGCCCGGCCTTCAGCTTACTACAACGAAGCCGCTGATCCTCCTGGGGTC ACCAGAGCAGATCTTGAACCTGCTCCAAGAGACGGTGGCAGGGAAAGCCAGGAAAGGCGC CGCTCCTTCTCGTTTCTGTGGCCGTTTGGCCCGTCGAGTTCCAGATCCAGTTCTTACCAG TACGAACAGAATGTTGATGAGCCTGCAGTATACGATCCAAACCAGATAGCATATTCTGAG TGGCACTATGACCACTGA