Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043174_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:190625724:190628445:1 gene:Zm00001d043174 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G138074 description:Cytochrome P450 98A3
Sequence

ATGGAGACGGCCTCCTTCCTCTCAGTGGCGCTGGCCCTGGCGGCCCTCGTCCCCGTCTCG
CTGCTCCTTGTGAACCGGCTCCTCTACGGCAAACTGCCCCCGGGGCCGCGGCGGCGTCCC
GTGGTGGGTAACCTGTTCGACGTGCAGCCCGTGCGGTGCCGGTGCTACCAGGAGTGGGCG
CGCCGGTACGGGCCCATCATGACGGTGTGGCTGGGCACGTCGCCCACGGTGGTGGTGTCC
ACGTCGGAGCTGGCCAAGGAGGTGCTCAAGACCCACGACCAGCAGCTCGCCGACCGCTGC
CGGGACCGCTCCACCGAGAGCTTCAGCCGAGGCGGCCAGGACCTCATCTGGGCCGACTAC
GGCCCCCACTACATCAAGGTGCGCAAGCTCTGCAACCTCGAGCTCTTCACGCAGCGCCGC
CTCGAGGCGCTCAGGCCCATCCGCGAGGACGAGGTCACCGCCATGGTCGAGTCCGTCTAC
AAAGCCGTCACCGCGCCTGGCAGTGCAGGGAAGCCGTTGGTTGTAAAGAACCACCTCTCG
ATGGTGGCCTTCAACAACATCACGCGGCTGGCCTTCGGGAAGCGGTTCGTGGACGCGGCC
GGCGAGCTGGACGAGCAAGGGCGCGAGTTCAAGGGGATCGTCCACAACGGCATCAAGATC
GGTGCGTCCCTCTCCATCGCGCAGCACATCCCGTGGCTACGCTGGCTGGCCCCGGTCGAC
GAGCAGGCCTTCAAAGCCCACGGCGAACGGCGCGACCGCCTCACCGTGAAGATCATGGAG
GAGCACGCCAGGGCCCTCAAGCAGCGCGGCGCCCAGCAGCACTTCGTCGACGCGCTCTTC
ACTCTCAGGGACAAGTACGACCTCAGCGATGACACCGTCATAGGCCTCCTCTGGGACATG
ATCACCGCCGGCACGGACACGACGGTGATCTCGGTGGAGTGGGCGATGGCGGAGCTGCTG
AGGAACCCCAGAGTGCAGGAGAAGCTGCAGGAGGAGCTGGACCGTGTCGTCGGCCGCGAC
CGGGTCCTGTCGGAGACGGACTTCCCGAACCTGCCTTACCTGCAGGCCGTCGTCAAGGAG
TCCCTGCGCCTGCACCCGCCGACGCCGCTGATGCTCCCCCACAGGGCCAGCGCCAGCGTC
AAGATCGCCGGCTACGACATCCCCAAGGGCGCCAACGTCGTCGTCAACGTGTGGGCGGTG
GCGCGCGACCCCGAGGTGTGGGACAGCCCGCTCGAGTTCCGGCCGGAGCGGTTCCTCCGG
GAGAACATCGACATCAAGGGCGCCGACTTCCGCGTGCTGCCGTTCGGCGCCGGCCGCCGG
GTGTGCCCCGGCGCGCAGCTCGGGATCAACCTCGTGGCGTCCATGATCGGCCACATGCTG
CACCACTTCACGTGGACGCTGCCGAGCGGGACCTGTCCCGAGGACGTGAGCATGATGGAG
TCCCCCGGGCTCGTCACCTTCATGGCCACGCCGCTGCAGGCCGTCGCCACGCCGCGCCTG
GACAAGGAGGAACTGTACAGGCGTGTCCCTTCGGACGTGTGA

Peptide Sequence

PEP ID

Zm00001d043174_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:190625724:190628445:1 gene:Zm00001d043174 transcript:Zm00001d043174_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G138074 description:Cytochrome P450 98A3
Sequence

METASFLSVALALAALVPVSLLLVNRLLYGKLPPGPRRRPVVGNLFDVQPVRCRCYQEWA
RRYGPIMTVWLGTSPTVVVSTSELAKEVLKTHDQQLADRCRDRSTESFSRGGQDLIWADY
GPHYIKVRKLCNLELFTQRRLEALRPIREDEVTAMVESVYKAVTAPGSAGKPLVVKNHLS
MVAFNNITRLAFGKRFVDAAGELDEQGREFKGIVHNGIKIGASLSIAQHIPWLRWLAPVD
EQAFKAHGERRDRLTVKIMEEHARALKQRGAQQHFVDALFTLRDKYDLSDDTVIGLLWDM
ITAGTDTTVISVEWAMAELLRNPRVQEKLQEELDRVVGRDRVLSETDFPNLPYLQAVVKE
SLRLHPPTPLMLPHRASASVKIAGYDIPKGANVVVNVWAVARDPEVWDSPLEFRPERFLR
ENIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMME
SPGLVTFMATPLQAVATPRLDKEELYRRVPSDV

Transcript Sequence

Transcript ID

Zm00001d043174_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:190625724:190628445:1 gene:Zm00001d043174 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G138074 description:Cytochrome P450 98A3
Sequence

GAATCACTGTCCAGTCGTGTCGATGACCCCTCCGCTGCGCCAACCAACCCACCCTGGTCC
ACGGGCGTCACGGCACTGCTACAGTGCTACAAACCAACTACCTACCACCACTCCGGCAGT
CCGGCTAGCTCCATAAAGGCGCAGCCGGCCGGCTGGCCGGTAGCAGTCAGCCAGCCAGCC
AGCCATGGAGACGGCCTCCTTCCTCTCAGTGGCGCTGGCCCTGGCGGCCCTCGTCCCCGT
CTCGCTGCTCCTTGTGAACCGGCTCCTCTACGGCAAACTGCCCCCGGGGCCGCGGCGGCG
TCCCGTGGTGGGTAACCTGTTCGACGTGCAGCCCGTGCGGTGCCGGTGCTACCAGGAGTG
GGCGCGCCGGTACGGGCCCATCATGACGGTGTGGCTGGGCACGTCGCCCACGGTGGTGGT
GTCCACGTCGGAGCTGGCCAAGGAGGTGCTCAAGACCCACGACCAGCAGCTCGCCGACCG
CTGCCGGGACCGCTCCACCGAGAGCTTCAGCCGAGGCGGCCAGGACCTCATCTGGGCCGA
CTACGGCCCCCACTACATCAAGGTGCGCAAGCTCTGCAACCTCGAGCTCTTCACGCAGCG
CCGCCTCGAGGCGCTCAGGCCCATCCGCGAGGACGAGGTCACCGCCATGGTCGAGTCCGT
CTACAAAGCCGTCACCGCGCCTGGCAGTGCAGGGAAGCCGTTGGTTGTAAAGAACCACCT
CTCGATGGTGGCCTTCAACAACATCACGCGGCTGGCCTTCGGGAAGCGGTTCGTGGACGC
GGCCGGCGAGCTGGACGAGCAAGGGCGCGAGTTCAAGGGGATCGTCCACAACGGCATCAA
GATCGGTGCGTCCCTCTCCATCGCGCAGCACATCCCGTGGCTACGCTGGCTGGCCCCGGT
CGACGAGCAGGCCTTCAAAGCCCACGGCGAACGGCGCGACCGCCTCACCGTGAAGATCAT
GGAGGAGCACGCCAGGGCCCTCAAGCAGCGCGGCGCCCAGCAGCACTTCGTCGACGCGCT
CTTCACTCTCAGGGACAAGTACGACCTCAGCGATGACACCGTCATAGGCCTCCTCTGGGA
CATGATCACCGCCGGCACGGACACGACGGTGATCTCGGTGGAGTGGGCGATGGCGGAGCT
GCTGAGGAACCCCAGAGTGCAGGAGAAGCTGCAGGAGGAGCTGGACCGTGTCGTCGGCCG
CGACCGGGTCCTGTCGGAGACGGACTTCCCGAACCTGCCTTACCTGCAGGCCGTCGTCAA
GGAGTCCCTGCGCCTGCACCCGCCGACGCCGCTGATGCTCCCCCACAGGGCCAGCGCCAG
CGTCAAGATCGCCGGCTACGACATCCCCAAGGGCGCCAACGTCGTCGTCAACGTGTGGGC
GGTGGCGCGCGACCCCGAGGTGTGGGACAGCCCGCTCGAGTTCCGGCCGGAGCGGTTCCT
CCGGGAGAACATCGACATCAAGGGCGCCGACTTCCGCGTGCTGCCGTTCGGCGCCGGCCG
CCGGGTGTGCCCCGGCGCGCAGCTCGGGATCAACCTCGTGGCGTCCATGATCGGCCACAT
GCTGCACCACTTCACGTGGACGCTGCCGAGCGGGACCTGTCCCGAGGACGTGAGCATGAT
GGAGTCCCCCGGGCTCGTCACCTTCATGGCCACGCCGCTGCAGGCCGTCGCCACGCCGCG
CCTGGACAAGGAGGAACTGTACAGGCGTGTCCCTTCGGACGTGTGAGCCGTCGGCGTCCT
GGCATCTGCTGCGTTCCCTGTTTTGAAACCTGCTGCTGCTGTTGCGAATTTGTGTACCAT
TAACTATTCGCTGGTGATGTACGTGTCATAGTCGTGTACGAGCATTTTGTGTACTGCAGA
ACTTGATCGCTGAGCATACACTTTTGCCCGGTAGTAATTTACAATTTCAGCATTGCAAAT
TACTATTAGTACGTCGCAGAAAACAGTGTAAAGCTCGAAATTGAGACCTCGCGAATATGC
ACCAGCCTCCTCG