Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043164_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:190397962:190400788:1 gene:Zm00001d043164 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclin-B1-4
Sequence

ATGGCCTCGCGCAACCACAACGCCGCCGCTCCGCAGCTTCACCATCACAACCGAGGAGGG
GGACGGTGCTTCTTGCGGGGAATTCTTACCCTCTGGAGCAAACGTTCCTTGGCTCCAATG
ATTCTTACGACGAACATCTCGTGCCATGCTGACCTCCTCCTGTCTCTCGTGCGATGGTCA
GCCGGTGTTCCCGCTCTTGGAAAGACCAAGGCCGTGCCCGCCCGACCTGACGCTCTGAAC
CGGCGACCCCCTCTCGGCGATATCGGCAACCTCGTCAGCGTCCGCCCAGCCACAGGGAAC
CCGCAGGAGCAGGTCAACCGCCCCATCACTAGAAGCTTCGGCGCTCAACTCGTCAAGAAA
GCGCAGGCGAAGGCCGCAATCAAGAATGCCGCAATCCTGCCTGCGAGGCATGCGCCGAGG
CAGGAGAGGAAGGCTCCTGTCAAGCAGCACCCGCCGCCGGAGGATATCATAGTACTCAGC
TCCGATTCTGAACAGAGCAGGGCGCAGTCCGAGAGCAGCGCTAGCTCCGTCCGCTCCAGG
AGGAAGGCCATCAACACCCTTTCTTCCGTGCTCTCGGCTCGCTCAAAGGCTGCCTGTGGA
ATCGCTGGTAAGCCTAGACAAGTGGTCGATGACATCGACAAGCTGGACGTCAACAATGAG
CTCGCGGTGGTGGAATACATTGAGGACATCTACACGTTCTACAAGATTGCTCAGCACGAG
AGACGGCCATGTGACTACATCGACGCCCAACTCGAGATCAACTCTAAGATGAGGGCTATC
CTGGCTGATTGGATAATCGAAGTACACCACAAGTTTGAACTGATGCCCGAAACTCTCTAC
CTGACCATGTACATCATCGATCAGTACCTCTCGCTGCAACCAGTCCTGCGTAAGGAGCTG
CAGCTTGTCGGCGTTTCATCTATGCTGATCGCCTGCAAGTACGAGGAGATTTGGGCCCCA
GAGGTGAACGACTTCATCCTCATATCAGACAGTGCATACAGTAGAGAACAGATTCTTTCG
ATGGAGAAGGGAATTCTGAATAGGCTGGAGTGGAACCTGACTGTCCCTACAGTGTATATG
TTCCTTGTCCGTTTTCTGAAGGCCGCAACATTGGGCGGCAAAGTTGAGAAAGAGATGGAG
AATATGGTGTTCTTCTTCGCTGAATTGGCGCTGATGCAATACGATTTGGTGACGCGCCTG
CCATCGCTGGTCGCTGCTTCTGCTGTCTACGCAGCCAGACTCACTCTCAAGAGGGCTCCC
CTTTGGACCGACACCCTCAAGCACCACACGGGCTTCAGGGAGTCAGAGGCAGAGCTCATT
GAATGCACGAAGATGCTGGTGATCGCGCACTCGACTGCCCCTGAGAGCAAGCTGAGGGTT
GTATACAAGAAGTATTCCAGCGAGCAGTTCGGAGGGGTCGCGCTGCGTCCACCCGCAGAG
GAGATCTGCAAGTGA

Peptide Sequence

PEP ID

Zm00001d043164_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:190397962:190400788:1 gene:Zm00001d043164 transcript:Zm00001d043164_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclin-B1-4
Sequence

MASRNHNAAAPQLHHHNRGGGRCFLRGILTLWSKRSLAPMILTTNISCHADLLLSLVRWS
AGVPALGKTKAVPARPDALNRRPPLGDIGNLVSVRPATGNPQEQVNRPITRSFGAQLVKK
AQAKAAIKNAAILPARHAPRQERKAPVKQHPPPEDIIVLSSDSEQSRAQSESSASSVRSR
RKAINTLSSVLSARSKAACGIAGKPRQVVDDIDKLDVNNELAVVEYIEDIYTFYKIAQHE
RRPCDYIDAQLEINSKMRAILADWIIEVHHKFELMPETLYLTMYIIDQYLSLQPVLRKEL
QLVGVSSMLIACKYEEIWAPEVNDFILISDSAYSREQILSMEKGILNRLEWNLTVPTVYM
FLVRFLKAATLGGKVEKEMENMVFFFAELALMQYDLVTRLPSLVAASAVYAARLTLKRAP
LWTDTLKHHTGFRESEAELIECTKMLVIAHSTAPESKLRVVYKKYSSEQFGGVALRPPAE
EICK

Transcript Sequence

Transcript ID

Zm00001d043164_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:190397962:190400788:1 gene:Zm00001d043164 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclin-B1-4
Sequence

ACGCTCGTTTATATCTGCGCCTCCTCCACTCGCCGAGACAATAGCCTCTCCTCGCACCCC
CTCAAGAACTGTACCCATCACGCGCCGCCATCGATTGACCTTGACCGACCCGACCACCCA
TCACGCTTCTTGTTGCCGCCGCTGTTGCTTGCCGATACGCGGTGGCTGCGCTCGCCGGCG
GGGAAGAGGGGTCGCGGGCTGCGCGCCTCCAGTCTTTCTTCGCCTCCGTGCTCTCGGGCC
TCTTCGGCCAGGCCGACCAGGACGAGGACCAAGAGATGGCCTCGCGCAACCACAACGCCG
CCGCTCCGCAGCTTCACCATCACAACCGAGGAGGGGGACGGTGCTTCTTGCGGGGAATTC
TTACCCTCTGGAGCAAACGTTCCTTGGCTCCAATGATTCTTACGACGAACATCTCGTGCC
ATGCTGACCTCCTCCTGTCTCTCGTGCGATGGTCAGCCGGTGTTCCCGCTCTTGGAAAGA
CCAAGGCCGTGCCCGCCCGACCTGACGCTCTGAACCGGCGACCCCCTCTCGGCGATATCG
GCAACCTCGTCAGCGTCCGCCCAGCCACAGGGAACCCGCAGGAGCAGGTCAACCGCCCCA
TCACTAGAAGCTTCGGCGCTCAACTCGTCAAGAAAGCGCAGGCGAAGGCCGCAATCAAGA
ATGCCGCAATCCTGCCTGCGAGGCATGCGCCGAGGCAGGAGAGGAAGGCTCCTGTCAAGC
AGCACCCGCCGCCGGAGGATATCATAGTACTCAGCTCCGATTCTGAACAGAGCAGGGCGC
AGTCCGAGAGCAGCGCTAGCTCCGTCCGCTCCAGGAGGAAGGCCATCAACACCCTTTCTT
CCGTGCTCTCGGCTCGCTCAAAGGCTGCCTGTGGAATCGCTGGTAAGCCTAGACAAGTGG
TCGATGACATCGACAAGCTGGACGTCAACAATGAGCTCGCGGTGGTGGAATACATTGAGG
ACATCTACACGTTCTACAAGATTGCTCAGCACGAGAGACGGCCATGTGACTACATCGACG
CCCAACTCGAGATCAACTCTAAGATGAGGGCTATCCTGGCTGATTGGATAATCGAAGTAC
ACCACAAGTTTGAACTGATGCCCGAAACTCTCTACCTGACCATGTACATCATCGATCAGT
ACCTCTCGCTGCAACCAGTCCTGCGTAAGGAGCTGCAGCTTGTCGGCGTTTCATCTATGC
TGATCGCCTGCAAGTACGAGGAGATTTGGGCCCCAGAGGTGAACGACTTCATCCTCATAT
CAGACAGTGCATACAGTAGAGAACAGATTCTTTCGATGGAGAAGGGAATTCTGAATAGGC
TGGAGTGGAACCTGACTGTCCCTACAGTGTATATGTTCCTTGTCCGTTTTCTGAAGGCCG
CAACATTGGGCGGCAAAGTTGAGAAAGAGATGGAGAATATGGTGTTCTTCTTCGCTGAAT
TGGCGCTGATGCAATACGATTTGGTGACGCGCCTGCCATCGCTGGTCGCTGCTTCTGCTG
TCTACGCAGCCAGACTCACTCTCAAGAGGGCTCCCCTTTGGACCGACACCCTCAAGCACC
ACACGGGCTTCAGGGAGTCAGAGGCAGAGCTCATTGAATGCACGAAGATGCTGGTGATCG
CGCACTCGACTGCCCCTGAGAGCAAGCTGAGGGTTGTATACAAGAAGTATTCCAGCGAGC
AGTTCGGAGGGGTCGCGCTGCGTCCACCCGCAGAGGAGATCTGCAAGTGAACGAAGGCTA
CTTTATCCGTGTTTGCCTATTGCTTGCTTTAGGGGAAGTGGCGATGGAAGGCGAGTCTGA
CATTCGCTAGGCTTTTTTATGTTTGCTTGTTTCAGACAGCCGTTTGTTTGCTAGGCTGTT
CTCAGAGTCGGTTGTTATCTGACTTGTGATGGCAACTATAATTCTATCTAGTACAACATT
TTTATTCATAAATGTGAATGGTGTTTTACAAGGTGCT