Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043155_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:3:190313666:190317448:1 gene:Zm00001d043155 gene_biotype:protein_coding transcript_biotype:protein_coding description:las1-like family protein
Sequence

ATGAAGTATGTCAGACGGCTTTACTACGCTTGTCCCTCTGAGGTGGTCTCTGTTCTATTG
GATCTTATGGAACTGGATGCTGCAGGCTTTGAAAGCAGTGACATGCAAGAAACTGATAGT
TTGTCTGTTAACCACTCATCTGACACTCAATTATCAATCAGTGACATGAAAACTATCATA
CTGAAACTTTCAGAGAAGGAACCAAGACTGCTGCTTAGTGTACTAAAGTCTGTAATTGAA
ATGATTGACGCCAAGGAAGATCTCGCATATAAAGATGAATCTCGTTCGTGTCTGCCAGCT
GGGCCATCCAAAGCGAAAGGATTATGTCCCTTGGTTCTATGGCTTGTCACAAACATTAAA
GAGCATAAGGATTCAGGCTACATTGGACTTGTTCACGAGAAAGGGGTACTTTCTTCAGAC
AAGAATGCAATCCCTCATTTTTGCCTTGCAAAACTTCTGCAGAAGTTATTGAATCTATCC
ACTACAAGTGAAAGATATCTCATAGACGCAGCATGGTTGTTGATTGAAATGGTCAACGAT
AGTAATACGAAGGAGAAATTGAGGAAACTTCCTGTGTTGTCTCTGGGAAGGATGGCTAAA
TCTTCTTCCCTCCCAGATTCAAGAACCATATGCAACGAACAGGGATCAGTTGAAAACGCA
ACAGAGACACTCGAATTATTCAAAGTGCAGTTGAAGAGGCAGAAGAATGGTGGCACTGAA
GGATCATTCAGTACGAGCACCCCAAAGAAACATGACAGGTGGTCCATAGCAAAATCATGG
ACTCCCTGTCCAATAGGAACAGCACCCTGTTCATTTAGTTCATGTGCTGTTCTTCCTGCC
TTTGACAGCATCGGTCATGAACAAAATTCTACATTAGAACATGGGACCTTTGAGGAGGTT
GATCATTCTGAAAGGTTTGAGCCTCAGCCCGAGGAGTTGGAGGATGAAAGCATTCTGGAA
ATGCCAAGGTCATCACCAGAAAATGAAATTTCAGACGTTAAAGAATTGATGTGTCCTTTG
AAGGGTAGATTGTTGGTCGGTGGCTTTTGGAAAATGGTAGACGAAGAGGAGCTGCTCTTG
ATAAAATCGAAGATGAAAATTTTGTTGTAA

Peptide Sequence

PEP ID

Zm00001d043155_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:3:190313666:190317448:1 gene:Zm00001d043155 transcript:Zm00001d043155_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:las1-like family protein
Sequence

MKYVRRLYYACPSEVVSVLLDLMELDAAGFESSDMQETDSLSVNHSSDTQLSISDMKTII
LKLSEKEPRLLLSVLKSVIEMIDAKEDLAYKDESRSCLPAGPSKAKGLCPLVLWLVTNIK
EHKDSGYIGLVHEKGVLSSDKNAIPHFCLAKLLQKLLNLSTTSERYLIDAAWLLIEMVND
SNTKEKLRKLPVLSLGRMAKSSSLPDSRTICNEQGSVENATETLELFKVQLKRQKNGGTE
GSFSTSTPKKHDRWSIAKSWTPCPIGTAPCSFSSCAVLPAFDSIGHEQNSTLEHGTFEEV
DHSERFEPQPEELEDESILEMPRSSPENEISDVKELMCPLKGRLLVGGFWKMVDEEELLL
IKSKMKILL

Transcript Sequence

Transcript ID

Zm00001d043155_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:190313666:190317448:1 gene:Zm00001d043155 gene_biotype:protein_coding transcript_biotype:protein_coding description:las1-like family protein
Sequence

GGCGCTTCGTGCGTGACGGCCTCTTCTCCCCCTTCCCCGCCGCCGCTCTTCGCAGGATTG
CGGCGTGGCGGAGCAGGGGTTCCCTCCCGATCCCCGTGGACGTCACCGCCGCCTTCGTCG
ATATACGGCTGCGGGATCCCTTCTTCCGGAACGGATTGGCTGGTGATGATGCACTGGACT
CAGAGGAGATGCTTGCGATGCTGTACAGCATGGCAATCATGAGGCTTGTAAATGGTTTTG
TGGAGAATCCGTATAAGAAAACTGGCCTTTCAATATCTGAACTAGCTGATGCTGTTGGAA
TACCACGAGTTCTGGTTGACATTCGTCATGAGAGTTCCCATCGTAGTCTTCCCTCTCTAC
GACTGTTACGCTTGGCAAGCATTAAGGCATTTGATTGGTTGAAGTGTATTTACTGGGATC
GCCAGACCAATTCAATTCCTGATGTTCAAGCAGAACTGAGGTTGAGACTGCATGAAATTG
CTCGCTTTCTGAAGGAGAATAATTCACAAGAATCAAAACCAGGGTCTAAAAGGAAACGTG
AGTATCGGCAGAGTTTTGAGGCTGCAGGCAGATATAGGTCTTATCTGCTTGGAGCTGCAC
ATTCTGTATAGTTAATGGCAAGATGGCTTTTCTTGGTTAAGAGTAATGTGACTAATTCCT
GCTTGGCATTGAGAATTTTCTGGTTGACTTGCTGTTTGGTTGGTTAGGGATGCATTTCCA
CGGTCAAATATAATAGTTCTCTCTTGACAATACTCATTTTTTTTGCTGTTAGATTTGACT
AGTTAGAAAGTTCATATCTACAATTTTTGATAATGTGCAACTTCAGAGTAAATACAAATG
CAACACCATTTCTATGATTAAGTACTAACTATTAAACTTAACAATACAACTATAAATCTT
GAACCCATTAGGATATAGTGCCCATTTGACTTTCCAGATTGGTATGGCATCCTTTGATCA
ATACATTGCAGTTTGCAAGGAAGATTAATGACCTGTATTTTTTTCGTGATGCCAACATTA
CTCTAGGATTAGGCTCTAGAAGGTGCGAAAGATGCACCACCACATGAAAAATTTAACATT
TCTTATATTTTCCATTAATCTGAACTTCTTTTTTCCGCATATATAGGTGCATGTTTGTAA
CTGAACATTATCATTTATTTGCTACAATCAACTCATCTACTTTCTGAATATTTATATTGT
GAATGTGTGATAGTTTTATTAGAGAAGATGAGTAAAGTTCCAATATTGATAGATAACTTT
TAAATTACAGGTTCTGAGAAACTGGTATCGAAAGCCATGAAGTATGTCAGACGGCTTTAC
TACGCTTGTCCCTCTGAGGTGGTCTCTGTTCTATTGGATCTTATGGAACTGGATGCTGCA
GGCTTTGAAAGCAGTGACATGCAAGAAACTGATAGTTTGTCTGTTAACCACTCATCTGAC
ACTCAATTATCAATCAGTGACATGAAAACTATCATACTGAAACTTTCAGAGAAGGAACCA
AGACTGCTGCTTAGTGTACTAAAGTCTGTAATTGAAATGATTGACGCCAAGGAAGATCTC
GCATATAAAGATGAATCTCGTTCGTGTCTGCCAGCTGGGCCATCCAAAGCGAAAGGATTA
TGTCCCTTGGTTCTATGGCTTGTCACAAACATTAAAGAGCATAAGGATTCAGGCTACATT
GGACTTGTTCACGAGAAAGGGGTACTTTCTTCAGACAAGAATGCAATCCCTCATTTTTGC
CTTGCAAAACTTCTGCAGAAGTTATTGAATCTATCCACTACAAGTGAAAGATATCTCATA
GACGCAGCATGGTTGTTGATTGAAATGGTCAACGATAGTAATACGAAGGAGAAATTGAGG
AAACTTCCTGTGTTGTCTCTGGGAAGGATGGCTAAATCTTCTTCCCTCCCAGATTCAAGA
ACCATATGCAACGAACAGGGATCAGTTGAAAACGCAACAGAGACACTCGAATTATTCAAA
GTGCAGTTGAAGAGGCAGAAGAATGGTGGCACTGAAGGATCATTCAGTACGAGCACCCCA
AAGAAACATGACAGGTGGTCCATAGCAAAATCATGGACTCCCTGTCCAATAGGAACAGCA
CCCTGTTCATTTAGTTCATGTGCTGTTCTTCCTGCCTTTGACAGCATCGGTCATGAACAA
AATTCTACATTAGAACATGGGACCTTTGAGGAGGTTGATCATTCTGAAAGGTTTGAGCCT
CAGCCCGAGGAGTTGGAGGATGAAAGCATTCTGGAAATGCCAAGGTCATCACCAGAAAAT
GAAATTTCAGACGTTAAAGAATTGATGTGTCCTTTGAAGGGTAGATTGTTGGTCGGTGGC
TTTTGGAAAATGGTAGACGAAGAGGAGCTGCTCTTGATAAAATCGAAGATGAAAATTTTG
TTGTAATATAATCTTCAATGGTTGAGGACCGGGCGTAGTCCGGGTGGTGAAGGCGGCGAG
GTCCCCTTGACCAGGTTGGGGGGTTCGACCCCCCTGATTGCTCACCAAAAAATCCCCTCG
TCCTCACCCACACCTGGGTGGGCCTTTGCAGTGTGGGCAGCCTGTGAGTCGACACGTTAG
TGACAGGAGTTGTTGGATTCGGGGGTTTCTCGTCGGGACCGTTCGCTGCGACCTTCTACC
CATGAAAAGCCACGAGGGTGGTCTTATTACCCTCCCGGTCGAGTTTTAATCTTCAATGGT
TGTGACCAAACAATGTTGTGGGTCTTGAGTTTCTTCACTATTTGTTCTGGTTCTCAAATT
TTTGTTTGTTACTTAGGGGTGTTTGAATGCACTAAAACTAATAGTTAGCAGCTAAAATTA
GTTGAGACATCCAAACATCCTAGCTAATAGTTCAACTATTAGCTATTTTTAGTAAATTAG
TTAATAGTTAGAGCATCTCCAAGAGACT