Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043149_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:190157114:190162325:-1 gene:Zm00001d043149 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat (LRR) family protein
Sequence

ATGGCGGCGGGGGCGGGGGCGAGGGCGAAGGCAGCGGGAGCCCTGGCGCTGGCGCTCGTG
CTCGCGCTAGCGGGGGCCAACTCCGAGGGCGACGCGCTCTCGGCGCTGCGCCGCAGCCTC
AGGGACCCCGGCGGCGTGCTGCAGAGCTGGGACCCCACGCTCGTCAACCCCTGCACCTGG
TTCCACGTCACCTGCGACCGCGACAACCGCGTCACCCGCCTAGATCTTGGTAATTTGAAC
TTATCTGGTCATCTGGTGCCTGAGCTTGGGAAATTGGAGCATCTGCAGTACCTGGAACTT
TACAAGAACAGCATTCAAGGAACAATCCCTTCTGAGCTTGGTAATTTGAAGAATCTAATA
AGCTTGGACTTGTACAAGAACAACATTTCGGGGACAATACCTCCTTCCCTTGGAAAGTTG
AAATCCCTTGTATTCCTGCGGCTCAATGGCAATCATTTGACTGGGCCGATCCCAAGGGAA
CTTTCTGGAATATCTAGTCTCAAAGTTGTCGATGTTTCAAGCAATGATTTATGTGGGACG
ATTCCCACATCTGGACCATTTGAGCACATTCCTCTGAGCAACTTTGAGAAGAACCCACGC
TTGGAAGGTCCAGAGCTACAAGGCCTGGCCATATATGACACCAACTGCTAG

Peptide Sequence

PEP ID

Zm00001d043149_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:190157114:190162325:-1 gene:Zm00001d043149 transcript:Zm00001d043149_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat (LRR) family protein
Sequence

MAAGAGARAKAAGALALALVLALAGANSEGDALSALRRSLRDPGGVLQSWDPTLVNPCTW
FHVTCDRDNRVTRLDLGNLNLSGHLVPELGKLEHLQYLELYKNSIQGTIPSELGNLKNLI
SLDLYKNNISGTIPPSLGKLKSLVFLRLNGNHLTGPIPRELSGISSLKVVDVSSNDLCGT
IPTSGPFEHIPLSNFEKNPRLEGPELQGLAIYDTNC

Transcript Sequence

Transcript ID

Zm00001d043149_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:190157114:190162325:-1 gene:Zm00001d043149 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat (LRR) family protein
Sequence

CTACCACCACTACCAAGCAGGCAAGCACCAGCCAGCCACCCGCCCACCCCACCACTCCAC
CGGGCAGGCATCCAGCGACGGACCGGGCAGGCAGAGAAAAGCAGACCAGACGAGACGTCG
TGCGTCGCGTCCTCCCTGCCGTTCCCCTTCTTCAGTTCTCCCGCTGCTGCTGCCGCTGCC
ACCCTCCGTCCGCGTCCAGATCCCGCCACCCCAATCGATCTGCCGGCCTCCAGCATGGCG
GCGGGGGCGGGGGCGAGGGCGAAGGCAGCGGGAGCCCTGGCGCTGGCGCTCGTGCTCGCG
CTAGCGGGGGCCAACTCCGAGGGCGACGCGCTCTCGGCGCTGCGCCGCAGCCTCAGGGAC
CCCGGCGGCGTGCTGCAGAGCTGGGACCCCACGCTCGTCAACCCCTGCACCTGGTTCCAC
GTCACCTGCGACCGCGACAACCGCGTCACCCGCCTAGATCTTGGTAATTTGAACTTATCT
GGTCATCTGGTGCCTGAGCTTGGGAAATTGGAGCATCTGCAGTACCTGGAACTTTACAAG
AACAGCATTCAAGGAACAATCCCTTCTGAGCTTGGTAATTTGAAGAATCTAATAAGCTTG
GACTTGTACAAGAACAACATTTCGGGGACAATACCTCCTTCCCTTGGAAAGTTGAAATCC
CTTGTATTCCTGCGGCTCAATGGCAATCATTTGACTGGGCCGATCCCAAGGGAACTTTCT
GGAATATCTAGTCTCAAAGTTGTCGATGTTTCAAGCAATGATTTATGTGGGACGATTCCC
ACATCTGGACCATTTGAGCACATTCCTCTGAGCAACTTTGAGAAGAACCCACGCTTGGAA
GGTCCAGAGCTACAAGGCCTGGCCATATATGACACCAACTGCTAGAGGGGGCACCACGAA
CAAAAGAATCGCTAGGAAGAAATGGGCGAACAAGGTTACCAAAAAGTCTGGTTCTGCTGC
CACTCTGTAATCCCCCCTGCATAGCTCTTATTTGTAACTTGCTGTCTGCACGAAAGTTGG
TGGATGTTTTAGCAGAATGCTTTCTGCCCGTGAAAGTAAACTTGAAACTGCTTATTATGA
GTGAAATGATGATGTTATTTCCCTTGCCA