Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043135_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:3:189967927:189971654:-1 gene:Zm00001d043135 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:set domain gene113 description:Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH3
Sequence	ATGTCTTCAAGGGGAGGAACTCAACTACTGCAGGTTGAGATGAACGGTCCATCGAATTTC ATGCCTACTCCTGAACAGGATGTTCTGGACGTCAAGCCCTTGAGGACATTGGCTCCAATG TTCCCTGCTCCTCTGGGTGTCAATACATTTAACCACTCAACCACGCCACCATTGATATTT GTCACTCCTTCTGGACAATTTCAAGGGGGTTTTGGTGATTGGAATAATTCTGCTGCCAAA TCATTTTTCGCTTTCAGCAGCAAGGATGCTCGTGGAGGCAAGGCTGATACATTTAGTGAT CAGAATACTGGTACTGGCAAGGCTGCCACTTTTGGTGATCAGGATGCTTTTGGCAGCCAG AATGTTTTTGCTAGTGATCACAGTACTGGTACTGGCAAGGCTGCCACTTTTGGTGATCAG GATGCTTTTGGCAGCCAGAATGTCGCCACTGGTGTGCAGGATGCTGCGAAAGGCCAGACT GCAACAGATTGGACAGATGTGAGTGCCAATCCTAATGGCCCAATTGATGCCATTGCCATT TCAGCTTACAGGTCAACACAGCCTAATGTTATATCACTGGATGATGATGATGACGACGAC GATGATGAGCCTTATGCTGCTAACAAGACATCAGCATCTGGACGCAAGATCAAGAGGCCA TCCCACCTCAGCGGATACAATGTGAGTGATGCTTTGGTAAGTGACAGCTCCAACAGCATG AAGGTTAAGCGCCCCAAATCCTCTCACGGGAAAGCTGCTGCTGACAACGAGCATGCCTTG CTTCCACCTTCTGAGGATCCCAGGGAAATTGTGGAGGCAGTTCTCATGACCTTTGAGGCG TTGCGGCGTAGGCATCTCCAATTGGATGAGGCACAAGAGACTAGCAAGCGTGCAGATCTG AAGGCTAGTGCTATCTTGATGTCCAGTAATATCAGGGCTAACCCTGGGAAGAGGATAGGG GTTGTTCCTGGAGTTGAAATAGGGGACATTTTCTACTTCAGGATGGAGCTATGTATTATT GGGCTGCATGCTCCTAGCATGGCCGGAATTGACTATATGACTGCCAAGTTTGGTGACGAG GATGATTCTGTTGCAATATGTATTGTTGCTGCAGGTGGTTATGACAATAATGATGATGAT ACAGATGTACTGGTTTACAGTGGTTCAGGAGGTAATAGCAAGAACAGTGAGGAGAAGCAT GACCAGAAGCTTGAGAGGGGCAACCTGGCTCTTGAGAGGAGCTTGTCCAGAAAAAATGTA ATCCGTGTGGTTCGGGGCTATAAGGATCCAGGTTGCTTGACTGGGAAGGTTTATATTTAT GATGGCCTCTATAGGATTCACGAGTCATGGAAGGAGAAAACGAAGAGTGGAATATTTTGT TTTAAGTACAAGCTGCTGCGAGAGCCAGGACAACCTGATGGGGTTGCAATCTGGAAGATG TCCCAGAAATGGGTACAAAATCCACTGACTAGAGGCAGTGTTTTAAATCCTGATCTATCA TCTGGTGCAGAAAATCTTCCAGTGTGTCTTGTTAATGACATTGACAGTGATGAAGTGCCA CACCATTTCACATATACCACTCAGGTCGAACACTTGAAACCACTCAGTTCTGTGAAGCCT TTACAGGGTTGCAGATGCCTTAGTGTTTGTCTGCCTGGTGATGCCAACTGCTGCTGTGCA CAGCGTAATGGAGGCAGCTTACCTTACAGCTCATCAGGACTGCTTGTATGCCGCAAGACT ATGGTTTATGAATGTGGTGAATCCTGTCGGTGTTCTTTCAATTGTCGTAACAGAGTGACC CAGAAAGGAGTTAGGATCCACTTTGAGGTCTTTAAGACGGGAAATCGAGGCTGGGGTCTT CGTTCGTGGGACGCTATACGGGCTGGTTCATTTATATGCGAGTATGTTGGTGAGGTTATT GATGATGCTAACATTAATCTGAATGATATTGAAGATGATTATATATTTCAGATGTCGTGT CCTGGTGAGAGGACATTAAAATGGAATTTTGGACCTGAATTGATAGGGGAGCAAAGCACA AATGTTTCTGCTGATACCTTTGAGACTCTACCCATTAAGATAAGTGCTAAAAGAATAGGA AACATATCACGTTTCATGAACCATAGTTGTGCTCCTAACGTATTTTGGCAGCCAGTTCAG TTTGACCATGAAGATGATCATCGCCCACATATCATGTTCTTTGCTTTGAAGCATATTCCT CCCATGACAGAGTTGACTTATGACTATGGTGACGTTGGAGCTGATCCTAGTGGTGTACGG TCTCCTAGAGCAAAGAACTGCCTTTGTGAATCCTCAAATTGTCGGGGATTCTTTATCTGA

Peptide Sequence

PEP ID	Zm00001d043135_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:3:189967927:189971654:-1 gene:Zm00001d043135 transcript:Zm00001d043135_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:set domain gene113 description:Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH3
Sequence	MSSRGGTQLLQVEMNGPSNFMPTPEQDVLDVKPLRTLAPMFPAPLGVNTFNHSTTPPLIF VTPSGQFQGGFGDWNNSAAKSFFAFSSKDARGGKADTFSDQNTGTGKAATFGDQDAFGSQ NVFASDHSTGTGKAATFGDQDAFGSQNVATGVQDAAKGQTATDWTDVSANPNGPIDAIAI SAYRSTQPNVISLDDDDDDDDDEPYAANKTSASGRKIKRPSHLSGYNVSDALVSDSSNSM KVKRPKSSHGKAAADNEHALLPPSEDPREIVEAVLMTFEALRRRHLQLDEAQETSKRADL KASAILMSSNIRANPGKRIGVVPGVEIGDIFYFRMELCIIGLHAPSMAGIDYMTAKFGDE DDSVAICIVAAGGYDNNDDDTDVLVYSGSGGNSKNSEEKHDQKLERGNLALERSLSRKNV IRVVRGYKDPGCLTGKVYIYDGLYRIHESWKEKTKSGIFCFKYKLLREPGQPDGVAIWKM SQKWVQNPLTRGSVLNPDLSSGAENLPVCLVNDIDSDEVPHHFTYTTQVEHLKPLSSVKP LQGCRCLSVCLPGDANCCCAQRNGGSLPYSSSGLLVCRKTMVYECGESCRCSFNCRNRVT QKGVRIHFEVFKTGNRGWGLRSWDAIRAGSFICEYVGEVIDDANINLNDIEDDYIFQMSC PGERTLKWNFGPELIGEQSTNVSADTFETLPIKISAKRIGNISRFMNHSCAPNVFWQPVQ FDHEDDHRPHIMFFALKHIPPMTELTYDYGDVGADPSGVRSPRAKNCLCESSNCRGFFI

Transcript Sequence

Transcript ID	Zm00001d043135_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:189967927:189971654:-1 gene:Zm00001d043135 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:set domain gene113 description:Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH3
Sequence	ATGTCTTCAAGGGGAGGAACTCAACTACTGCAGGTTGAGATGAACGGTCCATCGAATTTC ATGCCTACTCCTGAACAGGATGTTCTGGACGTCAAGCCCTTGAGGACATTGGCTCCAATG TTCCCTGCTCCTCTGGGTGTCAATACATTTAACCACTCAACCACGCCACCATTGATATTT GTCACTCCTTCTGGACAATTTCAAGGGGGTTTTGGTGATTGGAATAATTCTGCTGCCAAA TCATTTTTCGCTTTCAGCAGCAAGGATGCTCGTGGAGGCAAGGCTGATACATTTAGTGAT CAGAATACTGGTACTGGCAAGGCTGCCACTTTTGGTGATCAGGATGCTTTTGGCAGCCAG AATGTTTTTGCTAGTGATCACAGTACTGGTACTGGCAAGGCTGCCACTTTTGGTGATCAG GATGCTTTTGGCAGCCAGAATGTCGCCACTGGTGTGCAGGATGCTGCGAAAGGCCAGACT GCAACAGATTGGACAGATGTGAGTGCCAATCCTAATGGCCCAATTGATGCCATTGCCATT TCAGCTTACAGGTCAACACAGCCTAATGTTATATCACTGGATGATGATGATGACGACGAC GATGATGAGCCTTATGCTGCTAACAAGACATCAGCATCTGGACGCAAGATCAAGAGGCCA TCCCACCTCAGCGGATACAATGTGAGTGATGCTTTGGTAAGTGACAGCTCCAACAGCATG AAGGTTAAGCGCCCCAAATCCTCTCACGGGAAAGCTGCTGCTGACAACGAGCATGCCTTG CTTCCACCTTCTGAGGATCCCAGGGAAATTGTGGAGGCAGTTCTCATGACCTTTGAGGCG TTGCGGCGTAGGCATCTCCAATTGGATGAGGCACAAGAGACTAGCAAGCGTGCAGATCTG AAGGCTAGTGCTATCTTGATGTCCAGTAATATCAGGGCTAACCCTGGGAAGAGGATAGGG GTTGTTCCTGGAGTTGAAATAGGGGACATTTTCTACTTCAGGATGGAGCTATGTATTATT GGGCTGCATGCTCCTAGCATGGCCGGAATTGACTATATGACTGCCAAGTTTGGTGACGAG GATGATTCTGTTGCAATATGTATTGTTGCTGCAGGTGGTTATGACAATAATGATGATGAT ACAGATGTACTGGTTTACAGTGGTTCAGGAGGTAATAGCAAGAACAGTGAGGAGAAGCAT GACCAGAAGCTTGAGAGGGGCAACCTGGCTCTTGAGAGGAGCTTGTCCAGAAAAAATGTA ATCCGTGTGGTTCGGGGCTATAAGGATCCAGGTTGCTTGACTGGGAAGGTTTATATTTAT GATGGCCTCTATAGGATTCACGAGTCATGGAAGGAGAAAACGAAGAGTGGAATATTTTGT TTTAAGTACAAGCTGCTGCGAGAGCCAGGACAACCTGATGGGGTTGCAATCTGGAAGATG TCCCAGAAATGGGTACAAAATCCACTGACTAGAGGCAGTGTTTTAAATCCTGATCTATCA TCTGGTGCAGAAAATCTTCCAGTGTGTCTTGTTAATGACATTGACAGTGATGAAGTGCCA CACCATTTCACATATACCACTCAGGTCGAACACTTGAAACCACTCAGTTCTGTGAAGCCT TTACAGGGTTGCAGATGCCTTAGTGTTTGTCTGCCTGGTGATGCCAACTGCTGCTGTGCA CAGCGTAATGGAGGCAGCTTACCTTACAGCTCATCAGGACTGCTTGTATGCCGCAAGACT ATGGTTTATGAATGTGGTGAATCCTGTCGGTGTTCTTTCAATTGTCGTAACAGAGTGACC CAGAAAGGAGTTAGGATCCACTTTGAGGTCTTTAAGACGGGAAATCGAGGCTGGGGTCTT CGTTCGTGGGACGCTATACGGGCTGGTTCATTTATATGCGAGTATGTTGGTGAGGTTATT GATGATGCTAACATTAATCTGAATGATATTGAAGATGATTATATATTTCAGATGTCGTGT CCTGGTGAGAGGACATTAAAATGGAATTTTGGACCTGAATTGATAGGGGAGCAAAGCACA AATGTTTCTGCTGATACCTTTGAGACTCTACCCATTAAGATAAGTGCTAAAAGAATAGGA AACATATCACGTTTCATGAACCATAGTTGTGCTCCTAACGTATTTTGGCAGCCAGTTCAG TTTGACCATGAAGATGATCATCGCCCACATATCATGTTCTTTGCTTTGAAGCATATTCCT CCCATGACAGAGTTGACTTATGACTATGGTGACGTTGGAGCTGATCCTAGTGGTGTACGG TCTCCTAGAGCAAAGAACTGCCTTTGTGAATCCTCAAATTGTCGGGGATTCTTTATCTGA CCGTGGAAAATGCATATTCTATCTATCAACATTCAACCCTACCAGCTAGGTAAAAACTTC TAGTTTTTTTTCCAGTTCTGAGTTTCAGCCATGCTTCTAGTTACGGATGAAGTTCCTGGG TTTTCTTGTTTCGTCTAAGGGGTTGAGTTTTCATAGGCAACCAGTTTGTGTTGATACTAT TCCTGTAATCCTGTTTACTGTTGATGTTTTTTAATGTGAAACCATGCTGCTTGTTGATTT TGGTTTATCTGTCGATGTGTCTTCCATCCTGCACAAGTTTCATATCCATGCACTGTGTCT CATGATGTTGGCCAGAACTACCTCCGTTGTCTCAAGATTGGGAATTTGTTGTTGACAGAT TCTCGGCTTTGTCGACAACTCGACATCGAATTGTTTCTGATTCAACAGCTAATGTCGCAA GACAGCATCAATTTCGTCATCCAAAATTATCACTCCATGTGAAATTATTTTGTGACATTT TCAATCTAGCCCACTTATATTTGTGGAAACATGTAGTGGAACGATCTCTTACTAATGGCC TTGCATTTTACACAGATCCTTTTTGGTGGCACCTGAAGAAAAAGTAGGACTGTTCGAACA GCTTGCATCACTCTGTCGTTGTGGAACCATTATATTAATTAATGTCAATCTTTTAGATGA CCATTCAGCAACTAATGCACAAACGTTTCTTTTGTGGGGGAAGAATGTTGGTCTTGGAAG TTCAATTTTGTGTAGTTTGTAGACTTGTAGAGCATTTAGTGCTGCTAAACTTGTGCACCT TAAGTCTTTTGGCTGTAAAAGAGCCTCGAGGCTCCAGCTGAATTGGTTAGGCAGTCTAAG TAGCATTTCTTTGATCCTGAATTTGACTCCACGTGAGTCAATTTCAAGCTGGAGTTAAAA AAAACATTCTTATGTTCTATACTAAAGTACAGTTCTAAGGCT