Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043134_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:3:189961688:189965384:1 gene:Zm00001d043134 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exostosin family protein
Sequence

ATGGACTCCACCGGGAACTGGTATAAACCTGGACAAGTATATCTAGAAAAGGATGTCATC
CTTCCATATGTTCCAAACGTTGATCTTTGTGATCACAAGTGTGTATTAGAAACTCAATCC
AAAAGGAGTATATTGCTGTTCTTTCGAGGAAGACTGAAGAGAAATGCTGGAGGAAAGATC
CGCAGTAAACTTGTAGAGGAACTTAAAAGTGCAAAAGACATAGTTATAGAAGAAGGTTCT
ACTGGAGCTCAGGGAAAAGCAGCAGCTCAGGATGGCATGCGCAAGTCTTTCTTTTGCTTG
AGTCCGGCTGGGGATACCCCATCTTCTGCTCGCCTGTTTGATGCAATCGTTAGTGGTTGT
ATCCCAGTTATAATTAGTGATGAACTGGAGCTTCCATTTGAAGGAATACTTGACTATAGG
GAGATAGCATTGTTTGTTTCAGCAAGTGATGCTGTGCAACCGGGCTGGCTCTTGAAATAC
CTAAGAGGAATCAATGCCAAAAGAATAAGAGAAATTCAGTCTAATCTTGTGAAGTATTCA
AGACATTTTCTGTATTCAAGTCCTGCCCAACCTCTCGGACCAGAAGACCTTACATGGAGA
ATGATTGCTGGTAAGCTGGTAAATATCAAGTTGCAGATTCGGCGTTCTCAACGTTTGGTC
AAAGAGTCAAGGAGCATATGTACATGTGAATGTAGAGTTGGGAACACCACGAGAATGCTT
TGA

Peptide Sequence

PEP ID

Zm00001d043134_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:3:189961688:189965384:1 gene:Zm00001d043134 transcript:Zm00001d043134_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exostosin family protein
Sequence

MDSTGNWYKPGQVYLEKDVILPYVPNVDLCDHKCVLETQSKRSILLFFRGRLKRNAGGKI
RSKLVEELKSAKDIVIEEGSTGAQGKAAAQDGMRKSFFCLSPAGDTPSSARLFDAIVSGC
IPVIISDELELPFEGILDYREIALFVSASDAVQPGWLLKYLRGINAKRIREIQSNLVKYS
RHFLYSSPAQPLGPEDLTWRMIAGKLVNIKLQIRRSQRLVKESRSICTCECRVGNTTRML

Transcript Sequence

Transcript ID

Zm00001d043134_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:189961688:189965384:1 gene:Zm00001d043134 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exostosin family protein
Sequence

GTTTATTTTTCAGAAAATGTCTGTTTTAGGACACCCACATGGACAGTCTAGTGTTTATGA
CTTTATGTAGGAAAATTTGTTGATGAATTTAAATTTGACCCTTCCTGGCATTCAGTTATT
GAAGAGTATTAGATTTGTTTGACCAATTATATCTGAGATTATAGTGACAGATAACATTGC
TTGAGTTTGGTTCTATTGACAGTAGGAAAATCATTTAAGATCTTTATCTCTGTGTATGGA
AATTACTTTATTGTTATTCACTTCAATTTATTCCAAGAGGAACTTATCATCATTACATCT
TGATGTTAGGAAGCTTTGAAATGGGTCACAGATCAGCCTGCTTGGCAACGTTCAGAAGGC
AGGGATCATGTCATTCCTGTTCATCATCCATGGTCATTTAAGTCAGTCCGGAGATCTGTC
AAGAAAGCAATATGGCTTCTACCTGATATGGACTCCACCGGGAACTGGTATAAACCTGGA
CAAGTATATCTAGAAAAGGATGTCATCCTTCCATATGTTCCAAACGTTGATCTTTGTGAT
CACAAGTGTGTATTAGAAACTCAATCCAAAAGGAGTATATTGCTGTTCTTTCGAGGAAGA
CTGAAGAGAAATGCTGGAGGAAAGATCCGCAGTAAACTTGTAGAGGAACTTAAAAGTGCA
AAAGACATAGTTATAGAAGAAGGTTCTACTGGAGCTCAGGGAAAAGCAGCAGCTCAGGAT
GGCATGCGCAAGTCTTTCTTTTGCTTGAGTCCGGCTGGGGATACCCCATCTTCTGCTCGC
CTGTTTGATGCAATCGTTAGTGGTTGTATCCCAGTTATAATTAGTGATGAACTGGAGCTT
CCATTTGAAGGAATACTTGACTATAGGGAGATAGCATTGTTTGTTTCAGCAAGTGATGCT
GTGCAACCGGGCTGGCTCTTGAAATACCTAAGAGGAATCAATGCCAAAAGAATAAGAGAA
ATTCAGTCTAATCTTGTGAAGTATTCAAGACATTTTCTGTATTCAAGTCCTGCCCAACCT
CTCGGACCAGAAGACCTTACATGGAGAATGATTGCTGGTAAGCTGGTAAATATCAAGTTG
CAGATTCGGCGTTCTCAACGTTTGGTCAAAGAGTCAAGGAGCATATGTACATGTGAATGT
AGAGTTGGGAACACCACGAGAATGCTTTGACCAATATTTTCATTTGTGCCTTTAAACTTT
TGTAGCATAGCCGTTTTTTGTTACCAATGAGGCGAGCTTTGAGTTTGGCAAAATTTGCCG
ATGTATTTGTAAATGCAACTGAGCTGGAAAGAGTTGTGATACTGTACTAATCCCGATGCT
TGTGTTTGCTTTACTGCCCGTTAGGAACAAAAGGAATGTAAAACAGAGAAATGTAAAAAA
AAATCAAGAGCT