Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043126_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:3:189787475:189792491:-1 gene:Zm00001d043126 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ulp1 protease family C-terminal catalytic domain containing protein expressed
Sequence	ATGGCCCTTGAGGCAAAACAAGCTGCTCTGTGTTTCAAGGAAGTTTTGAGGTTATCCATT AGAAAAAGCTATAGATTTGTTTCAGAACACCCTATCCTTTTCGGTTTGGGTGTTTTTCTC TATCTATTCTACAGATCTTCACCAAGGCTCTTTGTGTTCCTGCTTTCTTCTTCACCTGTA AATATATGCACTGCTCTTCTTCTTGGAATCCTACTGAGTTATGGAGAAGTTAATCTTCCT GAGGCCAGTAAAGATCACAGGGACACTACAGAAGTTTCAACTTCCATGGTTGGAAATTCG TCCAGTGATGTCCACTTTGAAGCAAATCAGAGACCTTCTGTACTTGAATTTAGGGAGAAT GCATCAAACTTCAAAGAGAGAGAAACCAAACAGAAAGTTTCCTTCAGGGAGAGGGCTAGC GAGCATGTTGACCTTGATGATTATATCCCTCTTCTGAAGAGAGCTGGTGAAGAAGATGAG AGAGGTGATCGGGGTAACATATCTAGAACACTTACACCATTTCCTTCTATGGTCAATATT CGCCAAGAGTCTGTGATAGGGGAGGACTTGACCTTCACCAAGAAAAGACAATCGGAAGGT TCTTTTTTCATGCAGGATAGGGCCGACTGTCAGACTAGCCTATTTGATGAGGCCTGTCTG TGTGGTCTGAATGACAAAGATATACCTTTTGGTTTGTTTTCTTCTAGTGAGAATGTTAAT AAGAATGATGAGATGGAGGAAAAATTTAATCAACAGAGAGTATTTGCAGATTCAACAGCT ACCAAAGAGAGAGATAGTTCTGAAGCGATGCCAACCGAAGAGCTTGCTGGAACTAGCAAA CAAGCTGCTTCTGTCCCTATTGACCAATGGGAAAACAATGGCAGACTTAATGTTGATACT AGCAATGTTTTTGAGGACAACTTGCTTGATTCCTCTCTTGGCTCACCATGGGCAAGAGTT AGCAGTCATGATGGTTCATCTGGTTTTGATTCTGATCAGGCTGAGAGTTCTCCTGATGCT TCCATGACTGACATTGCTCCCGTTCTTGATGAGATTGATCCACTTTTGCGTGCTGATTCC AATCACCCCGATCCTGTTCCTAATGATGATTCAGACACAGATTCTCATGTCTCAGAGGAT CATCAAATTGACGATGATAGTAATGATGAGGGTGATGACATTGATGCTAAAGATAATGTG GAGGGGGAGAAGGAAAATGATGGGAAGGAAGCTGCATTTCTTTGGACAGCAGATGATGAA AAGAATCTGATGGATCTTGGATATTCTGAGATAGAAAGGAACCGCAGGTTGGAAATTTTG ATGGCTAGACGAAGATCCTGGAAGAACATGGCATTTGAAATCGATAACAACTTGATAGAT GTTCATAGTTCTGGCTCTGGTACAAGTTTAGATGATTTGTCACGCTTCCGTGCACAGGTA CCTCCTATTGCAGTGCCCAGGAGGAACCCTTTTGACCTTCCATATGATTCTGAAGAAGCA GCAATTCCTGGCTCAGCTCCTTCAATACTGCATGCACGGAAGAACCCGTTTGACCTTCCC CTTGAACAGTCAAATGACAGTGTTGTTGTCCATGCACATGATATTTTAAACTCTGGAGAA CCTGCGACTTCTCGTCGTGACATGATCTTTAGAAGGCATGAAAGCTTCAACTTTGGAAGG ATGGATGTGATCCAGGAGAAGCGTTTTTCTAGACTCAAGCCATATTTTGTTCCTGAAACT GTGGAATGGAATGCAAGCAATTTCGAAAGACAGTTCAATGATAAGTCTGAGTCTAAGATG AGCTCTGTTACTAAATCTGATATTGCTTCTTCAGTTGCTGATCAGGAGGATCATAAGGAC CAAGATGAAAAGGACCTTGCAGATGTTGGAAGTGAATGCTCAGATGGTATCAACTCCATA GATGTTGAACTAGACCACAGTGACATCGATGACCGTGAGATTGCTCTACAGCAATTTGTC TTTGAAAGAGCACAAGAAAGGGAAGCACATCTTGTTTCAACTAAAGGAAAAGGACGTGAA GAAGATTATGCACCAGAATCAGCTGGGAGTTCAACGATGCCATTTCATGCAGTCCCTGAC CTGCTTAGCTGGGAAGATGGAGATGGTGACAACAGCCTTGGTGCTAAACCTTCTTTCCAG CTTAACACAGAAGTTAAATGCTCAGAATGGGTTTCTTCTTCCAGGCCACCCGTGGAGGGA GAATCTGATTCTGGGGATCTTCCAGAGTACCTTGATACTGAAGTTGCATCAAGCTCAAAC ACAGCCATACTTGGTGCAAACAATGCAGCTGAGAAAGGTGGAAATGTTGATCGCATGTCA TATTCAAACGATGAAATGCCTTTAGATAACCTGATTCATCGGTCTATGGAGCTGCCTTCT GAATTTTTCACTGAAACATTGCCAGTCATATCTAGGGACCTACACCCTATCCCAGAGGAG AGAGTTGTTGAGAACTTCAACGTGCAAGAAAATCATGAAGCAGCAATTTTTACTGATTCA GTTGTTGCCTTGACTGGGTTGCATGTAATTGAAGAGCACTTTGATGATGGAACTGACAGA ACTCTAAGCTCTGAAGTTGTTTCCTCATATCCTCGAGCTAATGGTGTCACCCAATCTCCA TCAAGTGAGCATGCAGAAATCTTGAATCCATTTGTTTTGATGGCTGCTGAACATAATAAG GTGGATATAAGCGACATGCATGGTGAAGCAACTGCCGGATATCTACTTGATTCTGATGAT GAGGCTGGTAAAATCTATCCTGAGCCTATGGAAGGCAGTGGAATTGATGAAAGTTTCCTG TCTGAATTGGATGTGGTGGGAGACTTTGGAGTTGAACCGATGAGACTGGACCAGCAGGTG ACAGATCAGGCTTCTCATGGTGATAACACTACCGATAGTGTTACTGCAGATTCTGTTATT AGTCCTCAGACATCTGACGATGTCTCCTTGATCATGTCGGAAGTTGGTGCTGAAGAATCC AGGGAGCAGTCTCCATTGGTTGATGACCTAAATGGCTCCGAATTATATTAA

Peptide Sequence

PEP ID	Zm00001d043126_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:3:189787475:189792491:-1 gene:Zm00001d043126 transcript:Zm00001d043126_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ulp1 protease family C-terminal catalytic domain containing protein expressed
Sequence	MALEAKQAALCFKEVLRLSIRKSYRFVSEHPILFGLGVFLYLFYRSSPRLFVFLLSSSPV NICTALLLGILLSYGEVNLPEASKDHRDTTEVSTSMVGNSSSDVHFEANQRPSVLEFREN ASNFKERETKQKVSFRERASEHVDLDDYIPLLKRAGEEDERGDRGNISRTLTPFPSMVNI RQESVIGEDLTFTKKRQSEGSFFMQDRADCQTSLFDEACLCGLNDKDIPFGLFSSSENVN KNDEMEEKFNQQRVFADSTATKERDSSEAMPTEELAGTSKQAASVPIDQWENNGRLNVDT SNVFEDNLLDSSLGSPWARVSSHDGSSGFDSDQAESSPDASMTDIAPVLDEIDPLLRADS NHPDPVPNDDSDTDSHVSEDHQIDDDSNDEGDDIDAKDNVEGEKENDGKEAAFLWTADDE KNLMDLGYSEIERNRRLEILMARRRSWKNMAFEIDNNLIDVHSSGSGTSLDDLSRFRAQV PPIAVPRRNPFDLPYDSEEAAIPGSAPSILHARKNPFDLPLEQSNDSVVVHAHDILNSGE PATSRRDMIFRRHESFNFGRMDVIQEKRFSRLKPYFVPETVEWNASNFERQFNDKSESKM SSVTKSDIASSVADQEDHKDQDEKDLADVGSECSDGINSIDVELDHSDIDDREIALQQFV FERAQEREAHLVSTKGKGREEDYAPESAGSSTMPFHAVPDLLSWEDGDGDNSLGAKPSFQ LNTEVKCSEWVSSSRPPVEGESDSGDLPEYLDTEVASSSNTAILGANNAAEKGGNVDRMS YSNDEMPLDNLIHRSMELPSEFFTETLPVISRDLHPIPEERVVENFNVQENHEAAIFTDS VVALTGLHVIEEHFDDGTDRTLSSEVVSSYPRANGVTQSPSSEHAEILNPFVLMAAEHNK VDISDMHGEATAGYLLDSDDEAGKIYPEPMEGSGIDESFLSELDVVGDFGVEPMRLDQQV TDQASHGDNTTDSVTADSVISPQTSDDVSLIMSEVGAEESREQSPLVDDLNGSELY

Transcript Sequence

Transcript ID	Zm00001d043126_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:189787475:189792491:-1 gene:Zm00001d043126 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ulp1 protease family C-terminal catalytic domain containing protein expressed
Sequence	GGACACCTACTTGCATCGTTTCCAAACTAAAAAAAAGTAACCGTCCCCGAAGCCCAAAGC CAAAAAAAAAACCTCCTGCAGCCTGCTCGAAACCCTCCTTCCTCCTCCTGAATTCGTCAA CCGGTCTCCCAAATCGGAGCGGCAATCGGATTGTTGGGTACTTGGGTCTCGAGACTGAGC TGTGCTCCAGTCCGTGAGCTATTCGTTGATTTTTCCAGCGTGAAGGCGCCGATTTTTGGG CCGTTGGCTGTGGTGGCGGGTTCGGCGGCTCTGGATCCGGCTGTCTTCCGGCGATAGATC GGGCTATTGGAGCAGAACAATACTTCGGATTCTTGAGGTGTCCGTAGCTGCACTCGCGAT GACCTTTTTTTAGGAAGCCGGTTGAATTCGTAGACCTGAAGATTTATTAGCTGGCCCACG CCATTTTCGGCAATAAAATAGTCGGCTGTTTCATAGCAATTTCAGAGTCCTTCTCAATCT TCTCCTGCCGCTGCTCCTTCGAGTTTTTTGCAGGCCTCGCTCTCAGCTGCTGGGCTACTG CTTAGTTTCTTCAAAGGTTTGTGTTGGAGGATAAGAGGGTTACATGCAATGGCCCTTGAG GCAAAACAAGCTGCTCTGTGTTTCAAGGAAGTTTTGAGGTTATCCATTAGAAAAAGCTAT AGATTTGTTTCAGAACACCCTATCCTTTTCGGTTTGGGTGTTTTTCTCTATCTATTCTAC AGATCTTCACCAAGGCTCTTTGTGTTCCTGCTTTCTTCTTCACCTGTAAATATATGCACT GCTCTTCTTCTTGGAATCCTACTGAGTTATGGAGAAGTTAATCTTCCTGAGGCCAGTAAA GATCACAGGGACACTACAGAAGTTTCAACTTCCATGGTTGGAAATTCGTCCAGTGATGTC CACTTTGAAGCAAATCAGAGACCTTCTGTACTTGAATTTAGGGAGAATGCATCAAACTTC AAAGAGAGAGAAACCAAACAGAAAGTTTCCTTCAGGGAGAGGGCTAGCGAGCATGTTGAC CTTGATGATTATATCCCTCTTCTGAAGAGAGCTGGTGAAGAAGATGAGAGAGGTGATCGG GGTAACATATCTAGAACACTTACACCATTTCCTTCTATGGTCAATATTCGCCAAGAGTCT GTGATAGGGGAGGACTTGACCTTCACCAAGAAAAGACAATCGGAAGGTTCTTTTTTCATG CAGGATAGGGCCGACTGTCAGACTAGCCTATTTGATGAGGCCTGTCTGTGTGGTCTGAAT GACAAAGATATACCTTTTGGTTTGTTTTCTTCTAGTGAGAATGTTAATAAGAATGATGAG ATGGAGGAAAAATTTAATCAACAGAGAGTATTTGCAGATTCAACAGCTACCAAAGAGAGA GATAGTTCTGAAGCGATGCCAACCGAAGAGCTTGCTGGAACTAGCAAACAAGCTGCTTCT GTCCCTATTGACCAATGGGAAAACAATGGCAGACTTAATGTTGATACTAGCAATGTTTTT GAGGACAACTTGCTTGATTCCTCTCTTGGCTCACCATGGGCAAGAGTTAGCAGTCATGAT GGTTCATCTGGTTTTGATTCTGATCAGGCTGAGAGTTCTCCTGATGCTTCCATGACTGAC ATTGCTCCCGTTCTTGATGAGATTGATCCACTTTTGCGTGCTGATTCCAATCACCCCGAT CCTGTTCCTAATGATGATTCAGACACAGATTCTCATGTCTCAGAGGATCATCAAATTGAC GATGATAGTAATGATGAGGGTGATGACATTGATGCTAAAGATAATGTGGAGGGGGAGAAG GAAAATGATGGGAAGGAAGCTGCATTTCTTTGGACAGCAGATGATGAAAAGAATCTGATG GATCTTGGATATTCTGAGATAGAAAGGAACCGCAGGTTGGAAATTTTGATGGCTAGACGA AGATCCTGGAAGAACATGGCATTTGAAATCGATAACAACTTGATAGATGTTCATAGTTCT GGCTCTGGTACAAGTTTAGATGATTTGTCACGCTTCCGTGCACAGGTACCTCCTATTGCA GTGCCCAGGAGGAACCCTTTTGACCTTCCATATGATTCTGAAGAAGCAGCAATTCCTGGC TCAGCTCCTTCAATACTGCATGCACGGAAGAACCCGTTTGACCTTCCCCTTGAACAGTCA AATGACAGTGTTGTTGTCCATGCACATGATATTTTAAACTCTGGAGAACCTGCGACTTCT CGTCGTGACATGATCTTTAGAAGGCATGAAAGCTTCAACTTTGGAAGGATGGATGTGATC CAGGAGAAGCGTTTTTCTAGACTCAAGCCATATTTTGTTCCTGAAACTGTGGAATGGAAT GCAAGCAATTTCGAAAGACAGTTCAATGATAAGTCTGAGTCTAAGATGAGCTCTGTTACT AAATCTGATATTGCTTCTTCAGTTGCTGATCAGGAGGATCATAAGGACCAAGATGAAAAG GACCTTGCAGATGTTGGAAGTGAATGCTCAGATGGTATCAACTCCATAGATGTTGAACTA GACCACAGTGACATCGATGACCGTGAGATTGCTCTACAGCAATTTGTCTTTGAAAGAGCA CAAGAAAGGGAAGCACATCTTGTTTCAACTAAAGGAAAAGGACGTGAAGAAGATTATGCA CCAGAATCAGCTGGGAGTTCAACGATGCCATTTCATGCAGTCCCTGACCTGCTTAGCTGG GAAGATGGAGATGGTGACAACAGCCTTGGTGCTAAACCTTCTTTCCAGCTTAACACAGAA GTTAAATGCTCAGAATGGGTTTCTTCTTCCAGGCCACCCGTGGAGGGAGAATCTGATTCT GGGGATCTTCCAGAGTACCTTGATACTGAAGTTGCATCAAGCTCAAACACAGCCATACTT GGTGCAAACAATGCAGCTGAGAAAGGTGGAAATGTTGATCGCATGTCATATTCAAACGAT GAAATGCCTTTAGATAACCTGATTCATCGGTCTATGGAGCTGCCTTCTGAATTTTTCACT GAAACATTGCCAGTCATATCTAGGGACCTACACCCTATCCCAGAGGAGAGAGTTGTTGAG AACTTCAACGTGCAAGAAAATCATGAAGCAGCAATTTTTACTGATTCAGTTGTTGCCTTG ACTGGGTTGCATGTAATTGAAGAGCACTTTGATGATGGAACTGACAGAACTCTAAGCTCT GAAGTTGTTTCCTCATATCCTCGAGCTAATGGTGTCACCCAATCTCCATCAAGTGAGCAT GCAGAAATCTTGAATCCATTTGTTTTGATGGCTGCTGAACATAATAAGGTGGATATAAGC GACATGCATGGTGAAGCAACTGCCGGATATCTACTTGATTCTGATGATGAGGCTGGTAAA ATCTATCCTGAGCCTATGGAAGGCAGTGGAATTGATGAAAGTTTCCTGTCTGAATTGGAT GTGGTGGGAGACTTTGGAGTTGAACCGATGAGACTGGACCAGCAGGTGACAGATCAGGCT TCTCATGGTGATAACACTACCGATAGTGTTACTGCAGATTCTGTTATTAGTCCTCAGACA TCTGACGATGTCTCCTTGATCATGTCGGAAGTTGGTGCTGAAGAATCCAGGGAGCAGTCT CCATTGGTTGATGACCTAAATGGCTCCGAATTATATTAAGAAGAAAAAAATGTTTGGAAT CATAAACACACACAAAAACATTCACACAGCAAACTCAGATTACATGCACACCTTGACTAA GTTTAGAACAGTAAAAAAGGAACTCGGACTAGACCTCTGATCTCCATTTGATATGCTGTA TTGGTTTAATCACAAATACATGATCTTCATATGACTCCC