Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043107_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:189323000:189325260:-1 gene:Zm00001d043107 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic/mitochondrial
Sequence	ATGCAACTGCTCAAACCGAAGGAAGCCGCCACACTCCCGCGCGAGGCCCTCGAGGCCCAC ATCGTCTCGCTGGTCCGCCGATGCCCGGGCCTCCTCGCGCTCCGCAGCGCGCACGCGCAC CTCACGCGGCTCCGCCTCCCGCGCCTCACCGCCGCCTTCGCGCTCTCGAAGCTCCTCGCC TCCTGCGTCTCGGCGCCCGCACCAGCCGCAGCCCAAGCCGCGGCGTCCTCCTACGCCCGC AACCTGTTCGACCAAATCCCCGACCCGACCGCCTTCTGCTACAACTCCCTCATCCGCGCG CTCCCCGCCGCGGGCTCCGCTCCCGCCCTGGCCGTCTACCGCCGCATGCTGCGGGCGGGG TCCCCGCGTCCCAACAGCTTCACGCTCGCGTTCGCGCTCAAGGCCTGCGCGGCCGTGCCA GCTCCTGGCGAGGGACGGCAGCTGCACGCGCAGGCGCTCCGCCAGGGGCTAGCGACTAGC GCCTACGTGCAGACCGGGCTGCTCAACCTCTACGCCAAGTGCGAGCAGGTTGCGCTTGCG AGGACTGTGTTTGATGGCATGGCCGGGGACAAGAATCTTGTCGCTTGGAGCGCGATGGTC AGTGGGTACTCGAGGGTGGGGATGGTGAATGAAGCGCTGGGGCTGTTCCGGGAGATGCAG GCGGTGGGTGTGGAGCCGGATGAGGTCACCATGGTCAGTGTGATATCCGCGTGCGCCAAG GCAGGGGCACTTGATCTGGGGAAGTGGGTGCATGCTTATATCGATAGGAAAGGTATCACC GTCGATCTAGAGCTGAGCACCGCTTTGATTGATATGTATGCTAAGTGTGGGTTGATAGAG CGGGCGAGAGGAGTGTTTGATGCGATGGTGGAGAAGGATACCAAGGCATGGAGCGCAATG ATAGTTGGATTTGCAATTCATGGGCTTGTAGAGGATGCATTGGGACTTTTCTCAAGAATG CTAGAGCTCAAGGTGAGGCCTAACAATGTCACCTTTATCGGTGTGCTGTCCGCCTGTGCT CATAGTGGGTTAGTGGAAGATGGACGGCGGTATTGGTCCATTATGCAAAATTTGGGAATT AAACCTTCAATGGAGAATTATGGCTGCATGGTTGATCTCCTGTGTCGATCTGGCCTTCTG GATGATGCTTACTCCTTTGTTATTGGCATGCCTGTCTCACCGAATTCAGTAATCTGGAGG ACACTTCTCGTGGCTTGTAAAAGCTCGAACAGGATTGACATAGCAGAATCAGCAACAAAG AGGCTCCTTGAGTTAGAACCTCACAATCCAGAGAACTACGTTCTGCTCTCCAACTTGTAC GCATCCAACTCCCAGTGGGACAGAGTGAGCTATCTGAGGAGAAAGATGAAAGGCAAGAAT GTTACTGCTATTGCTGGACGTAGTTCGATTGAAATAAACGGCCACCTGCATGAGTTTGTG GTGAGTGATGATTCACACCCTGAAATCAGGGAGATAAGGCTGGTTCTCAGAGAGATGGCG GATCGAGTGCGACGAGCTGGCCACAAACCTTGGACTGCAGCCGTTCTGCATGACGTCGGT GAAGAGGAAAAGGAAGCTGCGCTTTGTCAACACAGTGAAAGGCTAGCCATCGCATATGGG TTGCTAAAGACAAGAGCCCCTCATGTCATTCGGGTGGTGAAGAACTTGAGGTTTTGCCTT GATTGTCATGAAGTGGCCAAAATAATAAGCAAGGCATACAACCGAGAAATCGTCGTTAGG GATCGTGTTCGTTTCCACAAATTTATGGGAGGAAGTTGTTCCTGTAAGGACTTTTGGTGA

Peptide Sequence

PEP ID	Zm00001d043107_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:189323000:189325260:-1 gene:Zm00001d043107 transcript:Zm00001d043107_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic/mitochondrial
Sequence	MQLLKPKEAATLPREALEAHIVSLVRRCPGLLALRSAHAHLTRLRLPRLTAAFALSKLLA SCVSAPAPAAAQAAASSYARNLFDQIPDPTAFCYNSLIRALPAAGSAPALAVYRRMLRAG SPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALA RTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAK AGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAM IVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNLGI KPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATK RLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGHLHEFV VSDDSHPEIREIRLVLREMADRVRRAGHKPWTAAVLHDVGEEEKEAALCQHSERLAIAYG LLKTRAPHVIRVVKNLRFCLDCHEVAKIISKAYNREIVVRDRVRFHKFMGGSCSCKDFW

Transcript Sequence

Transcript ID	Zm00001d043107_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:189323000:189325260:-1 gene:Zm00001d043107 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic/mitochondrial
Sequence	GTCCCTGCACACGAACAGGAACCACGCCGCTGCTACGTCCCGAGCGGCCGAGCCCCGCAG AGAAAGAACGCCTCGCATGCAACTGCTCAAACCGAAGGAAGCCGCCACACTCCCGCGCGA GGCCCTCGAGGCCCACATCGTCTCGCTGGTCCGCCGATGCCCGGGCCTCCTCGCGCTCCG CAGCGCGCACGCGCACCTCACGCGGCTCCGCCTCCCGCGCCTCACCGCCGCCTTCGCGCT CTCGAAGCTCCTCGCCTCCTGCGTCTCGGCGCCCGCACCAGCCGCAGCCCAAGCCGCGGC GTCCTCCTACGCCCGCAACCTGTTCGACCAAATCCCCGACCCGACCGCCTTCTGCTACAA CTCCCTCATCCGCGCGCTCCCCGCCGCGGGCTCCGCTCCCGCCCTGGCCGTCTACCGCCG CATGCTGCGGGCGGGGTCCCCGCGTCCCAACAGCTTCACGCTCGCGTTCGCGCTCAAGGC CTGCGCGGCCGTGCCAGCTCCTGGCGAGGGACGGCAGCTGCACGCGCAGGCGCTCCGCCA GGGGCTAGCGACTAGCGCCTACGTGCAGACCGGGCTGCTCAACCTCTACGCCAAGTGCGA GCAGGTTGCGCTTGCGAGGACTGTGTTTGATGGCATGGCCGGGGACAAGAATCTTGTCGC TTGGAGCGCGATGGTCAGTGGGTACTCGAGGGTGGGGATGGTGAATGAAGCGCTGGGGCT GTTCCGGGAGATGCAGGCGGTGGGTGTGGAGCCGGATGAGGTCACCATGGTCAGTGTGAT ATCCGCGTGCGCCAAGGCAGGGGCACTTGATCTGGGGAAGTGGGTGCATGCTTATATCGA TAGGAAAGGTATCACCGTCGATCTAGAGCTGAGCACCGCTTTGATTGATATGTATGCTAA GTGTGGGTTGATAGAGCGGGCGAGAGGAGTGTTTGATGCGATGGTGGAGAAGGATACCAA GGCATGGAGCGCAATGATAGTTGGATTTGCAATTCATGGGCTTGTAGAGGATGCATTGGG ACTTTTCTCAAGAATGCTAGAGCTCAAGGTGAGGCCTAACAATGTCACCTTTATCGGTGT GCTGTCCGCCTGTGCTCATAGTGGGTTAGTGGAAGATGGACGGCGGTATTGGTCCATTAT GCAAAATTTGGGAATTAAACCTTCAATGGAGAATTATGGCTGCATGGTTGATCTCCTGTG TCGATCTGGCCTTCTGGATGATGCTTACTCCTTTGTTATTGGCATGCCTGTCTCACCGAA TTCAGTAATCTGGAGGACACTTCTCGTGGCTTGTAAAAGCTCGAACAGGATTGACATAGC AGAATCAGCAACAAAGAGGCTCCTTGAGTTAGAACCTCACAATCCAGAGAACTACGTTCT GCTCTCCAACTTGTACGCATCCAACTCCCAGTGGGACAGAGTGAGCTATCTGAGGAGAAA GATGAAAGGCAAGAATGTTACTGCTATTGCTGGACGTAGTTCGATTGAAATAAACGGCCA CCTGCATGAGTTTGTGGTGAGTGATGATTCACACCCTGAAATCAGGGAGATAAGGCTGGT TCTCAGAGAGATGGCGGATCGAGTGCGACGAGCTGGCCACAAACCTTGGACTGCAGCCGT TCTGCATGACGTCGGTGAAGAGGAAAAGGAAGCTGCGCTTTGTCAACACAGTGAAAGGCT AGCCATCGCATATGGGTTGCTAAAGACAAGAGCCCCTCATGTCATTCGGGTGGTGAAGAA CTTGAGGTTTTGCCTTGATTGTCATGAAGTGGCCAAAATAATAAGCAAGGCATACAACCG AGAAATCGTCGTTAGGGATCGTGTTCGTTTCCACAAATTTATGGGAGGAAGTTGTTCCTG TAAGGACTTTTGGTGATCTTTTTTTCTTTTCTTATTAATATAATAGCAAACTAGGTGAGT GCCCGTGCGTTGCAACGGCAACATATAATATC