Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043093_T099
CDS Infomation

cds chromosome:B73_RefGen_v4:3:189115257:189122704:1 gene:Zm00001d043093 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MOR1
Sequence

ATGAGTTTGCCATCAAAAGCTGGTTTAAAGAACAATAAACATGGTCCTAACGATCGTGGT
TCTAATGTGGGCAAACCTGTGTCCCAAAGAGGACTTCCACAGAGAGCATCTGTTACTATG
GTTTCTACTCAAGATTCTTCTCAATCCCAGGCATTATTTAACATAAAGGACTCAAACAAG
GAAGAGCGGGAGAGGCGTGTTTTGGTTAGAAAATTCAAATTCGAAGAACCTCGTCGAGAG
CAGATTGATGAACTAAAGATTGATTTGTTTAAGCATTTCCGAGAAGATGTAAGCTTGCGA
TTATGGAACTCAGATTTTAAGAGGCAAATAGATGGTATTGAATTGCTACAAAAGGCACTT
CTTTCGAGTGGGAAAGAAGCGATTGAACTTCTTGACATACTATTAAGGTGGATTGTCTTA
CGCTTTTGTGAATCTAACACAACATGTTTGTTGAAGGTTCTTGACTTTCTACCTGAGCTT
TTTGATATTTTAAAAGACCAGTCTTACATGTTGACAGAAGCTGAAGCTGCAATTTTTCTT
CCTTGCCTCATAGAGAAGTCTGGTCATAACATTGAAAAAGTCAGGGAAAAAATGGGGGAT
CTGATAAAGCAAATGGTCAACATTTATTCTCTTCCCAAATTACTTCCCTATATTCTTGAG
GGGCTCCGCTCAAAGAATAACCGGACAAGGATAGAATGTGTTGATATTATTGGATACTTC
ATTGACCATCATGGGACTGAGGTTGGTGGGTTGATGAAAAACTTGCCATTTGTTGCAGCA
CTGACAGCAGAGCGTGATGGTGAGATTAGGAAAGCTGCCCTTAATACGCTTGCAACAGCC
TACAAGAGCCTTGGGGATGATGTATGGCGATATGTTGGAAAACTCTCAGATGCCCAAAGA
AGCATGCTCGATGATAGGTTTAAATGGAAGGCAAGAGAAATGGATAAAAGGAGAGAAGGA
AGGCCTGGTGACGCTCGAGCAGCTTTGAGGCGTTCGGTTAGGGAGAATGGGTCTGATATA
GCAGAACAAAGTGGAGAAGTAGTCTCCCGTTCAGTGACAGGATCAATGATCTCAAGGGAC
CTCGGATATGCAGATGCTCATATGGATAGGCACATGGTACCTAGGCAGATTCCAGCTGCA
ACTGGTCCTGCGGACTGGCATGAAGCTCTTGACATAGTTGCATTAGGTTTGCCTGAGCAG
TCCGTTGAAGGTATGAAAGTTATATGCCATGAGCTAACACAGGCAGCTGATCCTGAAAGC
ACGGTGCTTGAAGATCTTATTAAGGAAGCTGACAGATTAGTGTCATGCTTGGCTGTTATG
GTTCCAAAAACCTTCAATTTTAGCTTATCTGGGGCTTCTTCAAGGTCTTGCAAATATGTC
TTAAACACACTCATGCAGACATTTCAGATCAAACGTCTTGCTCATGCTGTGAAGGAGGGT
ACCCTTGACAACCTTATTACGGAGTTACTTCTTTGGCTCTTAGATGAAAGGGTTCCTCTT
ATGGATGATGGCAGCCAATTACTCAAAGCACTAAATGTTTTGATGCTTAAAATCCTGGAT
AATGCTGAGAGAACATCCTCGTTTGTTGTGCTGATTAATTTGCTGAGGCCTTTGGACCCT
TCAAGATGGCCATCGCCTACACCAATGGAGTCTCTTGCTGTAAAAAATCAGAAGTTTTCA
GACTTAGTTGTCAAATGTTTAATTAAGTTGACAAAGGTTCTTCAGAGTACAATATATGAA
GTTGACCTTGATCGAATTCTTCAGAGCATCCATATTTATTTACAAGAACTGGGAATGGAA
GAAATACGGAGAAGGGCTGGTGCTGATGATAAGCCATTAAGAATGGTCAAAACCGTCTTG
CATGAACTTGTGAAGCTTCGGGGAACGGCAATAAAGGGTCACCTTTCGATGGTTCCTATA
GATGCTGAACCTCAGCCAATAATTCTAGCATACATTGATCTTAATCTCCAGACCCTTGCT
GCTGCTAGAATGTTGACGCCATCGGGACCTATGGGTCAAACTCACTGGGGTGATGCTGCT
TCAAACAATCCAAATCCATCTACTCACTCAGCAGACGCGCAATTGAAGCAAGAGCTTGCT
GCTGTCTTCAAGAAAATCGGCGACAAGCAAACATGTACTATTGGCTTCTACGAACTGTAT
CGGATAACTCAGCTCTACCCAAAGGTTGATATATTTGCTCAGCTTCAGAATGCTAGTGAA
GCATTTAGAACCTATATCAGGGATGGGCTAGCTCAGGTGGAGAAGAATGCAGCAGCTGGA
AGAACGCCTTCTAGTCTTCCACTGTCCACGCCACCCCCAATAGCAGCAATACCTTCTCCA
AAATTGGCACCGTCCCCAGTTCACACAAAATCAATTGGTAGCAAAACAGATTATAACGAA
GATAATGCCAGTGGTGAGACACAACCTTTCAGAGGTCAAGGTGACGCCACTGACCAACAA
ACTGATAGATACCAGACCTCAGGTACATTGGATGCTCTTAGGGAAAGGATGAAAAGCATT
CAAGCTGCAGCTATAGGTCATTTTGACGGAGCTCAGGCTCGGCCGTTGGCAAGTATGAAC
GGAAGTAATATGCTGCATGGGGGAACACGATTGGACGGTGAGCCCCAGCAACAAAGTAAT
ATTCCACCCATGGATGAGCGAGCTCTCTCTGGGCTACAAGCACGAATGGAGAGGCTAAAG
AGCGGGTCTATGGAATCACTATAG

Peptide Sequence

PEP ID

Zm00001d043093_P099
PEP Infomation

pep chromosome:B73_RefGen_v4:3:189115257:189122704:1 gene:Zm00001d043093 transcript:Zm00001d043093_T099 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MOR1
Sequence

MSLPSKAGLKNNKHGPNDRGSNVGKPVSQRGLPQRASVTMVSTQDSSQSQALFNIKDSNK
EERERRVLVRKFKFEEPRREQIDELKIDLFKHFREDVSLRLWNSDFKRQIDGIELLQKAL
LSSGKEAIELLDILLRWIVLRFCESNTTCLLKVLDFLPELFDILKDQSYMLTEAEAAIFL
PCLIEKSGHNIEKVREKMGDLIKQMVNIYSLPKLLPYILEGLRSKNNRTRIECVDIIGYF
IDHHGTEVGGLMKNLPFVAALTAERDGEIRKAALNTLATAYKSLGDDVWRYVGKLSDAQR
SMLDDRFKWKAREMDKRREGRPGDARAALRRSVRENGSDIAEQSGEVVSRSVTGSMISRD
LGYADAHMDRHMVPRQIPAATGPADWHEALDIVALGLPEQSVEGMKVICHELTQAADPES
TVLEDLIKEADRLVSCLAVMVPKTFNFSLSGASSRSCKYVLNTLMQTFQIKRLAHAVKEG
TLDNLITELLLWLLDERVPLMDDGSQLLKALNVLMLKILDNAERTSSFVVLINLLRPLDP
SRWPSPTPMESLAVKNQKFSDLVVKCLIKLTKVLQSTIYEVDLDRILQSIHIYLQELGME
EIRRRAGADDKPLRMVKTVLHELVKLRGTAIKGHLSMVPIDAEPQPIILAYIDLNLQTLA
AARMLTPSGPMGQTHWGDAASNNPNPSTHSADAQLKQELAAVFKKIGDKQTCTIGFYELY
RITQLYPKVDIFAQLQNASEAFRTYIRDGLAQVEKNAAAGRTPSSLPLSTPPPIAAIPSP
KLAPSPVHTKSIGSKTDYNEDNASGETQPFRGQGDATDQQTDRYQTSGTLDALRERMKSI
QAAAIGHFDGAQARPLASMNGSNMLHGGTRLDGEPQQQSNIPPMDERALSGLQARMERLK
SGSMESL

Transcript Sequence

Transcript ID

Zm00001d043093_T099
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:189115257:189122704:1 gene:Zm00001d043093 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MOR1
Sequence

GGATTTTCTGAATCTGTTAAGGTGGTGTCAACAAGCATGAGTTTGCCATCAAAAGCTGGT
TTAAAGAACAATAAACATGGTCCTAACGATCGTGGTTCTAATGTGGGCAAACCTGTGTCC
CAAAGAGGACTTCCACAGAGAGCATCTGTTACTATGGTTTCTACTCAAGATTCTTCTCAA
TCCCAGGCATTATTTAACATAAAGGACTCAAACAAGGAAGAGCGGGAGAGGCGTGTTTTG
GTTAGAAAATTCAAATTCGAAGAACCTCGTCGAGAGCAGATTGATGAACTAAAGATTGAT
TTGTTTAAGCATTTCCGAGAAGATGTAAGCTTGCGATTATGGAACTCAGATTTTAAGAGG
CAAATAGATGGTATTGAATTGCTACAAAAGGCACTTCTTTCGAGTGGGAAAGAAGCGATT
GAACTTCTTGACATACTATTAAGGTGGATTGTCTTACGCTTTTGTGAATCTAACACAACA
TGTTTGTTGAAGGTTCTTGACTTTCTACCTGAGCTTTTTGATATTTTAAAAGACCAGTCT
TACATGTTGACAGAAGCTGAAGCTGCAATTTTTCTTCCTTGCCTCATAGAGAAGTCTGGT
CATAACATTGAAAAAGTCAGGGAAAAAATGGGGGATCTGATAAAGCAAATGGTCAACATT
TATTCTCTTCCCAAATTACTTCCCTATATTCTTGAGGGGCTCCGCTCAAAGAATAACCGG
ACAAGGATAGAATGTGTTGATATTATTGGATACTTCATTGACCATCATGGGACTGAGGTT
GGTGGGTTGATGAAAAACTTGCCATTTGTTGCAGCACTGACAGCAGAGCGTGATGGTGAG
ATTAGGAAAGCTGCCCTTAATACGCTTGCAACAGCCTACAAGAGCCTTGGGGATGATGTA
TGGCGATATGTTGGAAAACTCTCAGATGCCCAAAGAAGCATGCTCGATGATAGGTTTAAA
TGGAAGGCAAGAGAAATGGATAAAAGGAGAGAAGGAAGGCCTGGTGACGCTCGAGCAGCT
TTGAGGCGTTCGGTTAGGGAGAATGGGTCTGATATAGCAGAACAAAGTGGAGAAGTAGTC
TCCCGTTCAGTGACAGGATCAATGATCTCAAGGGACCTCGGATATGCAGATGCTCATATG
GATAGGCACATGGTACCTAGGCAGATTCCAGCTGCAACTGGTCCTGCGGACTGGCATGAA
GCTCTTGACATAGTTGCATTAGGTTTGCCTGAGCAGTCCGTTGAAGGTATGAAAGTTATA
TGCCATGAGCTAACACAGGCAGCTGATCCTGAAAGCACGGTGCTTGAAGATCTTATTAAG
GAAGCTGACAGATTAGTGTCATGCTTGGCTGTTATGGTTCCAAAAACCTTCAATTTTAGC
TTATCTGGGGCTTCTTCAAGGTCTTGCAAATATGTCTTAAACACACTCATGCAGACATTT
CAGATCAAACGTCTTGCTCATGCTGTGAAGGAGGGTACCCTTGACAACCTTATTACGGAG
TTACTTCTTTGGCTCTTAGATGAAAGGGTTCCTCTTATGGATGATGGCAGCCAATTACTC
AAAGCACTAAATGTTTTGATGCTTAAAATCCTGGATAATGCTGAGAGAACATCCTCGTTT
GTTGTGCTGATTAATTTGCTGAGGCCTTTGGACCCTTCAAGATGGCCATCGCCTACACCA
ATGGAGTCTCTTGCTGTAAAAAATCAGAAGTTTTCAGACTTAGTTGTCAAATGTTTAATT
AAGTTGACAAAGGTTCTTCAGAGTACAATATATGAAGTTGACCTTGATCGAATTCTTCAG
AGCATCCATATTTATTTACAAGAACTGGGAATGGAAGAAATACGGAGAAGGGCTGGTGCT
GATGATAAGCCATTAAGAATGGTCAAAACCGTCTTGCATGAACTTGTGAAGCTTCGGGGA
ACGGCAATAAAGGGTCACCTTTCGATGGTTCCTATAGATGCTGAACCTCAGCCAATAATT
CTAGCATACATTGATCTTAATCTCCAGACCCTTGCTGCTGCTAGAATGTTGACGCCATCG
GGACCTATGGGTCAAACTCACTGGGGTGATGCTGCTTCAAACAATCCAAATCCATCTACT
CACTCAGCAGACGCGCAATTGAAGCAAGAGCTTGCTGCTGTCTTCAAGAAAATCGGCGAC
AAGCAAACATGTACTATTGGCTTCTACGAACTGTATCGGATAACTCAGCTCTACCCAAAG
GTTGATATATTTGCTCAGCTTCAGAATGCTAGTGAAGCATTTAGAACCTATATCAGGGAT
GGGCTAGCTCAGGTGGAGAAGAATGCAGCAGCTGGAAGAACGCCTTCTAGTCTTCCACTG
TCCACGCCACCCCCAATAGCAGCAATACCTTCTCCAAAATTGGCACCGTCCCCAGTTCAC
ACAAAATCAATTGGTAGCAAAACAGATTATAACGAAGATAATGCCAGTGGTGAGACACAA
CCTTTCAGAGGTCAAGGTGACGCCACTGACCAACAAACTGATAGATACCAGACCTCAGGT
ACATTGGATGCTCTTAGGGAAAGGATGAAAAGCATTCAAGCTGCAGCTATAGGTCATTTT
GACGGAGCTCAGGCTCGGCCGTTGGCAAGTATGAACGGAAGTAATATGCTGCATGGGGGA
ACACGATTGGACGGTGAGCCCCAGCAACAAAGTAATATTCCACCCATGGATGAGCGAGCT
CTCTCTGGGCTACAAGCACGAATGGAGAGGCTAAAGAGCGGGTCTATGGAATCACTATAG
ATTGATAACAGTACTGAGAAATACCATCCGTTGTAATTCATTGTAAATTTGAGGCATAGT
GATGCTGTTTGTAGATAGGTATTTGAATGTCGGAAGAAGTACGTCTCACGGGGCCGACAT
TTCGTAACCCCTGTGCCAGGTCAATCCATTCTTGCGGAGCCTTTGATTGCAGTTTTAGAC
AAGAGCTAGCCAGATGTTTTCTTTGTAGCTACTCTCTGAAGGGCTAATTAGGGTTGACAA
ATTTCGCCGTACTGTATTAGTTTTCCTGTGGTGTACAGCAATAGACTTTTAAGTTCTAAA
TTAACTGAAAATGTTAGTTGTGAAATATATGTTTTTTATAGAATGTATATTCGTACGGCT
TAGTGGTCGGTGTGGAAAATTGTTAGTGTTGGAATGTCAAATGAAATGGTTAGACCAACT
TCCAGCCGTCCGTGTACGCGTCGATCGAAACTATTCATCCTTTCAGCAC