Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043058_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:187676643:187680474:1 gene:Zm00001d043058 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable LRR receptor-like serine/threonine-protein kinase IRK
Sequence

ATGGCCACCGCCGCCGCCGTCTGCCCTCTCCTGCTCCTCGCCGCGCTACTCCTCGCGGTG
TCCGCCACCACGAGCGCGCTCACCGACGACGTGCTCGCACTGGTGGTCTTCAAGATGGAC
ATCTCGGACCCGTCGGGCCGCCTCGCGACGTGGACCGAGGACGATGATCGTCCCTGCTCC
TGGCCGGCCGTTGGCTGCGACGCGCGCACGGGCCGCGTCACCTCGCTCTCTCTCCCGGCG
GCGTCGCTCTCGGGCCGCTTGCCGCACGCGCTGCTCCGCCTCGACGCGCTCCTCTCCCTC
GCACTCCCGCGCAACAACCTCTCCGGCCCCGTGCCCCCCAACCTCCTAACCGCGCTCCCG
CGGCTCCGCGCCCTCGACCTCTCCTCCAACCGCCTCGCCGCGCCCGTCCCCGCGCAGCTC
TTCGCCCAATGCCGTGCCGTCCGCGCCATCTCCCTCGCGCACAACCAGCTCTCGGGCTAC
ATCCCGCCCGCCGTCGCGTCCTGCGCATCGCTCGTGTCCCTCAACCTCTCGTCCAATCGC
CTCGCCGGTCCCATCCCGGACGGGCTCTGGTCGCTGCCTTCGCTCCGGTCCCTCGACCTC
TCCGGCAACGAGCTCTCCGGGAGTGTGCCCGGTGGATTCCCCCGGACCAGCTCGCTACGG
GAGGTGGATTTGAGCCGAAACCTCCTCGCCGGGGAGATACCGGCAGATGTTGGAGAGGCG
GCGCTGCTGAAGTCACTGGGTTTGGGGCATAACTTGTTCACTGGCAGCCTTCCGGACTCG
CTCCGGAGGCTGGCCGGTCTGCAGTTCCTCGGCGCCGGCGGCAATGCGCTTGCAGGGGAG
CTGCCAGCATGGATCGGGGAAATAAGGGCGCTGGAGCGCCTTGATTTATCGGGCAACCGA
TTTGCCGGCAACATTCCCTACACTATCGCGAACTGCAAGAACCTTGTGGAGATCGACCTA
AGCTGCAATGCGCTCACCGGCGATCTTCCCTGGTGGGTGTTCGGCCTACCGCTGCAGCGC
GTCTCGGTGGCAGGCAACCAGCTGAATGGGTGGGTGAAGGTGGCCGACGACGCAGCAATG
GCGCTTCGTGTGCTGGACCTGTCGTGCAACGCGTTCTCCGGCGAGATCCCGCTGCGGATC
ACTGCCTTCGCGGGTTTGCAGTCTCTTAACCTGTCCTCGAATTCCTTCTCGGGGCAGCTG
CCGGCCGGCATTGGTGGATTGAGGCTCCTCGAGGTTCTGGACGTGAGCGCTAACCGACTT
GAAGGAACCGTGCCGCCGGAGATCGGCGGTGCGGTGGCGCTCCGGGACCTGAGGATGGGA
AGGAATTCGCTTACGGGACGCATCCCGGCACAGATTGGGAACTGCAGCTCCCTCGTTGCA
CTGGATTTCTCACACAATAACCTGACGTGGCCGATTCCTAGCACCATGGGAAACCTGACC
AGCCTCCAAGTGGTCAATCTATCTCAGAACAAGCTGAACGGGACCCTACCAGTGGAGCTA
TCCAATCTGCCTAGCCTCCACATCTTTGACGTCTCCCACAACATGCTGACAGGGGATCTG
CCACACAGCCGCTTCTTCAACAACATCCCCGAGTCCTTCCTCGTGGACAATTCTGGTCTG
TGTAGCTCACGGAAGAATGATTCGTGCAGCGCAGTTATGCCAAAGCCTATTGTGCTCAAC
CCAAACTCCTCATCAAATCCCTCATGGCAGGCTACACCCAGTGCCCCTAGCAACATGCAT
CACAAGAAAATCATACTGAGTATCTCCACCCTCGTTGCCATTGCGGGCGGCGCGGCCATT
GCTATCGGAGTGATCACCATATCCGTGCTCAATCGCCGCGTCCGGGCCCGTGCGGCTGCC
CCACGCTCAGCACCTGCTACTGCATTGTCCGATGACTACCTCAGTCAGTCCCCAGAGAAT
GACGCTAGCTCCGGGAAGCTTGTCATGTTTGGCAAGGGCAGCCCTGAGTTCAGCGCCGGT
GGGCACGCGTTGTTGAACAAAGACTGTGAGCTTGGGCGTGGAGGCTTTGGGGCAGTCTAC
AAGACGGTGCTCAGAGACGGACAGCCGGTAGCCATCAAGAAGCTTACAGTCTCTAGCTTG
GTCAAGTCAAAGGATGACTTCGAGCGACAAGTGAAGACGCTCAGCAAGGTGCGGCACCAC
AATATCGTCGCGCTCAGAGGCTTCTACTGGACTTCGTCACTGCAGCTCCTCATCTATGAT
TACCTACCTGGAGGAAACCTGCACAAACACCTGCACGAGTGCAACGAAGACAGCTTACTT
TCCTGGATGGAGAGATTCGACATCATCCTCGGCATTGCCCGGGGCCTGACCTACCTGCAC
CAGCACGGCATCATCCACTACAATCTCAAGTCAAGCAACGTGCTGCTGGACAGCAACGGC
GAGCCAAAGGTGGGTGACTACGGCCTCGCCAAGCTGCTGCCGATGCTGGACCGGTACGTC
CTGAGCAGTAAGGTCCAGAGCGCGCTCGGGTACATGGCGCCAGAGTTTGCGTGCAAGACG
GTGAAGATCACCGAGAAATGCGACGTCTATGGCTTCGGGGTGCTTCTGCTGGAGGCCTTG
ACGGGCAGGAGGCCCGTGGAGTACTTGGAAGACGACGTGGTTGTCCTGTGTGACCTGGTC
AGAGGCGCGCTGGAGGAAGGCAGGCCAGAGGACTGCGTCGACCCTCGGCTGCGCGGCGAG
TTCCCCATGGACGAGGCCCTGCCGGTCATCAAGCTGGGCCTTGTGTGCACCTCTCAGGTG
CCGTCGAACCGGCCTGGCATGGGTGAGGTCGTGAGCATGCTCGAGCTGGTGAGGAATCCT
CGAGATATCGCCGAGGATGAGCTGGTTTGA

Peptide Sequence

PEP ID

Zm00001d043058_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:187676643:187680474:1 gene:Zm00001d043058 transcript:Zm00001d043058_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable LRR receptor-like serine/threonine-protein kinase IRK
Sequence

MATAAAVCPLLLLAALLLAVSATTSALTDDVLALVVFKMDISDPSGRLATWTEDDDRPCS
WPAVGCDARTGRVTSLSLPAASLSGRLPHALLRLDALLSLALPRNNLSGPVPPNLLTALP
RLRALDLSSNRLAAPVPAQLFAQCRAVRAISLAHNQLSGYIPPAVASCASLVSLNLSSNR
LAGPIPDGLWSLPSLRSLDLSGNELSGSVPGGFPRTSSLREVDLSRNLLAGEIPADVGEA
ALLKSLGLGHNLFTGSLPDSLRRLAGLQFLGAGGNALAGELPAWIGEIRALERLDLSGNR
FAGNIPYTIANCKNLVEIDLSCNALTGDLPWWVFGLPLQRVSVAGNQLNGWVKVADDAAM
ALRVLDLSCNAFSGEIPLRITAFAGLQSLNLSSNSFSGQLPAGIGGLRLLEVLDVSANRL
EGTVPPEIGGAVALRDLRMGRNSLTGRIPAQIGNCSSLVALDFSHNNLTWPIPSTMGNLT
SLQVVNLSQNKLNGTLPVELSNLPSLHIFDVSHNMLTGDLPHSRFFNNIPESFLVDNSGL
CSSRKNDSCSAVMPKPIVLNPNSSSNPSWQATPSAPSNMHHKKIILSISTLVAIAGGAAI
AIGVITISVLNRRVRARAAAPRSAPATALSDDYLSQSPENDASSGKLVMFGKGSPEFSAG
GHALLNKDCELGRGGFGAVYKTVLRDGQPVAIKKLTVSSLVKSKDDFERQVKTLSKVRHH
NIVALRGFYWTSSLQLLIYDYLPGGNLHKHLHECNEDSLLSWMERFDIILGIARGLTYLH
QHGIIHYNLKSSNVLLDSNGEPKVGDYGLAKLLPMLDRYVLSSKVQSALGYMAPEFACKT
VKITEKCDVYGFGVLLLEALTGRRPVEYLEDDVVVLCDLVRGALEEGRPEDCVDPRLRGE
FPMDEALPVIKLGLVCTSQVPSNRPGMGEVVSMLELVRNPRDIAEDELV

Transcript Sequence

Transcript ID

Zm00001d043058_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:187676643:187680474:1 gene:Zm00001d043058 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable LRR receptor-like serine/threonine-protein kinase IRK
Sequence

GCTTCTCCCCTCTCCCCACTGGTGACTGGCTGACTGCTCCACGCCGCGACCACGCCCACC
ACCGCGCTGCACTGGCCACTACTCCCCCTTCCCCGCACTGCACTGCACCAGAACTGCCCC
GCGCAAATGGAAAGAGCACCGCTGTGATCCCTCCACCCTCCTCGTCCCCCTAGCCGTGTC
GCGATGGCCACCGCCGCCGCCGTCTGCCCTCTCCTGCTCCTCGCCGCGCTACTCCTCGCG
GTGTCCGCCACCACGAGCGCGCTCACCGACGACGTGCTCGCACTGGTGGTCTTCAAGATG
GACATCTCGGACCCGTCGGGCCGCCTCGCGACGTGGACCGAGGACGATGATCGTCCCTGC
TCCTGGCCGGCCGTTGGCTGCGACGCGCGCACGGGCCGCGTCACCTCGCTCTCTCTCCCG
GCGGCGTCGCTCTCGGGCCGCTTGCCGCACGCGCTGCTCCGCCTCGACGCGCTCCTCTCC
CTCGCACTCCCGCGCAACAACCTCTCCGGCCCCGTGCCCCCCAACCTCCTAACCGCGCTC
CCGCGGCTCCGCGCCCTCGACCTCTCCTCCAACCGCCTCGCCGCGCCCGTCCCCGCGCAG
CTCTTCGCCCAATGCCGTGCCGTCCGCGCCATCTCCCTCGCGCACAACCAGCTCTCGGGC
TACATCCCGCCCGCCGTCGCGTCCTGCGCATCGCTCGTGTCCCTCAACCTCTCGTCCAAT
CGCCTCGCCGGTCCCATCCCGGACGGGCTCTGGTCGCTGCCTTCGCTCCGGTCCCTCGAC
CTCTCCGGCAACGAGCTCTCCGGGAGTGTGCCCGGTGGATTCCCCCGGACCAGCTCGCTA
CGGGAGGTGGATTTGAGCCGAAACCTCCTCGCCGGGGAGATACCGGCAGATGTTGGAGAG
GCGGCGCTGCTGAAGTCACTGGGTTTGGGGCATAACTTGTTCACTGGCAGCCTTCCGGAC
TCGCTCCGGAGGCTGGCCGGTCTGCAGTTCCTCGGCGCCGGCGGCAATGCGCTTGCAGGG
GAGCTGCCAGCATGGATCGGGGAAATAAGGGCGCTGGAGCGCCTTGATTTATCGGGCAAC
CGATTTGCCGGCAACATTCCCTACACTATCGCGAACTGCAAGAACCTTGTGGAGATCGAC
CTAAGCTGCAATGCGCTCACCGGCGATCTTCCCTGGTGGGTGTTCGGCCTACCGCTGCAG
CGCGTCTCGGTGGCAGGCAACCAGCTGAATGGGTGGGTGAAGGTGGCCGACGACGCAGCA
ATGGCGCTTCGTGTGCTGGACCTGTCGTGCAACGCGTTCTCCGGCGAGATCCCGCTGCGG
ATCACTGCCTTCGCGGGTTTGCAGTCTCTTAACCTGTCCTCGAATTCCTTCTCGGGGCAG
CTGCCGGCCGGCATTGGTGGATTGAGGCTCCTCGAGGTTCTGGACGTGAGCGCTAACCGA
CTTGAAGGAACCGTGCCGCCGGAGATCGGCGGTGCGGTGGCGCTCCGGGACCTGAGGATG
GGAAGGAATTCGCTTACGGGACGCATCCCGGCACAGATTGGGAACTGCAGCTCCCTCGTT
GCACTGGATTTCTCACACAATAACCTGACGTGGCCGATTCCTAGCACCATGGGAAACCTG
ACCAGCCTCCAAGTGGTCAATCTATCTCAGAACAAGCTGAACGGGACCCTACCAGTGGAG
CTATCCAATCTGCCTAGCCTCCACATCTTTGACGTCTCCCACAACATGCTGACAGGGGAT
CTGCCACACAGCCGCTTCTTCAACAACATCCCCGAGTCCTTCCTCGTGGACAATTCTGGT
CTGTGTAGCTCACGGAAGAATGATTCGTGCAGCGCAGTTATGCCAAAGCCTATTGTGCTC
AACCCAAACTCCTCATCAAATCCCTCATGGCAGGCTACACCCAGTGCCCCTAGCAACATG
CATCACAAGAAAATCATACTGAGTATCTCCACCCTCGTTGCCATTGCGGGCGGCGCGGCC
ATTGCTATCGGAGTGATCACCATATCCGTGCTCAATCGCCGCGTCCGGGCCCGTGCGGCT
GCCCCACGCTCAGCACCTGCTACTGCATTGTCCGATGACTACCTCAGTCAGTCCCCAGAG
AATGACGCTAGCTCCGGGAAGCTTGTCATGTTTGGCAAGGGCAGCCCTGAGTTCAGCGCC
GGTGGGCACGCGTTGTTGAACAAAGACTGTGAGCTTGGGCGTGGAGGCTTTGGGGCAGTC
TACAAGACGGTGCTCAGAGACGGACAGCCGGTAGCCATCAAGAAGCTTACAGTCTCTAGC
TTGGTCAAGTCAAAGGATGACTTCGAGCGACAAGTGAAGACGCTCAGCAAGGTGCGGCAC
CACAATATCGTCGCGCTCAGAGGCTTCTACTGGACTTCGTCACTGCAGCTCCTCATCTAT
GATTACCTACCTGGAGGAAACCTGCACAAACACCTGCACGAGTGCAACGAAGACAGCTTA
CTTTCCTGGATGGAGAGATTCGACATCATCCTCGGCATTGCCCGGGGCCTGACCTACCTG
CACCAGCACGGCATCATCCACTACAATCTCAAGTCAAGCAACGTGCTGCTGGACAGCAAC
GGCGAGCCAAAGGTGGGTGACTACGGCCTCGCCAAGCTGCTGCCGATGCTGGACCGGTAC
GTCCTGAGCAGTAAGGTCCAGAGCGCGCTCGGGTACATGGCGCCAGAGTTTGCGTGCAAG
ACGGTGAAGATCACCGAGAAATGCGACGTCTATGGCTTCGGGGTGCTTCTGCTGGAGGCC
TTGACGGGCAGGAGGCCCGTGGAGTACTTGGAAGACGACGTGGTTGTCCTGTGTGACCTG
GTCAGAGGCGCGCTGGAGGAAGGCAGGCCAGAGGACTGCGTCGACCCTCGGCTGCGCGGC
GAGTTCCCCATGGACGAGGCCCTGCCGGTCATCAAGCTGGGCCTTGTGTGCACCTCTCAG
GTGCCGTCGAACCGGCCTGGCATGGGTGAGGTCGTGAGCATGCTCGAGCTGGTGAGGAAT
CCTCGAGATATCGCCGAGGATGAGCTGGTTTGAGCCCCGGCCGTCGGGAGATTCTGTTCT
AGTTCACCTTGAGAGCCTTCTCTTTTGTGTTTTTTTTTTCTTCTCTCGGATGCATATATG
GTTGCCCGATGGGGAAGAAAGGAGAGGGAGAGGGGGGTGGTTCAGACTTGGGAGAGTGGG
AAGTTTGTATTATTGTGTTGAAAGCTGAAGGGATGCAATGGAAGGCTGTTTGTTGCTTCT
CTGAAATTCTTTGATGATTCCTTGGTTGGATGAGCTTGTAGATCATGTAGGTATGACTCG
ATGCAACGCAGGCCAGGTTTGCTGATTACCTCGGCATAACTGGAGGAATGTTCTGCTGAT
AGTGCGACTTTTGTTTGACTGAT