Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043029_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:187041036:187047680:1 gene:Zm00001d043029 gene_biotype:protein_coding transcript_biotype:protein_coding description:ENTH/VHS/GAT family protein
Sequence

ATGTACCCGTCAGGGGCCATGGTGGGGGCGGCGCCCGCGGCGCGCCCGAGCGCGTCGTCG
CGGGTGGAGAAGGCCACGAGCCACCTGCTCATGGGGCCCGACTGGGCCGTCAACCTCGAA
ATCTGCGACATCCTCAACGCCGACGTATGGCAAACAAAGGATGTGGTGAAGGCAGTGAAA
AAGAGATTGCAGAACAAGGACCCAAAGGTTCAGTTTTTTGCTTTAACGCTTTTGGAGACA
ATGATGAAGAACTGTGGTGAATATGTTCAGTTTGAAGTTGCTGAACAACATGTTCTGCAA
GAAATGGTTAAAATTATCCAGAAGAAGAATGATATGCAGGTAAGGGACAAAATATTATTG
CTTTTGGACTCCTGGCAAGAGGCATTTGGAGGACCTGGAAGTAAATACCCACAATATCAT
TGGGCATACCTTGAAGTAAAGACGACAGGTGTGGTGTTCCCAAAACGTCCTATGGATGCC
CCACCAATATTTACTCCTCCAGCTACACATAATTCTGAGACCTATGGTTCACCCAGATAT
TCTGCGGGAAGTCTAAGTGACAGAATGTCCTCAGATGTTGAGACTCTGAGTTTAGGAGAT
TTGAATAAGATTCGAAATGTGACAGACCTACTGAATGATATGGTGTATGCTTTAAACCCA
TCTGATCGAATGGCTATTAACGATGAAATTATCACAGATCTTGTGACCCAGTGTCGCTCA
AATCAACAAAAGCTTCTGCAGTTTGTCAGTTCATCAGGGAACGAACAGTTACTAAAGCAA
GGACTGGAGACAAATGATCTCTTACAAAGCGTACTTTCAAAGTATGATGCTGTGGCCTCT
GGTGCTCCTTTGGCGGTTGAAGCATCTGTGAGAGAGGCAATCGAGGCTCCTGCAGTAAAG
TCATATGCACCCCCTGAACATAATGATAATGTTAACGAAGAGGAAGATGAGTTTGCCCAG
CTAGCTCAAAGGAAAAACAAATCCGTCGTAAGTAGTAGCGACGATGCATCATCCAGCACT
TTGGGGGACCTTGCCCTTGTACCCATTGATCAAGCAGTTTCAGAATCGCCATCTTCTGTT
GCAAGCAATGCGCTGGTTCTTCTTGATCCTGCTCCCAGTACTAGCACTGAATCAAAAGAG
CTGGACATGATCGACCTTCTAAGCCTCACCTTGTGCAGCCCTACTCCTGAAACTTCAACA
GATTCTTCAGCACAGGATCAAAATGGACCCCAGCAACCTGCAGTTACACATAATCAAAAA
GGGCTTCAGGAACCTACAGTTACAAATGGGCAACAATATCCTTCTAGTGTGCCACAGTAT
CCTTCAAACTACCAGCCTCACACTGCAAACCAGGCATATGCTCCACAGACCAGCAACTAT
GTGGCACCTTGGGCCCAGACCGGAGCATATCCACCTCAGCCTCCGGCATATGCATCTGGC
TATGCCTACCCTGCACCGCCATGGGTGGCGCCTACACATCCTGTTGATTCTAACCCTTTT
CTTTCGGTCAATTACCAAGATCCACGCCCTGCTGCCACTTCTGTTGCTCAAACAGCAACA
TATGCACCTCCCCCAGCTTCATATCCCCCTTCAATATCTTATGCACAGTTTGCAACCCCC
CAGTCAATTCAGCATAGCAATTCTGTGGCTTCACCGAGCAATGGTCAGATTGCAAATCAA
GCACAAATGAATGTGAATCAACAACCAAAAGATTCTTCGGCAGCATCTAGCAGACCATAC
TACATACCTGATAATCTATTCAGTGATTTGATCGATGCAAAAAGTTTTGGCGGTGGAAAC
AAGATGGGCGGGCCCACTACAATGGGTAGCTCAAATGGTGGCCAGCCTATGATTGGTGGA
AAGAAATAG

Peptide Sequence

PEP ID

Zm00001d043029_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:187041036:187047680:1 gene:Zm00001d043029 transcript:Zm00001d043029_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:ENTH/VHS/GAT family protein
Sequence

MYPSGAMVGAAPAARPSASSRVEKATSHLLMGPDWAVNLEICDILNADVWQTKDVVKAVK
KRLQNKDPKVQFFALTLLETMMKNCGEYVQFEVAEQHVLQEMVKIIQKKNDMQVRDKILL
LLDSWQEAFGGPGSKYPQYHWAYLEVKTTGVVFPKRPMDAPPIFTPPATHNSETYGSPRY
SAGSLSDRMSSDVETLSLGDLNKIRNVTDLLNDMVYALNPSDRMAINDEIITDLVTQCRS
NQQKLLQFVSSSGNEQLLKQGLETNDLLQSVLSKYDAVASGAPLAVEASVREAIEAPAVK
SYAPPEHNDNVNEEEDEFAQLAQRKNKSVVSSSDDASSSTLGDLALVPIDQAVSESPSSV
ASNALVLLDPAPSTSTESKELDMIDLLSLTLCSPTPETSTDSSAQDQNGPQQPAVTHNQK
GLQEPTVTNGQQYPSSVPQYPSNYQPHTANQAYAPQTSNYVAPWAQTGAYPPQPPAYASG
YAYPAPPWVAPTHPVDSNPFLSVNYQDPRPAATSVAQTATYAPPPASYPPSISYAQFATP
QSIQHSNSVASPSNGQIANQAQMNVNQQPKDSSAASSRPYYIPDNLFSDLIDAKSFGGGN
KMGGPTTMGSSNGGQPMIGGKK

Transcript Sequence

Transcript ID

Zm00001d043029_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:187041036:187047680:1 gene:Zm00001d043029 gene_biotype:protein_coding transcript_biotype:protein_coding description:ENTH/VHS/GAT family protein
Sequence

GTCAATAGCGAGACATGTCACGAGGGCTTGACAGCTAAGCACTCGCTTCACGCCGGTGGA
TATTGATAGTATTTTCCTATATCGGAAAAGTCTGCTTTCGCCAGAGCTGCCTTAACGGCC
CCTGATTTTTTGCAAACCTCTGTCCTAAACGCAGCCGGTGGGCGGAGCCGGTAATTATCA
CTCGCCCCTCTTCAATCCTCCTCCGGTCGGAACCCTAGCCCTTCCTGCCAGCGGTGGGCG
GCGCTTGGCCATGTACCCGTCAGGGGCCATGGTGGGGGCGGCGCCCGCGGCGCGCCCGAG
CGCGTCGTCGCGGGTGGAGAAGGCCACGAGCCACCTGCTCATGGGGCCCGACTGGGCCGT
CAACCTCGAAATCTGCGACATCCTCAACGCCGACGTATGGCAAACAAAGGATGTGGTGAA
GGCAGTGAAAAAGAGATTGCAGAACAAGGACCCAAAGGTTCAGTTTTTTGCTTTAACGCT
TTTGGAGACAATGATGAAGAACTGTGGTGAATATGTTCAGTTTGAAGTTGCTGAACAACA
TGTTCTGCAAGAAATGGTTAAAATTATCCAGAAGAAGAATGATATGCAGGTAAGGGACAA
AATATTATTGCTTTTGGACTCCTGGCAAGAGGCATTTGGAGGACCTGGAAGTAAATACCC
ACAATATCATTGGGCATACCTTGAAGTAAAGACGACAGGTGTGGTGTTCCCAAAACGTCC
TATGGATGCCCCACCAATATTTACTCCTCCAGCTACACATAATTCTGAGACCTATGGTTC
ACCCAGATATTCTGCGGGAAGTCTAAGTGACAGAATGTCCTCAGATGTTGAGACTCTGAG
TTTAGGAGATTTGAATAAGATTCGAAATGTGACAGACCTACTGAATGATATGGTGTATGC
TTTAAACCCATCTGATCGAATGGCTATTAACGATGAAATTATCACAGATCTTGTGACCCA
GTGTCGCTCAAATCAACAAAAGCTTCTGCAGTTTGTCAGTTCATCAGGGAACGAACAGTT
ACTAAAGCAAGGACTGGAGACAAATGATCTCTTACAAAGCGTACTTTCAAAGTATGATGC
TGTGGCCTCTGGTGCTCCTTTGGCGGTTGAAGCATCTGTGAGAGAGGCAATCGAGGCTCC
TGCAGTAAAGTCATATGCACCCCCTGAACATAATGATAATGTTAACGAAGAGGAAGATGA
GTTTGCCCAGCTAGCTCAAAGGAAAAACAAATCCGTCGTAAGTAGTAGCGACGATGCATC
ATCCAGCACTTTGGGGGACCTTGCCCTTGTACCCATTGATCAAGCAGTTTCAGAATCGCC
ATCTTCTGTTGCAAGCAATGCGCTGGTTCTTCTTGATCCTGCTCCCAGTACTAGCACTGA
ATCAAAAGAGCTGGACATGATCGACCTTCTAAGCCTCACCTTGTGCAGCCCTACTCCTGA
AACTTCAACAGATTCTTCAGCACAGGATCAAAATGGACCCCAGCAACCTGCAGTTACACA
TAATCAAAAAGGGCTTCAGGAACCTACAGTTACAAATGGGCAACAATATCCTTCTAGTGT
GCCACAGTATCCTTCAAACTACCAGCCTCACACTGCAAACCAGGCATATGCTCCACAGAC
CAGCAACTATGTGGCACCTTGGGCCCAGACCGGAGCATATCCACCTCAGCCTCCGGCATA
TGCATCTGGCTATGCCTACCCTGCACCGCCATGGGTGGCGCCTACACATCCTGTTGATTC
TAACCCTTTTCTTTCGGTCAATTACCAAGATCCACGCCCTGCTGCCACTTCTGTTGCTCA
AACAGCAACATATGCACCTCCCCCAGCTTCATATCCCCCTTCAATATCTTATGCACAGTT
TGCAACCCCCCAGTCAATTCAGCATAGCAATTCTGTGGCTTCACCGAGCAATGGTCAGAT
TGCAAATCAAGCACAAATGAATGTGAATCAACAACCAAAAGATTCTTCGGCAGCATCTAG
CAGACCATACTACATACCTGATAATCTATTCAGTGATTTGATCGATGCAAAAAGTTTTGG
CGGTGGAAACAAGATGGGCGGGCCCACTACAATGGGTAGCTCAAATGGTGGCCAGCCTAT
GATTGGTGGAAAGAAATAGGGTTATTTGTCTATATATATACAGCTGATGGTGATCGGTAG
CTGCCTTGTTATTTATTATGATTACTTTGTCTGGTGTACATTTGTACTTGTATATCGCCA
TTCCCCCTTTTGACAGATTTGGCTGCATTGGTTGATTCGTGGGTGCAACTGTTAAGTTTA
ACAGAGATATGGACAATTGCTCATGTACATAAATGATTAGCATTTGCTCCACTGAGGTGG
ATGGTTGT