Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042960_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:184963741:184964580:1 gene:Zm00001d042960 gene_biotype:protein_coding transcript_biotype:protein_coding description:AT hook motif family protein

Sequence

ATGGAGGGGGCTGATGGCAAGCAAGAGTCAGAAACTACATCTATAATCAAAGTTCCTAAA
GAGCCTGCCATCATTATCAATGGCGTTCCAGATTTTCCTTTTGATTGCACAACTGGTTCT
CAATCTGCAGTAAAAAATGACGCAGAATCTCATGTTGATCCTCGTTTTGGTGAATGGTTA
GAAGGGAGGAAAGTGCGTAAGCTTTTTGGAGACACATATTTCGTCGGGAAAGTGGCCAAG
TATGACATTGAAAGCAACTGGTACACCGTCATTTATGATGATGGAGACCAGGAAGATCTT
GAATGGCGTGAACTTGAGAAAGTTCTACTGCCATTGGACATAACTGTTCCACTTAAAACA
CTTGTTATCGACAAGTGCAAACTTAAGGGATCAGTTTCTGACTCCAAACCAAAGGGCGCT
GAAGACACACCAGGTTCTGTGGCACTTGTGCCAGTGCAAGATGATACACAAGAATCTTCT
AGGAAACAGAATAGCACCCTTATTCGCAATGCAATGACAGCTCGGGCAGAAAGACTGAAA
AGAGAAAATTTGCGTGTTCAAAGCAGGAGATCTAGAACTCGGTTATCCTAG

Peptide Sequence

PEP ID

Zm00001d042960_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:184963741:184964580:1 gene:Zm00001d042960 transcript:Zm00001d042960_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:AT hook motif family protein

Sequence

MEGADGKQESETTSIIKVPKEPAIIINGVPDFPFDCTTGSQSAVKNDAESHVDPRFGEWL
EGRKVRKLFGDTYFVGKVAKYDIESNWYTVIYDDGDQEDLEWRELEKVLLPLDITVPLKT
LVIDKCKLKGSVSDSKPKGAEDTPGSVALVPVQDDTQESSRKQNSTLIRNAMTARAERLK
RENLRVQSRRSRTRLS

Transcript Sequence

Transcript ID

Zm00001d042960_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:184963741:184964580:1 gene:Zm00001d042960 gene_biotype:protein_coding transcript_biotype:protein_coding description:AT hook motif family protein

Sequence

ATGGAGGGGGCTGATGGCAAGCAAGAGTCAGAAACTACATCTATAATCAAAGTTCCTAAA
GAGCCTGCCATCATTATCAATGGCGTTCCAGATTTTCCTTTTGATTGCACAACTGGTTCT
CAATCTGCAGTAAAAAATGACGCAGAATCTCATGTTGATCCTCGTTTTGGTGAATGGTTA
GAAGGGAGGAAAGTGCGTAAGCTTTTTGGAGACACATATTTCGTCGGGAAAGTGGCCAAG
TATGACATTGAAAGCAACTGGTACACCGTCATTTATGATGATGGAGACCAGGAAGATCTT
GAATGGCGTGAACTTGAGAAAGTTCTACTGCCATTGGACATAACTGTTCCACTTAAAACA
CTTGTTATCGACAAGTGCAAACTTAAGGGATCAGTTTCTGACTCCAAACCAAAGGGCGCT
GAAGACACACCAGGTTCTGTGGCACTTGTGCCAGTGCAAGATGATACACAAGAATCTTCT
AGGAAACAGAATAGCACCCTTATTCGCAATGCAATGACAGCTCGGGCAGAAAGACTGAAA
AGAGAAAATTTGCGTGTTCAAAGCAGGAGATCTAGAACTCGGTTATCCTAG