Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042955_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:184754396:184758424:1 gene:Zm00001d042955 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein NETWORKED 2D
Sequence

ATGCTGCGGCGCGTGGCGAGCAACGCCTACTCATGGTGGTGGGCGAGCCACATCCGCAAC
ACGCAGTCCAAATGGCTCGACAACAATCTTCAAGAGATGGAAATGAGGGTGAAGTCCATG
ATCAAACTCATAGAAATAAATGCTGACACTTTCGCAAAGAAGGCAGAGCTGTACTTCAAG
AACAGGCCTGAGCTGGCAAACCTTGTTGAGGAGACGTATAGATCTTACCAGGCGCTCGCT
GATCGATGTGATCGGATATCAGGAGAGCTCCACAAGTCAAATCATACCATAACAACTGTG
TTTCCAGAACAAGTACAACTCTCACTGCAAAATGACAATGGCGACGGATTCCCAAGGGGT
ATCACAGGGATCAATATCATCAGAGGAACTAGCCCAGCTTCAAAGAGGACACAGACGCAT
AGGAGGATTACCTCTCAGATGAGTAAAGAAAAGGCACAAGAAGAGATTGAGAGGCTCCAG
AAGGAGATTTTGGTGTTACAGACCGAGAAAGAGTTCTTCAAGTGCTCATATGAATCTTCA
CTAGATAAGTACTTAGATATTGAACGAAGGGCAACAGAGACACAAGAGGAGGTATGGAGC
TTGCAAGAGACTTTTAATACCAACACAGTTATCGAAGACAATGAAGCTCGAGCTTTGATG
GCTGCACGTGCCCTCATTTCATGTGAGGATACATTGATTAACTTGCAAGATCAGCAAAAT
CGATCATGTCAAGAGGCAACAACAGAGTTCCAACGAGTCATAGACACTAAAAAGAAGCTA
AAAGCTTTCAAGAGTGAGTGTGGGCACTCTGAGAACCAAAAGGAGCTAAGTGATCAACAA
CATATAGTGACCAGCTCTGCACATCCATCTATAGAGAATAATGGCCCCATTCTGCAAGAC
CATAGGCTCCATCTACAGGAAATATGCCAGAAGATCAAACTACAATTTAATTCATGCTCA
GAGGCATCTGTAGTGCATTTAGCAGGAATGGTTGATGAATTCGTGGATAAGGTGATCGCA
CTAGAAATTGCAGCTACAACTCAGACTGCTCAAATCAATAGAATGAGAGCTGAGGCAGAT
GAGCTGCAAAAATGTATGAATAGTTTGGAGGAAGAGAAGGAAGGTTTAGTTGGGGATTCC
AATAAGTTGTCTGAAAGGTTGAGGCAAGTTGAGGAGGTGCTGCAAACAATTCAACGAATT
GAGAAGTCTGTGCACATTGAAAATGGAAATATTCAGAGACAATTAACCGAAGCATGCAAC
AATCTTACTGATTTTGTGGAGAGGTTGGATGTGCCACTAAGCGAAGAAACAATAGATTCA
TCTGAAGGGTCCAAAGGAATTGCTTCTGAAGAAGATGCAGATAAGCCTGACACTCTCTCT
GACCCATTTCAAGCTGATTCAGGCACTGTAGGTGAATCAATGGATGGAGACTCATTGTAC
TCATTCGATATCTCTAGTGAGGCACATGAAGAAGATGTAGATGACACCTTAGGGTGGCAG
CAAGTAGTTTTGAATGGGTTGGAGGGCAAGGATAAAATCCTCTTAAAAGATTATGCATCC
ATCCTTCGGAACTACAAAGATACAAGAAAGCAACTTTCAGAAATAGAGAAGAAAAATCAA
GAATATCATCTTGATTCTATGTCAAAAACGGAAGAGTTAAAGAGTGTCAATGCAACAAAA
GATGACGAAATTCACTCTCTTAGGCAAATGTTGAGCTCTTTACAGTCCAAGATCAACACC
TATCGAATCCAATTTGTTGAAAAGTCTGAAGAATCATCCAAAACAAACAACGATCCTTGT
CTAGAAGACAAAGAGATTTGTGAGATAGAAGAATACCTAAAGAATTGCCAAAATGAAGAA
CCACATGTTTCTTTATTAGAGGAGAAATTTAGAGAAGAAATTAACAAAGTATTAGATGAA
AGCTTAGACTTCTGGTTGAGGTTCAGTACATCGTATCGTTATATCCAGAAATTCCAAAAA
GCATTTGATAAAGCAAAAGCAGAAGTGGATAGACTTACAGATACAAAAGCTCTGGAGGGC
TTAGACACTGGTTGTACTGGTCAGTTTGTGAGAAAACAAGAGCCAACTATCCTTGAAAAG
AAACTACGTGACTTAAGTACTGATCTTCAAGTTTGGTTGGAAAAAAATGTGCTGTTGCAG
GGGGAGCTTGAGAGAAGATTTTTATTGATATGCAACATACAAGAGGAGATATCTAAGGTC
ACAACATTGAATCGAACCAATGAAGCTCACTTTACTCCTTTACAGGCTGCAAAGTTCCAT
GGTGAGGTGAGTAATATGAAGCAAGAGAATAACAAGGTCACCAAAGAGCTACAAGCTGGG
CTCGAGCATGTAAGGGGCCTCCAAGTGGAAATTGGGAGGACTGTTCTGAAGCTCAGAGAC
AATATTGAACTATCTTTTGGGAGAAGCAGTCGAGCACATCAGAACTTCAGATATCTATCA
GGGAAGGCCGGGGTACCTCAACGAACTTCCTTATTTGGTTCTAGGACGAAAAAGACATCA
TTATTTTCATGTATGCCTCCCATTGCCAAAGCCGATTTCTGA

Peptide Sequence

PEP ID

Zm00001d042955_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:184754396:184758424:1 gene:Zm00001d042955 transcript:Zm00001d042955_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein NETWORKED 2D
Sequence

MLRRVASNAYSWWWASHIRNTQSKWLDNNLQEMEMRVKSMIKLIEINADTFAKKAELYFK
NRPELANLVEETYRSYQALADRCDRISGELHKSNHTITTVFPEQVQLSLQNDNGDGFPRG
ITGINIIRGTSPASKRTQTHRRITSQMSKEKAQEEIERLQKEILVLQTEKEFFKCSYESS
LDKYLDIERRATETQEEVWSLQETFNTNTVIEDNEARALMAARALISCEDTLINLQDQQN
RSCQEATTEFQRVIDTKKKLKAFKSECGHSENQKELSDQQHIVTSSAHPSIENNGPILQD
HRLHLQEICQKIKLQFNSCSEASVVHLAGMVDEFVDKVIALEIAATTQTAQINRMRAEAD
ELQKCMNSLEEEKEGLVGDSNKLSERLRQVEEVLQTIQRIEKSVHIENGNIQRQLTEACN
NLTDFVERLDVPLSEETIDSSEGSKGIASEEDADKPDTLSDPFQADSGTVGESMDGDSLY
SFDISSEAHEEDVDDTLGWQQVVLNGLEGKDKILLKDYASILRNYKDTRKQLSEIEKKNQ
EYHLDSMSKTEELKSVNATKDDEIHSLRQMLSSLQSKINTYRIQFVEKSEESSKTNNDPC
LEDKEICEIEEYLKNCQNEEPHVSLLEEKFREEINKVLDESLDFWLRFSTSYRYIQKFQK
AFDKAKAEVDRLTDTKALEGLDTGCTGQFVRKQEPTILEKKLRDLSTDLQVWLEKNVLLQ
GELERRFLLICNIQEEISKVTTLNRTNEAHFTPLQAAKFHGEVSNMKQENNKVTKELQAG
LEHVRGLQVEIGRTVLKLRDNIELSFGRSSRAHQNFRYLSGKAGVPQRTSLFGSRTKKTS
LFSCMPPIAKADF

Transcript Sequence

Transcript ID

Zm00001d042955_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:184754396:184758424:1 gene:Zm00001d042955 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein NETWORKED 2D
Sequence

AATGTTTACCGCCTCGCCTCTTCTCGTCCCGGGGCCCTGCCGGCCCCGCTCCAACCCCCA
AGCTCGTGGCAAGCGCCGCGCAACTGCGCAAGTAGCGATGGCAGTAGTAGACACGCTAGG
GGAAGGTTTGGACGAATAGAAGCTAGAGGCGAAGGGCGAGGAGGAGAAGCACGAGATAAG
GAAATTGACGACGGAGGGAGCAGACCGCGATGCTGCGGCGCGTGGCGAGCAACGCCTACT
CATGGTGGTGGGCGAGCCACATCCGCAACACGCAGTCCAAATGGCTCGACAACAATCTTC
AAGAGATGGAAATGAGGGTGAAGTCCATGATCAAACTCATAGAAATAAATGCTGACACTT
TCGCAAAGAAGGCAGAGCTGTACTTCAAGAACAGGCCTGAGCTGGCAAACCTTGTTGAGG
AGACGTATAGATCTTACCAGGCGCTCGCTGATCGATGTGATCGGATATCAGGAGAGCTCC
ACAAGTCAAATCATACCATAACAACTGTGTTTCCAGAACAAGTACAACTCTCACTGCAAA
ATGACAATGGCGACGGATTCCCAAGGGGTATCACAGGGATCAATATCATCAGAGGAACTA
GCCCAGCTTCAAAGAGGACACAGACGCATAGGAGGATTACCTCTCAGATGAGTAAAGAAA
AGGCACAAGAAGAGATTGAGAGGCTCCAGAAGGAGATTTTGGTGTTACAGACCGAGAAAG
AGTTCTTCAAGTGCTCATATGAATCTTCACTAGATAAGTACTTAGATATTGAACGAAGGG
CAACAGAGACACAAGAGGAGGTATGGAGCTTGCAAGAGACTTTTAATACCAACACAGTTA
TCGAAGACAATGAAGCTCGAGCTTTGATGGCTGCACGTGCCCTCATTTCATGTGAGGATA
CATTGATTAACTTGCAAGATCAGCAAAATCGATCATGTCAAGAGGCAACAACAGAGTTCC
AACGAGTCATAGACACTAAAAAGAAGCTAAAAGCTTTCAAGAGTGAGTGTGGGCACTCTG
AGAACCAAAAGGAGCTAAGTGATCAACAACATATAGTGACCAGCTCTGCACATCCATCTA
TAGAGAATAATGGCCCCATTCTGCAAGACCATAGGCTCCATCTACAGGAAATATGCCAGA
AGATCAAACTACAATTTAATTCATGCTCAGAGGCATCTGTAGTGCATTTAGCAGGAATGG
TTGATGAATTCGTGGATAAGGTGATCGCACTAGAAATTGCAGCTACAACTCAGACTGCTC
AAATCAATAGAATGAGAGCTGAGGCAGATGAGCTGCAAAAATGTATGAATAGTTTGGAGG
AAGAGAAGGAAGGTTTAGTTGGGGATTCCAATAAGTTGTCTGAAAGGTTGAGGCAAGTTG
AGGAGGTGCTGCAAACAATTCAACGAATTGAGAAGTCTGTGCACATTGAAAATGGAAATA
TTCAGAGACAATTAACCGAAGCATGCAACAATCTTACTGATTTTGTGGAGAGGTTGGATG
TGCCACTAAGCGAAGAAACAATAGATTCATCTGAAGGGTCCAAAGGAATTGCTTCTGAAG
AAGATGCAGATAAGCCTGACACTCTCTCTGACCCATTTCAAGCTGATTCAGGCACTGTAG
GTGAATCAATGGATGGAGACTCATTGTACTCATTCGATATCTCTAGTGAGGCACATGAAG
AAGATGTAGATGACACCTTAGGGTGGCAGCAAGTAGTTTTGAATGGGTTGGAGGGCAAGG
ATAAAATCCTCTTAAAAGATTATGCATCCATCCTTCGGAACTACAAAGATACAAGAAAGC
AACTTTCAGAAATAGAGAAGAAAAATCAAGAATATCATCTTGATTCTATGTCAAAAACGG
AAGAGTTAAAGAGTGTCAATGCAACAAAAGATGACGAAATTCACTCTCTTAGGCAAATGT
TGAGCTCTTTACAGTCCAAGATCAACACCTATCGAATCCAATTTGTTGAAAAGTCTGAAG
AATCATCCAAAACAAACAACGATCCTTGTCTAGAAGACAAAGAGATTTGTGAGATAGAAG
AATACCTAAAGAATTGCCAAAATGAAGAACCACATGTTTCTTTATTAGAGGAGAAATTTA
GAGAAGAAATTAACAAAGTATTAGATGAAAGCTTAGACTTCTGGTTGAGGTTCAGTACAT
CGTATCGTTATATCCAGAAATTCCAAAAAGCATTTGATAAAGCAAAAGCAGAAGTGGATA
GACTTACAGATACAAAAGCTCTGGAGGGCTTAGACACTGGTTGTACTGGTCAGTTTGTGA
GAAAACAAGAGCCAACTATCCTTGAAAAGAAACTACGTGACTTAAGTACTGATCTTCAAG
TTTGGTTGGAAAAAAATGTGCTGTTGCAGGGGGAGCTTGAGAGAAGATTTTTATTGATAT
GCAACATACAAGAGGAGATATCTAAGGTCACAACATTGAATCGAACCAATGAAGCTCACT
TTACTCCTTTACAGGCTGCAAAGTTCCATGGTGAGGTGAGTAATATGAAGCAAGAGAATA
ACAAGGTCACCAAAGAGCTACAAGCTGGGCTCGAGCATGTAAGGGGCCTCCAAGTGGAAA
TTGGGAGGACTGTTCTGAAGCTCAGAGACAATATTGAACTATCTTTTGGGAGAAGCAGTC
GAGCACATCAGAACTTCAGATATCTATCAGGGAAGGCCGGGGTACCTCAACGAACTTCCT
TATTTGGTTCTAGGACGAAAAAGACATCATTATTTTCATGTATGCCTCCCATTGCCAAAG
CCGATTTCTGACATGAGGCCAAGTCTTTTTAGATAACATTGGTTAGAGGGTTAGCTAATT
TTTTCTTCTGTTTGATATGGGTGGTTCTCTATGAACATGCTTAAAAAATTGATGCAAGGT
AAGACAGCTCCAAACATTATACACGTAGATTGAGAAAATTCTTGAGCCCTTGTTCTACCC
ATTCATAACGACACTATAGCCTATAGTTGAGACATGTACTTTATCGTGGGATAGATGAGA
CGATTCTTTTACCTCAGCCTGAAAATCATTCCCATGAAGGAGTCAAACTCAAGACATGAG
AAGTGTTATTTACATCATCTAACAATTTAGCTAGAGGCCTTTCATGTGAACATGTTAGTT
TTGATTGAATATTTAATTTTTGTAGGTTTTAAACTGAAAAGTATCATGTAACCAACTTGA
TTTTTTCGCTGATTTGTTCGGTGATGTGTAATTTGTAGTCCTGTAAATGTGAATTTTGTA
TAATGTACAACGCCACACTCATTCATACGAAAATACTAGAAGAATATGACATGCAAAAGT
ATAATGCCACACTCATTCATGCCAGTAATGTGACTTTTGTGTGGCATAGTGTTGTAATGT
GATCAGTTGAAAACTGAGCTGTTAAATCATAAATTAGTGTTTTTGCCTACCCACTAGAAG
TAGTGGTGCAACTATTTGTAAGTTAACCATCTTTGAGAAAGTTTTGTCTT