Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042938_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:3:184560066:184565461:1 gene:Zm00001d042938 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase AFC1
Sequence	ATGGAGGCGCAGTGGCTCGCGGAGTATCCGCACCAGGGGGCCGACAAGCGGCCGCGCAAA CGGGCCCGGCTCGCCTGGGATGTCGCGCCCACGCTGTTCCAGCCCCCCAAGGCAATTCCG ATGCTATATTGTGGGCAGGAACTAATTAATGGTAATTTCACGACTGCATTTCTTCCACCA CCATCAATTTATTACACCGGGCCGCCACGGAATATTTCGCCTCCTTGGAGACCAGATGAC AAGGATGGACACTATGTTTTTGCGGTTGGAGAGAATCTCACACCAAGATATAGGATACTT AACAAGATGGGTGAAGGGACATTTGGTCAAGTTTTGGAGTGCTGGGACTTGGAAAACCAA GAAGCAGTGGCTATCAAGATTGTACGCTCCCTTCAGAAATACCGAGAGGCTGCTATGATA GAAATTGATGTGCTCCAGAGACTTGGGAAGCATGACTTTACTGGCAGCCGTTGTGTGCAA ATACGGAACTGGTTTGACTATCGTAATCATATTTGTATAGTATTTGAGAAGCTTGGGCCA AGCCTATATGACTTTCTGCGAAAGAATAGCTACCGTTCATTTCCTATTGACCTTGTCCGA GAATTTGCCAGACAAATATTAGAGTCTGTTGCATTTATGCATGACTTGCGACTTATTCAC ACGGATCTGAAGCCAGAAAACATTCTCCTTGTTTCATCAGAGTCTATCAGGGTGCCTGAT TATAAGGTTTCTATACGACCACCAAAGGATGGTTCTTTCTTTAAGAACCTTCCAAAATCT AGTGCTATCAAGCTGATTGATTTTGGGAGTACAACTTTCGAGAGCCAAGACCACAATTAT GTGGTGTCGACAAGACATTATCGTGCACCAGAAGTTATCCTTGGTCTTGGGTGGAACTAT CCATGCGACTTGTGGAGTGTGGGTTGCATTTTAGTTGAGCTTTGTTCGGGGGAAGCTCTC TTTCAAACACATGAAAACTTGGAGCATTTGGCTATGATGGAGAAGGTCTTAGGGCCTCTC CCAAAGCATATGATTGTCAGAGCTGATCGGCGTGCTGAAAAGTACTTCAAGCGCGGAGTA AGGTTGGACTGGCCAGAGGGAGCGGCCTCACGAGAGAGCATGAAGGCAGTCTGGAAATTG CCTCGTCTGCAGAACCTTGTGATGCAACATGTTGATCATTCTGCTGGAGATCTAATTGAT CTTCTTCAAGGACTTCTTCGGTATGATCCTAATGAGCGCCTGAAAGCACATGAAGCTCTA CAACACCCTTTCTTTACCAGATGCATCAGAAGATGTGGTTTCTGA

Peptide Sequence

PEP ID	Zm00001d042938_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:3:184560066:184565461:1 gene:Zm00001d042938 transcript:Zm00001d042938_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase AFC1
Sequence	MEAQWLAEYPHQGADKRPRKRARLAWDVAPTLFQPPKAIPMLYCGQELINGNFTTAFLPP PSIYYTGPPRNISPPWRPDDKDGHYVFAVGENLTPRYRILNKMGEGTFGQVLECWDLENQ EAVAIKIVRSLQKYREAAMIEIDVLQRLGKHDFTGSRCVQIRNWFDYRNHICIVFEKLGP SLYDFLRKNSYRSFPIDLVREFARQILESVAFMHDLRLIHTDLKPENILLVSSESIRVPD YKVSIRPPKDGSFFKNLPKSSAIKLIDFGSTTFESQDHNYVVSTRHYRAPEVILGLGWNY PCDLWSVGCILVELCSGEALFQTHENLEHLAMMEKVLGPLPKHMIVRADRRAEKYFKRGV RLDWPEGAASRESMKAVWKLPRLQNLVMQHVDHSAGDLIDLLQGLLRYDPNERLKAHEAL QHPFFTRCIRRCGF

Transcript Sequence

Transcript ID	Zm00001d042938_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:184560066:184565461:1 gene:Zm00001d042938 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase AFC1
Sequence	AACCGCTTCGTTTCCTCCCCTCCCAAATCCCCCAACCCCAAATCGAGCTCCGAGTCGACG GCCCTTGCCGAACCGCTCTCCAGTTCCCAAATCCCCCTCCCCCGAAATTCACCGCCGGAC TGGCCCGGCCGATGGAGTGACCCAGCTAGGGTTCCGAAGCCGGCAATGGAGGCGCAGTGG CTCGCGGAGTATCCGCACCAGGGGGCCGACAAGCGGCCGCGCAAACGGGCCCGGCTCGCC TGGGATGTCGCGCCCACGCTGTTCCAGCCCCCCAAGGCAATTCCGATGCTATATTGTGGG CAGGAACTAATTAATGGTAATTTCACGACTGCATTTCTTCCACCACCATCAATTTATTAC ACCGGGCCGCCACGGAATATTTCGCCTCCTTGGAGACCAGATGACAAGGATGGACACTAT GTTTTTGCGGTTGGAGAGAATCTCACACCAAGATATAGGATACTTAACAAGATGGGTGAA GGGACATTTGGTCAAGTTTTGGAGTGCTGGGACTTGGAAAACCAAGAAGCAGTGGCTATC AAGATTGTACGCTCCCTTCAGAAATACCGAGAGGCTGCTATGATAGAAATTGATGTGCTC CAGAGACTTGGGAAGCATGACTTTACTGGCAGCCGTTGTGTGCAAATACGGAACTGGTTT GACTATCGTAATCATATTTGTATAGTATTTGAGAAGCTTGGGCCAAGCCTATATGACTTT CTGCGAAAGAATAGCTACCGTTCATTTCCTATTGACCTTGTCCGAGAATTTGCCAGACAA ATATTAGAGTCTGTTGCATTTATGCATGACTTGCGACTTATTCACACGGATCTGAAGCCA GAAAACATTCTCCTTGTTTCATCAGAGTCTATCAGGGTGCCTGATTATAAGGTTTCTATA CGACCACCAAAGGATGGTTCTTTCTTTAAGAACCTTCCAAAATCTAGTGCTATCAAGCTG ATTGATTTTGGGAGTACAACTTTCGAGAGCCAAGACCACAATTATGTGGTGTCGACAAGA CATTATCGTGCACCAGAAGTTATCCTTGGTCTTGGGTGGAACTATCCATGCGACTTGTGG AGTGTGGGTTGCATTTTAGTTGAGCTTTGTTCGGGGGAAGCTCTCTTTCAAACACATGAA AACTTGGAGCATTTGGCTATGATGGAGAAGGTCTTAGGGCCTCTCCCAAAGCATATGATT GTCAGAGCTGATCGGCGTGCTGAAAAGTACTTCAAGCGCGGAGTAAGGTTGGACTGGCCA GAGGGAGCGGCCTCACGAGAGAGCATGAAGGCAGTCTGGAAATTGCCTCGTCTGCAGAAC CTTGTGATGCAACATGTTGATCATTCTGCTGGAGATCTAATTGATCTTCTTCAAGGACTT CTTCGGTATGATCCTAATGAGCGCCTGAAAGCACATGAAGCTCTACAACACCCTTTCTTT ACCAGATGCATCAGAAGATGTGGTTTCTGAGGCTACACTGAGATTGAAAATGTCAATGCT GTATTTCTTCATTTTGATGTGTAAGAACTACAAAAAAGTGGAGATGTTCTACGAAAAATG AAATATGCTAACTTGCATTCTGTTCAATGATTTGAAAGGTAATTGGTGTATATAAGCAGA GTTCTCTGACACTCGATCCATTTTAACTGGATGTCATTTTCCAATTGATACAAATTCCTG TCTTCCCCATTCGTATACTAATTTTGCCAGACTCTTCAGTACTAGCAGGTAGCATGCAGA AATCCCTAACCAGGTGGTGTCAATTGAGGATAAATGGGATTAAGTGGTTTCATGGAAGAT TGGAACACTATTTAATGGTGGCATACAGTGATCTCGGGTCAACAGGTAATCATTTTGCAT GCATTTAGAATTTGAGTATTTCTCGTGCAAGTTGGCAATGATATTTTTTGCCATGGCACT TTTGGTTTGGTGGTGTTTTTCTTTTCCTCTTGAATTTCTGATTCTTTCAAGAAATAAAAC AAGTACGTCAACTTGTTTTGTATGGCAAATATTGCTTGAGATTTGTCTTTATATCTTATA ATAAGTCTCACGGTCAAGCTTGGTTTTCACTGAGCTTGAGTTTACCACTTGACTAGACAA ATTGTTGATATAAAAGCTATCCCCACTCTCACAAAGGTATCATTATCACTTCTTGAGGAA TCAATATTTTTTATTGGACCAAATATATAAAGGGATTGTTATTTTTAAGTATAATTAGAT TAGTCATTGACTGTATTTTAAAAATGAGCTTATTTGGAGATACAAATGTTGCTAATATGT TCTAAAACCTAGTCAAACTTCAGAAAGTTTTACATGGACAAAACTTAGGTGACTTTTGGA TACCATATTTATGTTTTTTTTCTAAAGTTTCTTTTTTCGCAAAAAAGATGATGTGCTGCT TTCAAAAAATATTTCCTCCATCCTGAATTGTAAGTTGTTTTGACCTTTTTTTAAGTGCAT AGCAAAGCTATGTATTTAGATATGTACACCACGTCTACACGCACAGATGCGCAAGCATGC AGATGTATGCGTGTGTAGATAGATAGATAGATTGATAGACACACACACTTATGAATCTAG AAAATCTAAAACGACTTCAGGTTTGGAATGCAGTTGTTCGCTTCCTTTGTTTCTATATGA GCTTTGGTGGTTGGCATGTCTCGGAATGAAATTACGATATTACATTGGTATTTTATTTGG ACTTCTGTTTTTATATTTTCTGCTGGAGCAATGGTGGGGTAATTCTTTGTTCTCTTACGA CCGCTAACCTGATCAATGGAATGGCTTCATGTACCTTCTAACCTTTACATTTGCAGCAAA AGTGCACGACACAAGCACGGCACACGTATCTTGCAGTTTCCTATTGTATATGGCCTTTTT CGTGTTTTCCCTCAGCGGCGTGTCACGCTACGCTTACAACCGCTCTGCTTTGACACAGAA CCGTGAACGATGTAATGCTGACTAAGGCTGACCTGGGGACCCTATACCAGTTGGGATTTG GTACCGT