Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042916_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:3:183861614:183870789:1 gene:Zm00001d042916 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-fucosyltransferase family protein
Sequence

ATGTACCGCAGCCCGCAGCTCTACGCCCGTCTCCGCGCCGACATGGACGCCGATAATGCC
ACCGACGCGCTAGCAGCTGTATGGCGGCATGCTTACAGAGGTGGTGTTTGGAGACCTTGC
ATAAGCAATAATACCAATGGCTTGCCTGAATCAAATGGCTACATATACATTGAGGCTAAT
GGTGGTTTGAATCAACAACGAACATCGATTTGCAATGCAGTTGCTGTTGCTGGCTTTCTG
AATGCGACTCTTGTAATCCCAAACTTCCATTATCACAGCATTTGGAGGGATCCTAGCAAA
TTTAGTGATATCTATGACGAGGATTACTTTATCGAACGCTTAAAAAATGATGTCCGGGTG
ATTGACAAGGTGCCTGAGTTCATAATGGAGCGATTTGGTCACAATCTGAGCAATGCATTT
AATTTCAAGATAAAAGCTTGGTCTCCTATTCAATTCTATGAAGATATTGTTCTCCCTAAG
TTGATCGAAGAAAGACTCATAAGGATATCACCTTTTGCAAACCGGCTGTCATTTGATGCT
CCTCCAGCTGTTCAACGTCTACGATGTCTAGCAAATTTTGAAGCCCTAAAATTTTCTAAA
CCAATCACTACTATATCTAACACTTTAATTTCTCGGATGAGAGAAAAAAGTGCTGAAAAT
AATGGGAAATATGTAGCAGTGCATCTCCGCTTTGAAGAGGATATGGTAGCCTTCTCTTGT
TGTGTCTTTGATGGTGGTGACAATGAGAAGAAGGAACTGGATGCAGCTAGGGAAAAAGGT
TGGAGAGGGAAATTTACAAGGCCAGGACGTGTAATAAGGCCTGGAGCAATAAGGATGAAT
GGGAAATGTCCACTGACTCCTTTGGAGGTTGGATTAATGCTGCGTGGAATGGGTTTTAAC
AATAATACTGCAATATATTTAGCTTCTGGAAGGATATATAAAGCAGAAAAGAACATGTCT
CCTCTCCTTGAAATGTTCCCCCTCTTGCAGACAAAAGAAACATTGGCACTGGATGAAGAA
CTTGCTCCATTCAAGGTAGTATAG

Peptide Sequence

PEP ID

Zm00001d042916_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:3:183861614:183870789:1 gene:Zm00001d042916 transcript:Zm00001d042916_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-fucosyltransferase family protein
Sequence

MYRSPQLYARLRADMDADNATDALAAVWRHAYRGGVWRPCISNNTNGLPESNGYIYIEAN
GGLNQQRTSICNAVAVAGFLNATLVIPNFHYHSIWRDPSKFSDIYDEDYFIERLKNDVRV
IDKVPEFIMERFGHNLSNAFNFKIKAWSPIQFYEDIVLPKLIEERLIRISPFANRLSFDA
PPAVQRLRCLANFEALKFSKPITTISNTLISRMREKSAENNGKYVAVHLRFEEDMVAFSC
CVFDGGDNEKKELDAAREKGWRGKFTRPGRVIRPGAIRMNGKCPLTPLEVGLMLRGMGFN
NNTAIYLASGRIYKAEKNMSPLLEMFPLLQTKETLALDEELAPFKVV

Transcript Sequence

Transcript ID

Zm00001d042916_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:183861614:183870789:1 gene:Zm00001d042916 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-fucosyltransferase family protein
Sequence

CGCTCGACAGTGTGCCCCGCATCATCCCGCGCCCGGCGCCCGGGTCAATGTACCGCAGCC
CGCAGCTCTACGCCCGTCTCCGCGCCGACATGGACGCCGATAATGCCACCGACGCGCTAG
CAGCTGTATGGCGGCATGCTTACAGAGGTGGTGTTTGGAGACCTTGCATAAGCAATAATA
CCAATGGCTTGCCTGAATCAAATGGCTACATATACATTGAGGCTAATGGTGGTTTGAATC
AACAACGAACATCGATTTGCAATGCAGTTGCTGTTGCTGGCTTTCTGAATGCGACTCTTG
TAATCCCAAACTTCCATTATCACAGCATTTGGAGGGATCCTAGCAAATTTAGTGATATCT
ATGACGAGGATTACTTTATCGAACGCTTAAAAAATGATGTCCGGGTGATTGACAAGGTGC
CTGAGTTCATAATGGAGCGATTTGGTCACAATCTGAGCAATGCATTTAATTTCAAGATAA
AAGCTTGGTCTCCTATTCAATTCTATGAAGATATTGTTCTCCCTAAGTTGATCGAAGAAA
GACTCATAAGGATATCACCTTTTGCAAACCGGCTGTCATTTGATGCTCCTCCAGCTGTTC
AACGTCTACGATGTCTAGCAAATTTTGAAGCCCTAAAATTTTCTAAACCAATCACTACTA
TATCTAACACTTTAATTTCTCGGATGAGAGAAAAAAGTGCTGAAAATAATGGGAAATATG
TAGCAGTGCATCTCCGCTTTGAAGAGGATATGGTAGCCTTCTCTTGTTGTGTCTTTGATG
GTGGTGACAATGAGAAGAAGGAACTGGATGCAGCTAGGGAAAAAGGTTGGAGAGGGAAAT
TTACAAGGCCAGGACGTGTAATAAGGCCTGGAGCAATAAGGATGAATGGGAAATGTCCAC
TGACTCCTTTGGAGGTTGGATTAATGCTGCGTGGAATGGGTTTTAACAATAATACTGCAA
TATATTTAGCTTCTGGAAGGATATATAAAGCAGAAAAGAACATGTCTCCTCTCCTTGAAA
TGTTCCCCCTCTTGCAGACAAAAGAAACATTGGCACTGGATGAAGAACTTGCTCCATTCA
AGGTAGTATAGGATAACTGCATTTTTTTGAAGGAACATTTTATTACTCTGCTTTTAAGAA
AGCATATAAAAGATCCAACGATACAGGCCAGGATAACAAGAACCGACCACTCTGAACAGA
CACACTAGAGAGTTGCAAAAAACCAAAGGAAAACGACCACCAGCACACACAGGCGCACAC
ACTCCCTTCCAGACTCTAGGCCACGAACCAACACTCCAGAAAGAGGCCGCTTCAGATGGT
CCCGATGTCAGACACCTCTCCAACCGCCAGCTGGGAGTTACTAAGCCATTGCTTCAGGGA
ACTGATCCAGCACCTCGCCTTCTCCTGGTCTTTCGGCTTTGAGTAAGGGAGTCCCAGGTC
TGCAGAAATGATATGGAGTATACAAGATCACAGGTGGACTGCTAGGAAACCTCCTCTCGA
TCGCCATCCTATTCCGATTACACCACATGGCCCAAAACAGACCTGCAAACATGAAAAGGT
AAAGAGTACGGCCCCCCTTGAGCTGAGGGACTACCCAGTTCCCAAAGAAGTCTTCCATCG
ATCTGGGGGGAGGGTCCAGACCAGTGGCGGAGCGCACAAAGAAAATAAGGTATGGCCATG
GTTCCATTCAGCGACATTGTAGCTGGTAGTCGCAGTGCGAGCGCAAACTTGTGTCTGGTG
GCCGCATGGACTTGAGTTCGAGGAGGCCTGTTGATTGCGACACTACACACATTGTACATG
AGCTGGAGAGAGTAGAGCGTCGGAGAGAACAAGCCATGAGCAGAGAATATATTACGACGG
CCAGGCTAAGGTATGGCGCGCGCCATACCACGCCATACCGAGCGCTCCGCGCCTGGTCCA
GACCAAAGACAAGATACAAGCAGCACCATACATATTTGGCTAACGCGCAGTGCACAAAAA
TGTGATCAATAATTTTGTTTTCTCCACACAGGGAGCAAGATCCACAGCCTTTCCAACCTC
TTTTTTTCATTACCATCACACCTTGAATTTTCCTATTATAAAGTTGCCACAGGAAGATCT
TGATTTTCAAAGGTACCCTGCACTTCCAGATTATACAATGGATGTTTTTAGAGATTCCCC
CATCTGTTCTAAACCTGTAAAGAGACTTTGTAGTGAACTGGTGAGAATTGTCCAATGCCC
AGGACACCACGTCTCCTTGAGAACATGTGTATTCCTGAAGCTCAGAACACATGTCCATCC
ACTCATCAAATTCAGAGGTCGTAAGAGTTCTAGTAAAATCCAAATTCCAACTTCCATCCT
CCAGGCAGTCAGAAACCCGAACCTTTTTGTTCGAGCAGATGTCAAAAACCTGGAATATCC
AACGCTCAGAGGCACCTCGCCCATCCAAATGTCCATCTAGAATAGAGTACCCTCCCCATT
ATTGACTTTGTTCACTGCCTCCACTGAAAAAAGTGTTTTACTTTGTGTAAAGCTTTCTAG
AATTGCGATACTTTTTTGTTCTTGGAGAGAAAGAAGTTGTTATCTGGCATATATTTGGCT
TTGAGAATTTTGTACCAAGTTTCTTCAGAGCCTTGAGATATTCTCCAGATCTATTTAACA
AGCAGACATTCATTCATGATTAAGGTATCAACGATTCCCAGACCACCTTGGTCCCATGGC
CTAGTAATCAAATCCCATTTAGCCATATGGTAACTGTTTCTACCCTCAGCCCCTTGCCAA
AAAAAAATGGACCAGAAAGAATTCATTTTCTGGTGAAGTTCTATGGGAAAAGATAGAAAC
CCATTGTGTAAGTGGGTAGGCTGCTTAAACAGGAGTTGGTCAAAGTGAGCCTCCCCCTGA
GGACAAATGTTTACCCTTCCATCGGTCTAGCCTTTTTTCCATGATGTACTTAAACGCTGA
GGTTTTTAACCAACAATCTGAAATTGGGATACCTGGATACTTCATGGGGAGAGCTCCCAG
CGAACAATTGAGCATATTTGCCATCCTTTCTTGTTCATGTTGAGCAAACCCAAAGACGTA
CACTTCACTTTTGTGAAAGTTTATCCTCAGCCCTGACATCCATTAGAAGCAATAGAGGAT
AAGTTTCAGGTTAAGAATGGACCTATCAGAGCCATCAATCATTATCACCGTGTCATCAGC
GTACTGGATGTGGGAACTGGGAAATGCCCCCTGGAATGAGATCTCCTAACACCCCGGCGA
TATGCCCTTTGGCCACCCCCTCCTCTAACAACACACTGAGATTCTTGGATGTCATGACCT
CCTCTAGGAAATCCCACCTGACTTTGTCCTAAGCTTTTTCAAAATCGATTTTCAACAACA
GACTCTTCTTTTTTTTAGATTTCAACTCGTGCACAACTTCGTGCAAGATGACGACCCCTT
CTAAAATGTTTCAGTTTTTCAAGAAGCCAGTCTGGTTCCCTCCGATGAGCCCCTTGGGCA
CCGCAGAAAGCCTATTTGTGAGCACTTTAGTGAATATTTTGAAGTCTGCATTTAGAAGGC
AAATGGGCCGGTATTGTTTGATGCTACTGGCATCCCTGATCTTGGGGATGAGCATGATTA
CTCCGAAGTTCAACCGTTGCATGTCTACTTCTGCTTCGTGGAAATCCTTGAACATCTTAT
AAATGTCCTCTTTAATGATATGCCAAAAGTTTTTGAAGAAATCACCTCCAAATCCATTTG
GACCTGGTGCTGCGTCAACTTCCAAATTTTCAATGACTTGAAAGATCTCTTCTTTAAAGG
GTTTTGCAAGGGAGTTCAAATCCTCAATGCTAAGCCTCGGCCGCCTGTTCCAGAAATTTT
CCTTTAACTTCATGTTACAAGAGGCGTTCGGACCAAACAAAAGTTTGTAAATAACTGCAT
TTATTTGTTTTACTGACCTTTTCTTTTGAGTATTTACTCAAACAACGCATGTCTGCAGAA
CTTCTCCTCAAGGATGGCAGCTATTGACTACAGTGTCTGTGTTCATAGTGAGGTTTTTGT
GACCACACAAGGTGGAAATTTTCCTCATTTTCTTATTGGGCATAGAAGATACTTGTATGG
TGGCCATGCGAAGACAATTAAGCCCGATAAAAGAAGATTGGCTATACTCTTTGATAGTCC
ACGTATTGGATGGAAGTCACTGAAACGTCAATTGTTCAATATGAGAGCACATAGTGACGT
GAAGGGTATTGAAATAAAAAGAGCAAATGAATCTGTATACACCTTTCCATGCCCTGATTG
CATGTGCCGTTCAAACAAATGAGAAACTCCAAATCCATCATGGCCAGATAGCATCTAAAA
GTTGTATCTTGACTCACTGACCCCATTTCTTTCTCAGTGTCACGGCATACCCACCCACTC
CTTAATCTTCATATGCAGTGTGGTGGTGAGATGTTCCATGTCCTCTAAGCATCCCGACTG
AGATATATTGAATCTTTACATTTAACCCTGGCACTAACAATACACTGATCCATGTCTAGA
ATGTATGTAACCATATCTAGGGCTATTCCTTAACAGCCAGTGTTAATCTGTTTGTGTAGT
ACTAAGATCCCTTGTCCTCCTTGTACATTGATGAACCATGAAGAAATTGTCATACACAAT
TTTGTAGCAAGACGAATATTGTTTATTTTGCCTTTTTTTTACTAATTTCTCAAGTATACT
ATC