Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042908_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:3:183667440:183674178:1 gene:Zm00001d042908 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease II chloroplastic/mitochondrial
Sequence

ATGTCTTCGATAAAGCCCCAGCAGGTTACATATGTTGTACCTGGTATCATGAATTTTGAC
TATTCAAAAATAGACGAATTTCTTGAGAAAACGCAAAATCTTTTGGACCCAACTATTTTA
GAATGTGCTTGGATGGAGCTGTCTGAGAAGGATAAATCAATAACAGTTGAGGAATTTGCA
GAGATAGTGTATGGTACCAAGGAGTCTTTGGAAAGCTACTGTGCACATCTCTTGTTGTCA
AGGGATGTAGTGTATTTTGTCAAGGTAGAGAGCAGAGATTATTCCATGTACCAACCTCGT
TCACCTGCTCAGGTAGAGGAACTCCTACGACGGAAGCTTGCTAAAGAGGCCGCTGATAAG
GAACTGGAAGAATTTGTCCATTTACTCAAGTCTGCCAAAGCATTGCCTATGGAGTCCAAG
CCTCCTAAAGCGTCATGGTTGGTGGAAGAAAAAGTCAGGCAAAAAATCGAGTCTCTTCAA
GCATATGCAGTTGATGCATGTGATGATGAACAAAGAAGACTAGCAGGAAATATTCTCAAA
GCTATGGGATTCACGAGGACATCATCAGCTGCTCTAAAGCTTCTTATAAATGTTGGATAC
TTCCCTGTGCATGTCAATCTCGACCTTTTCAGGTACGATGTCCGTATAAGGTACACAGAT
GAAGTTTTGTCAGCTGCAGAGGAGCTTCTGGTGGACAGCCCTGACACAGACATGCATATC
AGGAAGGATCTTTCAACTTTGAAAGTGTACGCCATTGATGTAGATGAGGCTGATGAACTT
GATGACGCATTGAGCGCAACCAGGCTTCCTGATGGTAGAATAAAGGTCTGGATACATGTT
GCTGACCCAACATGCTTGGTCAAACCTCATAGCATCATTGATAGGGAGGCAATGCACAGA
GGAACATCAATCTTTCTACCAACCACTACTTTTCCGATGTTCCCAGAGAGGCTTGCCATG
AATTCTATGAGCTTGCAGCAGGGTAAAGAATGCAAATCTGTAACTGTATCTGTTATTTTA
AACCTAGACGGGAGTATTGCAGAATATACTTTAGAAAATTCAGTCATCAAACCTACTTAT
ATGTTGACATATGAGAGTGCAACTGAATTGCTTTACATGAACCTGGAAGAAGAGGAAGAA
CTAAGGATTCTTCAAGAAGCTGCTAGGATTCGTGAACAGTGGCGTCGTAGCCAGGGTTCA
ATAGACACTGCGATGATAGAGCCACGTATAAAGGTGTCAAATCCTGATGATCCTGAACCA
AATATCAATCTATATGTTGAAGATCAAGCCAATCCAGCAATGCAGCTTGTATCTGAAATG
ATGATACTTTGCGGTGAGGCAGTGGCTGCTTTCGGTTTTGACAACAACCTCCCTTTGCCA
TATAGAGGTCACCCCCAGTCCAACACAGCAGTGTCAGTGTTCTCTCATCTACCTGAGGGG
CCTGCAAGGAGCTTTGCCAATATCAGCGTGCTCCGTGCTGCAGAAATGGATTTTCAAAAA
CCTGTACCACATGGTGTACTTGGTATTCCTGGTTACGTGCAGTTCACCTCTCCTATCCGA
AGATATGTTGACCTGCTAGCTCATTATCAGGTTAAAGCTTTTCTTAGAGGTGACTCTCCA
CCATATTCAGCTGGCGATCTAGAAGGAATGACATTTATTGCGAGCATGCATGTTAAAGTA
GCTAGGAGGCTTCATAGCAATAGCTTACGGTACTGGCTGTTGGAATACTTGAGGCGACAA
CCAAAGGGGAGAAAGTACAGAGCACTGATTCTGAAGTTTGTCAAGGATCGTATGGGAGCT
CTGCTTTTGGTGGAGGTTGGGATGCAAGTTACAACGACAATTTCACGTGGGAAAGTGGGA
GATCAAGTCAGTGTTACTGTGGAAACAGCTCATCCACGTGATGATATATTATCAGTCAGA
GAGGTTGTAGAGGACACCAAGGATTCTGAGTAA

Peptide Sequence

PEP ID

Zm00001d042908_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:3:183667440:183674178:1 gene:Zm00001d042908 transcript:Zm00001d042908_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease II chloroplastic/mitochondrial
Sequence

MSSIKPQQVTYVVPGIMNFDYSKIDEFLEKTQNLLDPTILECAWMELSEKDKSITVEEFA
EIVYGTKESLESYCAHLLLSRDVVYFVKVESRDYSMYQPRSPAQVEELLRRKLAKEAADK
ELEEFVHLLKSAKALPMESKPPKASWLVEEKVRQKIESLQAYAVDACDDEQRRLAGNILK
AMGFTRTSSAALKLLINVGYFPVHVNLDLFRYDVRIRYTDEVLSAAEELLVDSPDTDMHI
RKDLSTLKVYAIDVDEADELDDALSATRLPDGRIKVWIHVADPTCLVKPHSIIDREAMHR
GTSIFLPTTTFPMFPERLAMNSMSLQQGKECKSVTVSVILNLDGSIAEYTLENSVIKPTY
MLTYESATELLYMNLEEEEELRILQEAARIREQWRRSQGSIDTAMIEPRIKVSNPDDPEP
NINLYVEDQANPAMQLVSEMMILCGEAVAAFGFDNNLPLPYRGHPQSNTAVSVFSHLPEG
PARSFANISVLRAAEMDFQKPVPHGVLGIPGYVQFTSPIRRYVDLLAHYQVKAFLRGDSP
PYSAGDLEGMTFIASMHVKVARRLHSNSLRYWLLEYLRRQPKGRKYRALILKFVKDRMGA
LLLVEVGMQVTTTISRGKVGDQVSVTVETAHPRDDILSVREVVEDTKDSE

Transcript Sequence

Transcript ID

Zm00001d042908_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:183667440:183674178:1 gene:Zm00001d042908 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease II chloroplastic/mitochondrial
Sequence

AGGAGCTCAGCTCGTCGTATCTTATCTATCGCCATTCGCCAGCCAAAACCCCACCCGAGA
GGCGGAGACTGCGTTGCGTGGACGGCGGACTAAACCCTACCGCCCTTCGTCTCTGGTCCA
TGATGGGGCCCTCGACCATGGCGGCGCGGGCAGCGGGCTGCTGCTCCTCGGCGGCGCTCG
CCTTCTTCCGTCTCCACCCCCTCCGATGCGCCGTCCGCCCGGCCGCCGCTCTCGTTGGAG
GGTGCTCCTCTGGCCTCCGCGGCGGCTGCCGGAGCCGCCTGGCGCATAGCATCGTGGACT
TGGTTATGGAGGAGCTCCGCTCCCGCCGGCGCGTCCGGGTCTCGGCGAAGATAGGATTGC
AGGGCACGAAGGAATTGCCTGACAATAAGATAGTCAAGAGAACATTACAGAAAGGATTGC
TGCTTGAATTTCAGAAAGATCCTGAGAGATCTTTGCTTGCTGTAGTTGAAAGGCCTGATG
GAAAGAAAAACTGGATGGTGACTGATCAGGTCGTTTTTGAACGGATAGCTATTGCTTGTC
CAGTTGACTATCCAGTTTAGTTAATTTATACCTGAACATACATATATTGTTGTTATGGGT
TCTCTGGTGACATGACTTTTACTTTTGTATAGAATGGTGTCATGTCTTCGATAAAGCCCC
AGCAGGTTACATATGTTGTACCTGGTATCATGAATTTTGACTATTCAAAAATAGACGAAT
TTCTTGAGAAAACGCAAAATCTTTTGGACCCAACTATTTTAGAATGTGCTTGGATGGAGC
TGTCTGAGAAGGATAAATCAATAACAGTTGAGGAATTTGCAGAGATAGTGTATGGTACCA
AGGAGTCTTTGGAAAGCTACTGTGCACATCTCTTGTTGTCAAGGGATGTAGTGTATTTTG
TCAAGGTAGAGAGCAGAGATTATTCCATGTACCAACCTCGTTCACCTGCTCAGGTAGAGG
AACTCCTACGACGGAAGCTTGCTAAAGAGGCCGCTGATAAGGAACTGGAAGAATTTGTCC
ATTTACTCAAGTCTGCCAAAGCATTGCCTATGGAGTCCAAGCCTCCTAAAGCGTCATGGT
TGGTGGAAGAAAAAGTCAGGCAAAAAATCGAGTCTCTTCAAGCATATGCAGTTGATGCAT
GTGATGATGAACAAAGAAGACTAGCAGGAAATATTCTCAAAGCTATGGGATTCACGAGGA
CATCATCAGCTGCTCTAAAGCTTCTTATAAATGTTGGATACTTCCCTGTGCATGTCAATC
TCGACCTTTTCAGGTACGATGTCCGTATAAGGTACACAGATGAAGTTTTGTCAGCTGCAG
AGGAGCTTCTGGTGGACAGCCCTGACACAGACATGCATATCAGGAAGGATCTTTCAACTT
TGAAAGTGTACGCCATTGATGTAGATGAGGCTGATGAACTTGATGACGCATTGAGCGCAA
CCAGGCTTCCTGATGGTAGAATAAAGGTCTGGATACATGTTGCTGACCCAACATGCTTGG
TCAAACCTCATAGCATCATTGATAGGGAGGCAATGCACAGAGGAACATCAATCTTTCTAC
CAACCACTACTTTTCCGATGTTCCCAGAGAGGCTTGCCATGAATTCTATGAGCTTGCAGC
AGGGTAAAGAATGCAAATCTGTAACTGTATCTGTTATTTTAAACCTAGACGGGAGTATTG
CAGAATATACTTTAGAAAATTCAGTCATCAAACCTACTTATATGTTGACATATGAGAGTG
CAACTGAATTGCTTTACATGAACCTGGAAGAAGAGGAAGAACTAAGGATTCTTCAAGAAG
CTGCTAGGATTCGTGAACAGTGGCGTCGTAGCCAGGGTTCAATAGACACTGCGATGATAG
AGCCACGTATAAAGGTGTCAAATCCTGATGATCCTGAACCAAATATCAATCTATATGTTG
AAGATCAAGCCAATCCAGCAATGCAGCTTGTATCTGAAATGATGATACTTTGCGGTGAGG
CAGTGGCTGCTTTCGGTTTTGACAACAACCTCCCTTTGCCATATAGAGGTCACCCCCAGT
CCAACACAGCAGTGTCAGTGTTCTCTCATCTACCTGAGGGGCCTGCAAGGAGCTTTGCCA
ATATCAGCGTGCTCCGTGCTGCAGAAATGGATTTTCAAAAACCTGTACCACATGGTGTAC
TTGGTATTCCTGGTTACGTGCAGTTCACCTCTCCTATCCGAAGATATGTTGACCTGCTAG
CTCATTATCAGGTTAAAGCTTTTCTTAGAGGTGACTCTCCACCATATTCAGCTGGCGATC
TAGAAGGAATGACATTTATTGCGAGCATGCATGTTAAAGTAGCTAGGAGGCTTCATAGCA
ATAGCTTACGGTACTGGCTGTTGGAATACTTGAGGCGACAACCAAAGGGGAGAAAGTACA
GAGCACTGATTCTGAAGTTTGTCAAGGATCGTATGGGAGCTCTGCTTTTGGTGGAGGTTG
GGATGCAAGTTACAACGACAATTTCACGTGGGAAAGTGGGAGATCAAGTCAGTGTTACTG
TGGAAACAGCTCATCCACGTGATGATATATTATCAGTCAGAGAGGTTGTAGAGGACACCA
AGGATTCTGAGTAAATGCATGTGACGATAGCTTATCAGACAAAGAGGTTATAGAGGACAC
CGAGGATTCTGAGTAAATGCTTGCAAAGCTCACTCGCACTTTGCAGTCTTGTGTTCCTCT
GCCGTTTACTGCTGTTCATTTTTGTGGCAGTGATATAGGCGATTTATTACCTTGGAAAAT
ATCTGCTGATTCTTCAAGTTAGCGACTTGCGTAGCATGGCTACAATACAAATGGTAAAAG
GACTAGGGTATTGGTCTTGGTGCCAAAGCTCATTCCAATTCGAGGACGAAATGATGAAAT
CATAGGTGGTTTTCATTGGTATACAGAATACAGTCCGACAGTTCGTTTCTTCCGAGGTAG
GTTCTCTTTGTGCCGAACAAGGTTCCAAGTGCTGATAACTGGGAATTTTGTATAGCTGAA
CACGCATGCAACATTTTTGTACCTGAATTTGGTACCTCTGACGTTGTCGGCACATTCTGC
TATATTTGAACACTGAGGTGGATGATCGATGTACAGAATAATAATAATTCCAATATCATT
T