Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042905_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:183568010:183570847:1 gene:Zm00001d042905 gene_biotype:protein_coding transcript_biotype:protein_coding description:Laccase-17
Sequence

ATGGCTACCCCCTACCGTCTTCCTTGCTGCTGCTATGCCCTCGTCACTGTGCTCGTGCTC
TTCTTCTCCGTCGACGCTACGGAGGGCGCCATCAGGGAGTACCAGTTCGATGTGCAAATG
ACCAATGTGACGCGGCTGTGCAGCAGCAAGAGCATCGTGACGGTGAACGGCCAGTTCCCG
GGGCCGACGGTGTTCGCGAGGGAGGGCGACTTCGTCGTCATCCGCGTCGTCAACCACGTC
CCCTACAACATGAGCATCCACTGGCACGGCATCCGGCAGCTGCGGAGCGGGTGGGCGGAC
GGGCCGGCGTACATCACGCAGTGCCCGATCCAGAGCGGCCAGAGCTACGTGTACAAGTTC
ACCATCACGGGGCAGCGCGGCACGCTGTGGTGGCACGCGCACATCTCCTGGCTGCGCGCC
ACCGTCTACGGGCCCATCGTCATCCTGCCCAAGCCCGGCGTCCCTTACCCGTTCCCGGCG
CCCTACGACGAAGTCCCCGTCTTGTTCGGGGAGTGGTGGACGGCGGACACGGAGGCGGTG
ATCAGCCAGGCGCTCCAGACCGGCGGAGGCCCCAACGTCTCCGACGCCTTCACCATCAAC
GGGCTGCCTGGGCCGCTCTACAACTGCTCTGCAAAAGACACGTTCAAGCTGAAAGTGAAG
CCCGGGAAGACGTACATGCTCCGCATCATCAACGCTGCGCTCAATGACGAGCTCTTCTTC
TCCATCGCCGGCCACCCGCTCACCGTCGTTGACGTCGACGCGGTCTACATCAAGCCCATC
ACCGTGGAGACCATCATTATCACCCCTGGGCAGACCACCAACGTGCTCCTCACCACCAAG
CCGTCCTACCCCGGCGCCACCTACTACATGCTGGCCGCGCCCTACTCCACCGCCAGGCCG
GGCACCTTCGACAACACCACCGTCGCCGGCATCCTCGAGTACGAGGACCCCACGTCGTCC
CCTCCCCCGCACGCGGCCTTCGACAAGAACCTCCCGGCGCTGAAGCCGACCCTGCCGCAG
ATCAACGACACGAGCTTCGTCGCCAACTACACGGCCAGGCTCCGCAGCCTGGCCACCGCG
GAGTACCCGGCCGACGTGCCGCGGGAGGTGCACAGGCGGTTCTTCTTCACGGTCGGGCTG
GGCACCCACCCGTGCGCCGTGAACGGGACGTGCCAGGGCCCCACCAACAGCAGCCGGTTC
GCGGCGTCCGTGAACAACGTCTCCTTCGTGCTCCCCACCACGGCGCTGCTGCAGTCGCAC
TTCGCCGGCAAGTCCAGGGGGGTGTACTCGTCCAACTTCCCGGCCGCGCCGCTGGTCCCG
TTCAACTACACGGGGACGCCGCCCAACAACACCAACGTGTCCAACGGCACCAAGCTGGTG
GTGCTGCCGTACGGCACCAGCGTGGAGCTGGTGATGCAGGGCACCAGCATCCTCGGCGCC
GAGAGCCACCCGCTGCACCTCCACGGCTTCAACTTCTTCGTCGTCGGCCAAGGGTTCGGC
AACTTCGACCCCGCCAAGGACCCGGCCAAGTACAACCTCGTCGACCCCGTCGAGCGTAAC
ACCGTCGGCGTGCCGGCGGCCGGGTGGGTGGCCATCCGGTTCCGCGCAGACAATCCAGGT
GAGACTTTGGGTGTGGTTCATGCATTGCCACTTGGAAGTTCACGTCAGCTGGGGCCTGAA
AATGGCATGGCTGGTGCTGGACGGAGAACGCCCCAACGAGAAGCTGCTGCCTCCGCCATC
GGATCTGCCCACATGTTAGACGACACGAGGAATTGCTGGCCTAGTCGTCGCCATCAACGG
CCGTGA

Peptide Sequence

PEP ID

Zm00001d042905_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:183568010:183570847:1 gene:Zm00001d042905 transcript:Zm00001d042905_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Laccase-17
Sequence

MATPYRLPCCCYALVTVLVLFFSVDATEGAIREYQFDVQMTNVTRLCSSKSIVTVNGQFP
GPTVFAREGDFVVIRVVNHVPYNMSIHWHGIRQLRSGWADGPAYITQCPIQSGQSYVYKF
TITGQRGTLWWHAHISWLRATVYGPIVILPKPGVPYPFPAPYDEVPVLFGEWWTADTEAV
ISQALQTGGGPNVSDAFTINGLPGPLYNCSAKDTFKLKVKPGKTYMLRIINAALNDELFF
SIAGHPLTVVDVDAVYIKPITVETIIITPGQTTNVLLTTKPSYPGATYYMLAAPYSTARP
GTFDNTTVAGILEYEDPTSSPPPHAAFDKNLPALKPTLPQINDTSFVANYTARLRSLATA
EYPADVPREVHRRFFFTVGLGTHPCAVNGTCQGPTNSSRFAASVNNVSFVLPTTALLQSH
FAGKSRGVYSSNFPAAPLVPFNYTGTPPNNTNVSNGTKLVVLPYGTSVELVMQGTSILGA
ESHPLHLHGFNFFVVGQGFGNFDPAKDPAKYNLVDPVERNTVGVPAAGWVAIRFRADNPG
ETLGVVHALPLGSSRQLGPENGMAGAGRRTPQREAAASAIGSAHMLDDTRNCWPSRRHQR
P

Transcript Sequence

Transcript ID

Zm00001d042905_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:183568010:183570847:1 gene:Zm00001d042905 gene_biotype:protein_coding transcript_biotype:protein_coding description:Laccase-17
Sequence

ATCGCTACCACTGCACCCCTCAAACCCAGTGACCCAACCCACTACACATCGGAGTCTCGC
GCGCGGGCTCAAGCACTTGTTCTTAGCTGCTTAGCTGCTTTCTTCGTTGTAGGAACTGCA
ACAATGGCTACCCCCTACCGTCTTCCTTGCTGCTGCTATGCCCTCGTCACTGTGCTCGTG
CTCTTCTTCTCCGTCGACGCTACGGAGGGCGCCATCAGGGAGTACCAGTTCGATGTGCAA
ATGACCAATGTGACGCGGCTGTGCAGCAGCAAGAGCATCGTGACGGTGAACGGCCAGTTC
CCGGGGCCGACGGTGTTCGCGAGGGAGGGCGACTTCGTCGTCATCCGCGTCGTCAACCAC
GTCCCCTACAACATGAGCATCCACTGGCACGGCATCCGGCAGCTGCGGAGCGGGTGGGCG
GACGGGCCGGCGTACATCACGCAGTGCCCGATCCAGAGCGGCCAGAGCTACGTGTACAAG
TTCACCATCACGGGGCAGCGCGGCACGCTGTGGTGGCACGCGCACATCTCCTGGCTGCGC
GCCACCGTCTACGGGCCCATCGTCATCCTGCCCAAGCCCGGCGTCCCTTACCCGTTCCCG
GCGCCCTACGACGAAGTCCCCGTCTTGTTCGGGGAGTGGTGGACGGCGGACACGGAGGCG
GTGATCAGCCAGGCGCTCCAGACCGGCGGAGGCCCCAACGTCTCCGACGCCTTCACCATC
AACGGGCTGCCTGGGCCGCTCTACAACTGCTCTGCAAAAGACACGTTCAAGCTGAAAGTG
AAGCCCGGGAAGACGTACATGCTCCGCATCATCAACGCTGCGCTCAATGACGAGCTCTTC
TTCTCCATCGCCGGCCACCCGCTCACCGTCGTTGACGTCGACGCGGTCTACATCAAGCCC
ATCACCGTGGAGACCATCATTATCACCCCTGGGCAGACCACCAACGTGCTCCTCACCACC
AAGCCGTCCTACCCCGGCGCCACCTACTACATGCTGGCCGCGCCCTACTCCACCGCCAGG
CCGGGCACCTTCGACAACACCACCGTCGCCGGCATCCTCGAGTACGAGGACCCCACGTCG
TCCCCTCCCCCGCACGCGGCCTTCGACAAGAACCTCCCGGCGCTGAAGCCGACCCTGCCG
CAGATCAACGACACGAGCTTCGTCGCCAACTACACGGCCAGGCTCCGCAGCCTGGCCACC
GCGGAGTACCCGGCCGACGTGCCGCGGGAGGTGCACAGGCGGTTCTTCTTCACGGTCGGG
CTGGGCACCCACCCGTGCGCCGTGAACGGGACGTGCCAGGGCCCCACCAACAGCAGCCGG
TTCGCGGCGTCCGTGAACAACGTCTCCTTCGTGCTCCCCACCACGGCGCTGCTGCAGTCG
CACTTCGCCGGCAAGTCCAGGGGGGTGTACTCGTCCAACTTCCCGGCCGCGCCGCTGGTC
CCGTTCAACTACACGGGGACGCCGCCCAACAACACCAACGTGTCCAACGGCACCAAGCTG
GTGGTGCTGCCGTACGGCACCAGCGTGGAGCTGGTGATGCAGGGCACCAGCATCCTCGGC
GCCGAGAGCCACCCGCTGCACCTCCACGGCTTCAACTTCTTCGTCGTCGGCCAAGGGTTC
GGCAACTTCGACCCCGCCAAGGACCCGGCCAAGTACAACCTCGTCGACCCCGTCGAGCGT
AACACCGTCGGCGTGCCGGCGGCCGGGTGGGTGGCCATCCGGTTCCGCGCAGACAATCCA
GGTGAGACTTTGGGTGTGGTTCATGCATTGCCACTTGGAAGTTCACGTCAGCTGGGGCCT
GAAAATGGCATGGCTGGTGCTGGACGGAGAACGCCCCAACGAGAAGCTGCTGCCTCCGCC
ATCGGATCTGCCCACATGTTAGACGACACGAGGAATTGCTGGCCTAGTCGTCGCCATCAA
CGGCCGTGATTGATCGGCCCGGACCATCTTGGAACAGGGATTGCGTGCTCTCTAATTTGC
ACAGGATATCTTACCGTCTTTTGCTTGTGCTGGGGTTGGTGTTATGCTTCCATTTAGTGG
TGTGCTTTTTCCGGCTTGAGTCGTCGTCTGGTTAGCTGTGTGAGAGACACGGGCAGGAAG
GTCCGCTGATGCTACTAGACAGACGCCATTTATTTTTTTGATTACTTATGAGTTACTACC
ATCTTTTGTACTGCCTCGGTCCTAAAATAATTGACATTCTTGTTTTTAAAAAGTCAAACA