Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042884_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:3:182846767:182851933:-1 gene:Zm00001d042884 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acyl-coenzyme A oxidase
Sequence	ATGGACCTCACCTCGCCGTCGCCCGCGGCGCGCCGCGCCGCCGCCATCGCGCGCCACCTC GCCGCGGCCGCCGCCCCCATCCCGGCGAGCAGCCCCCTGGAACCTTCCTGCTGCCTCAGC TACGTCCCGCCGGAGTCCACGGAGCGGCCGGCGGCGTTTGCGCCGGCCGACCTCAGGCTT CTGCTGGACGGGCACGACCTGCCCACGCGGGACTGGCTCTTCCGCGCCATGGAGGAGAGC CCCCTTTTCCGCAGCCGGAGTTCGCGGACGGGATCCAGGGTGTTCGTGGCGCCGGACTTC AACGACGGCAAGGAAGGGCAGCGGGAGGCCACCATGCGGCGGATCGCGTACCTGAATCGG CGCGGCGTGTTCCGCGGGTGGCTCACCGAGGACGGCGCTGCCGCCGAGCTCCGCAAACTA GCGCTCCTCGACTGCATCGCCATCTATGACCACTCTCTCGCCATCAAGATTGGCGTCCAC TTCTTCCTCTGGGGCAGTGCCATCAAGTTTCTTGGAACAAAGCGCCACCATGACAAGTGG TTGGTTGCCACGGAAAATTATGATATCAAGGGTTGTTTTGCAATGACAGAACTAGGCCAT GGAAGCAATGTGCGAGGAATAGAAACAATAGCAACTTATGATTCAGAAACAAGAGAGTTC ATCATAAATACTCCATGTGAATCAGCTCAGAAGTACTGGATTGGTGGAGCTGCCAATCAT GCAACACATACAATAGTCTTTTGTCAACTTCATATAAATGGGAGAAATGAAGGAGTTCAT GCTTTTGTAGCTCAAATTAGGGATGAAGATGGAACTGTGTTGCCTAATATCCATATAGCT GACTGTGGCCATAAGATTGGACTGAATGGCGTTGATAATGGGCGGATTTGGTTTCAGAAT ATACGTGTTCCTCGTGAGAACTTGCTTAATTTGGTTGCTGATGTTTTGCCAGATGGGCGA TATGTTAGCATGATAGATAATCCAGATCAGAGGTTTGCAGCTTTCCTATCTCCGCTTACA CTTGGTCGAGTAAACATTGCAGTTAACTCAGTCTACATTTCAAAGGTCAGCCTAGCAATT GCTGTGAGATACAGTTTGTCAAGGAGAGCCTTTTCAATTGCACCAGATGCCCCTGAAATG TTGTTGCTTGACTATCCCAGTCACCAGCGACGCCTTCTACCACTTCTAGCAAAAGTATGT CTGATGAGCAGTGCTGGCAATTTTATGAAAAATATGTATGTAAAGAGAACTCCTGAAATG AGCAAAGACATACACATTTACTCTAGTGCTCTGAAGGCGACACTAACTTGGCAGAATATG ATTACGATTCAGGAGTGTCGCGAGGCCTGTGGAGGTCAAGGTCTAAAGACTGAGAACCGC ATAGGAATTTTCAAATCTGAATTTGATGTCCAGTCCACATTTGAGGGTGATAACAATGTG CTAATGCAGCAGGTAAGCAAAGCGCTTTATGCTGAATTTTTGGGTGCACAAAAGAAGCAG CAGCCATTCAAGGGATTGGGTTTGGAACACTTAAATGGCTCGAGCCCTGTTATTCCTGAT AAGCTGACAAGTAGCATATTAAGGAGCTCCAAGTTCCAGATGGACCTGTTCTGCTTAAGG GAGAGAGATTTACTGAAGCAGTTTGTAGAGGAGGTTTCTCTCCATCTTGCACAAGGCGAA AGCAGAGAAAAGGCTTTGATGCTGAGTTATCAAGTTGCTGAAGACTTGGCTAGAGCGTTT ACTGAGCGTACGATCCTCCAAATATTTTTGGAGGATGAGATGAATGTTCCTTCTGGTTCC CTAAAGGAGGTACTGGGCTTGCTGAGATCTCTATATGTCATGGTGAACATAGATGAATCC ACATCTTTTCTAAGATACGGGCATTTATCACGTGACAATGTAGCCCTTGTGCGGAAAGAA GTCCTGAAACTGTGCAGTGAACTCAGGCCCCATGCGCTTGCTGTTGTTAGTTCTTTCGGA ATCCCTGATGCCTTCCTTAGTCCACTTGCTTTTGACTGGATTGAGGCAAATGCACTGTCA ACCGGGAGCCACTGA

Peptide Sequence

PEP ID	Zm00001d042884_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:3:182846767:182851933:-1 gene:Zm00001d042884 transcript:Zm00001d042884_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acyl-coenzyme A oxidase
Sequence	MDLTSPSPAARRAAAIARHLAAAAAPIPASSPLEPSCCLSYVPPESTERPAAFAPADLRL LLDGHDLPTRDWLFRAMEESPLFRSRSSRTGSRVFVAPDFNDGKEGQREATMRRIAYLNR RGVFRGWLTEDGAAAELRKLALLDCIAIYDHSLAIKIGVHFFLWGSAIKFLGTKRHHDKW LVATENYDIKGCFAMTELGHGSNVRGIETIATYDSETREFIINTPCESAQKYWIGGAANH ATHTIVFCQLHINGRNEGVHAFVAQIRDEDGTVLPNIHIADCGHKIGLNGVDNGRIWFQN IRVPRENLLNLVADVLPDGRYVSMIDNPDQRFAAFLSPLTLGRVNIAVNSVYISKVSLAI AVRYSLSRRAFSIAPDAPEMLLLDYPSHQRRLLPLLAKVCLMSSAGNFMKNMYVKRTPEM SKDIHIYSSALKATLTWQNMITIQECREACGGQGLKTENRIGIFKSEFDVQSTFEGDNNV LMQQVSKALYAEFLGAQKKQQPFKGLGLEHLNGSSPVIPDKLTSSILRSSKFQMDLFCLR ERDLLKQFVEEVSLHLAQGESREKALMLSYQVAEDLARAFTERTILQIFLEDEMNVPSGS LKEVLGLLRSLYVMVNIDESTSFLRYGHLSRDNVALVRKEVLKLCSELRPHALAVVSSFG IPDAFLSPLAFDWIEANALSTGSH

Transcript Sequence

Transcript ID	Zm00001d042884_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:182846767:182851933:-1 gene:Zm00001d042884 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acyl-coenzyme A oxidase
Sequence	TCTTCTGACACCCGACTTGGATTGTCTCGTTCGTCTTCGTCATCGTCACTCAACAACTCG TCTCATCGCGCCGCATCGTTTACCTCAAGGTTGTTTTGTTGCTTCCTTGTCCCGCTCTCA CCAGCAATCCCGTCGATCACCCAGACCTCCACGGCACTGCTCCGTCTCCTCCGTTCCGTT CCGAACCGCAAGCTCCCAACCCTTCCGCGATGGACCTCACCTCGCCGTCGCCCGCGGCGC GCCGCGCCGCCGCCATCGCGCGCCACCTCGCCGCGGCCGCCGCCCCCATCCCGGCGAGCA GCCCCCTGGAACCTTCCTGCTGCCTCAGCTACGTCCCGCCGGAGTCCACGGAGCGGCCGG CGGCGTTTGCGCCGGCCGACCTCAGGCTTCTGCTGGACGGGCACGACCTGCCCACGCGGG ACTGGCTCTTCCGCGCCATGGAGGAGAGCCCCCTTTTCCGCAGCCGGAGTTCGCGGACGG GATCCAGGGTGTTCGTGGCGCCGGACTTCAACGACGGCAAGGAAGGGCAGCGGGAGGCCA CCATGCGGCGGATCGCGTACCTGAATCGGCGCGGCGTGTTCCGCGGGTGGCTCACCGAGG ACGGCGCTGCCGCCGAGCTCCGCAAACTAGCGCTCCTCGACTGCATCGCCATCTATGACC ACTCTCTCGCCATCAAGATTGGCGTCCACTTCTTCCTCTGGGGCAGTGCCATCAAGTTTC TTGGAACAAAGCGCCACCATGACAAGTGGTTGGTTGCCACGGAAAATTATGATATCAAGG GTTGTTTTGCAATGACAGAACTAGGCCATGGAAGCAATGTGCGAGGAATAGAAACAATAG CAACTTATGATTCAGAAACAAGAGAGTTCATCATAAATACTCCATGTGAATCAGCTCAGA AGTACTGGATTGGTGGAGCTGCCAATCATGCAACACATACAATAGTCTTTTGTCAACTTC ATATAAATGGGAGAAATGAAGGAGTTCATGCTTTTGTAGCTCAAATTAGGGATGAAGATG GAACTGTGTTGCCTAATATCCATATAGCTGACTGTGGCCATAAGATTGGACTGAATGGCG TTGATAATGGGCGGATTTGGTTTCAGAATATACGTGTTCCTCGTGAGAACTTGCTTAATT TGGTTGCTGATGTTTTGCCAGATGGGCGATATGTTAGCATGATAGATAATCCAGATCAGA GGTTTGCAGCTTTCCTATCTCCGCTTACACTTGGTCGAGTAAACATTGCAGTTAACTCAG TCTACATTTCAAAGGTCAGCCTAGCAATTGCTGTGAGATACAGTTTGTCAAGGAGAGCCT TTTCAATTGCACCAGATGCCCCTGAAATGTTGTTGCTTGACTATCCCAGTCACCAGCGAC GCCTTCTACCACTTCTAGCAAAAGTATGTCTGATGAGCAGTGCTGGCAATTTTATGAAAA ATATGTATGTAAAGAGAACTCCTGAAATGAGCAAAGACATACACATTTACTCTAGTGCTC TGAAGGCGACACTAACTTGGCAGAATATGATTACGATTCAGGAGTGTCGCGAGGCCTGTG GAGGTCAAGGTCTAAAGACTGAGAACCGCATAGGAATTTTCAAATCTGAATTTGATGTCC AGTCCACATTTGAGGGTGATAACAATGTGCTAATGCAGCAGGTAAGCAAAGCGCTTTATG CTGAATTTTTGGGTGCACAAAAGAAGCAGCAGCCATTCAAGGGATTGGGTTTGGAACACT TAAATGGCTCGAGCCCTGTTATTCCTGATAAGCTGACAAGTAGCATATTAAGGAGCTCCA AGTTCCAGATGGACCTGTTCTGCTTAAGGGAGAGAGATTTACTGAAGCAGTTTGTAGAGG AGGTTTCTCTCCATCTTGCACAAGGCGAAAGCAGAGAAAAGGCTTTGATGCTGAGTTATC AAGTTGCTGAAGACTTGGCTAGAGCGTTTACTGAGCGTACGATCCTCCAAATATTTTTGG AGGATGAGATGAATGTTCCTTCTGGTTCCCTAAAGGAGGTACTGGGCTTGCTGAGATCTC TATATGTCATGGTGAACATAGATGAATCCACATCTTTTCTAAGATACGGGCATTTATCAC GTGACAATGTAGCCCTTGTGCGGAAAGAAGTCCTGAAACTGTGCAGTGAACTCAGGCCCC ATGCGCTTGCTGTTGTTAGTTCTTTCGGAATCCCTGATGCCTTCCTTAGTCCACTTGCTT TTGACTGGATTGAGGCAAATGCACTGTCAACCGGGAGCCACTGATCTCAGGTTTCCACAT ACGAGCCAGGTTATCCTGTGAAAGTACTGAATATTGATGGCGGGGCATAGATACCGTATA ACTACAGGAGCACTTGTTGTCTCGGAACAAATTGTTGTGAATCCTGTTTTGTATAATAGT TTTCTTGAATATAAGCGAACGTAGCCTAACAGGCCAAAGTCCATGTAATGGGGTTTACAA CAGTAATAACTTGCAGAGTGATGTAAGCGAGTTGTTGAGCAGTAAATAAAATACTCTTGT C