Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042872_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:182589306:182591372:1 gene:Zm00001d042872 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 14

Sequence

ATGACGGAAGTGGCGGGACGCCCCGGGACGTCGGGCGGCCTGGCGCTGCGGGCGGGCCAG
TTCGTCTTCGCCGCCGCGTCCATCTGCGCCATGGCCTCCGCGCCCGGGTTCACCAACTAC
ACAGCCTTCTGCTACTTGGTTGCATCTATGGGACTACAAGCACTATGGAGCTTGGGGCTT
GGATGTCTTGATTACTATGCCTTGACATTGAGAAGAGATCTTCAGCAAGCTCTTCTCATG
AGCTTATTTGTTGTTGGCGATTGTGTGACAGCAATTCTTTCGTTTGCTGCTGCATGCTCA
GCTGCAGGCGTAGTTGTGCTTTTCGAAAGGGATGCGTACTTGTGCAGAAGGGATCCTCAA
CTCCCTTGTGGAAGATTCGAGGTTGCTGCTGCATTTGCATTTCTTTGCTGGACGTTTAGT
GCTGCATCCGCTCTGGTAATGTCTTGGCTGCTTGCCTCCTTGTGA

Peptide Sequence

PEP ID

Zm00001d042872_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:182589306:182591372:1 gene:Zm00001d042872 transcript:Zm00001d042872_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 14

Sequence

MTEVAGRPGTSGGLALRAGQFVFAAASICAMASAPGFTNYTAFCYLVASMGLQALWSLGL
GCLDYYALTLRRDLQQALLMSLFVVGDCVTAILSFAAACSAAGVVVLFERDAYLCRRDPQ
LPCGRFEVAAAFAFLCWTFSAASALVMSWLLASL

Transcript Sequence

Transcript ID

Zm00001d042872_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:182589306:182591372:1 gene:Zm00001d042872 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 14

Sequence

ACGAGCAGTTCACTACCCATCCGCCATAGTCCGAAAGTTACCAAATCCTCCTGCGAGGCC
CCAGCACCGAATGCCCCAGCACAACAAGGCGGCGTCGTTTGAGAGGAAGCGGCTAGAGGA
CCTGCTGCCGGGCTAGATGACGGAAGTGGCGGGACGCCCCGGGACGTCGGGCGGCCTGGC
GCTGCGGGCGGGCCAGTTCGTCTTCGCCGCCGCGTCCATCTGCGCCATGGCCTCCGCGCC
CGGGTTCACCAACTACACAGCCTTCTGCTACTTGGTTGCATCTATGGGACTACAAGCACT
ATGGAGCTTGGGGCTTGGATGTCTTGATTACTATGCCTTGACATTGAGAAGAGATCTTCA
GCAAGCTCTTCTCATGAGCTTATTTGTTGTTGGCGATTGTGTGACAGCAATTCTTTCGTT
TGCTGCTGCATGCTCAGCTGCAGGCGTAGTTGTGCTTTTCGAAAGGGATGCGTACTTGTG
CAGAAGGGATCCTCAACTCCCTTGTGGAAGATTCGAGGTTGCTGCTGCATTTGCATTTCT
TTGCTGGACGTTTAGTGCTGCATCCGCTCTGGTAATGTCTTGGCTGCTTGCCTCCTTGTG
AATAGTGATCTTGTGTAAGGTGTCTGTAATGCTCTCTTTGTATATCTCGAGCATGCTCTC
TCATTGTACACATGCTCATTTTGTGTGTGGGCAGACCACACGCTAGAAATTGTGTTTGGT
TGGATGTATAAGGAGGGATGGAAATGGGCGGCTATAA