Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042848_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:3:181948769:181952573:-1 gene:Zm00001d042848 gene_biotype:protein_coding transcript_biotype:protein_coding description:Laccase-7
Sequence

ATGGTGCAGCTTTTGCCGGCGCTGGTGGCGCTCGCCCTTCTCCTCGTCAGACCGGTGGCG
GATGCGGCGATGGCTAAATACACGTTCACAGTGGGGAGCATGCAGATCAGTCAGCTGTGC
AGCAGCACCAGCATTATTGCGGTGAACGGGCAGCTGCCGGGCCCGTCGATAGAAGTGAAC
GAAGGCGACGATGTCGTCGTCAAGGTCGTCAACAACTCGCCGTACAACGTGACCATCCAC
TGGCATGGTGTGCTCCAGCTCATGACCCCGTGGGCGGACGGCCCGAGCATGGTGACGCAG
TGCCCCATCCAGCCCAGCAGCTCCTACACGTACCGGTTCAGCGTGCCGGGGCAGGAGGGC
ACGCTGTGGTGGCACGCGCACTCCTCCTTCCTCCGCGCCACGGTGTACGGCGCCTTCATC
ATCCGCCCGAGGCGCGGCAACGCCTACCCTTTCCCGGCGCCGGACAAGGAGGTCCCCATC
GTGCTCGGCGAGTGGTGGAACCGCAATGTAGTCGACGTCGAGAGCGACGCCATCTTGGCC
GGTCAGCTTCCCGCCCAGTCCGACGCGTTCACAGTTAACGGCAAAACCGGCCTGCTGTAC
CAGTGCGCGAACGAGACGTTCACGGCGGTGGTGGAGCCCAGCACGAGGGTGCTCCTCCGG
GTCGTCAACGCCGGCCTCAACTCGCACCTCTTCTTCAAGCTGGCCGGCCACAACTTCACC
GTCGTCGCCGTGGACGCGGGCTACACCTCCAACCTCAACACGGACACGCTCGTGCTCGCG
CCGGGCCAGACCGTGGACGCGCTCGTCACCACCGCCGCCGCGCCCGGGAGCTACTACATG
GCGGTGCTGGCGCACGACACCATGAGCCCGCTCGCGTTCGCGGCGTCGGACACGACCACC
GCCACCGCGATCCTCCAGTACAACGGCACGTCGTCCACCAACCCGCCCGCGATGCCCGCC
ATGCCGTCCAGCTCCGACTCCGGGACGGCCAACGCCTTCTACTTCGGGCTGAGGGGCCTG
GGCGCGCCCGCGGTGCCGGCGCCGGTGGACGTGAGCATGACCATCGAGCTGGGCCTCGGC
CAGCTGCCCTGCGACCCGTCGCAGACCAGGTGCAACGGGACCGCGGCCGCCGCCGCGATG
AACGGCGTCTCGTTCCGCCTCCCGTCCCCCGAGACGTCTCTCCTCGGGGCGCACGTCGAC
GGCGTCGCGGGGGTCTTCACGGCAGATTTCCCGGACGGTCCGCCGCCGAGCGGCACGGCG
ATGTCGGTGGGGACCAAGCTCAAGAAGCTCAGCTACAACTCGGTGGTGGAGATCGTGCTG
CAGAACCCGGCGGCCGTCCCGACGGAGAACCACCCGATCCACCTCCACGGCTTCAACTTC
TTCGTGCTGGCGCAGGGGATGGGTACCTTCGCCCCGGGAAGCGTGGCCTACAACCTGGTG
GACCCGGTGGCCCGCAACACCATCGCCGTGCCTGGCGGTGGCTGGGCTGTCATACGCTTC
GTCGCCAACAATCCAGGCATGTGGTTCTTTCACTGCCACCTGGACCCGCACGTGCCTATG
GGCCTGGGCATGGTGTTCCAGGTGGACAGCGGGACGACGCCCGGCTCCACGCTCCCTACG
CCGCCGGGGGATTGGGTGGGAGTATGCGACGCGCAGCACTACGCGGCCGCGGCGGCGGTA
GCAGCAGCGCCGGTGCCAGTTCCGGCCCCAGCCCCAGTCCCAGCACCAATCCTAGCGCCA
GCACCAGCAGAATCGCCGTTGCCACCTCCGCGCGCGGTGGACCACAAGCCGTCGCCCAAC
CTTCCTCAGCGCAGGGAGCACACGGGTACCTCTAATTCCGCTGCTGGACGGAGAGCTAAG
GGGCACCTCGCTTGTTTCTTGTGTTCTGTCCTCCTTTTCTTTCTTCTTCGTCAACACAAG
GCCTAG

Peptide Sequence

PEP ID

Zm00001d042848_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:3:181948769:181952573:-1 gene:Zm00001d042848 transcript:Zm00001d042848_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Laccase-7
Sequence

MVQLLPALVALALLLVRPVADAAMAKYTFTVGSMQISQLCSSTSIIAVNGQLPGPSIEVN
EGDDVVVKVVNNSPYNVTIHWHGVLQLMTPWADGPSMVTQCPIQPSSSYTYRFSVPGQEG
TLWWHAHSSFLRATVYGAFIIRPRRGNAYPFPAPDKEVPIVLGEWWNRNVVDVESDAILA
GQLPAQSDAFTVNGKTGLLYQCANETFTAVVEPSTRVLLRVVNAGLNSHLFFKLAGHNFT
VVAVDAGYTSNLNTDTLVLAPGQTVDALVTTAAAPGSYYMAVLAHDTMSPLAFAASDTTT
ATAILQYNGTSSTNPPAMPAMPSSSDSGTANAFYFGLRGLGAPAVPAPVDVSMTIELGLG
QLPCDPSQTRCNGTAAAAAMNGVSFRLPSPETSLLGAHVDGVAGVFTADFPDGPPPSGTA
MSVGTKLKKLSYNSVVEIVLQNPAAVPTENHPIHLHGFNFFVLAQGMGTFAPGSVAYNLV
DPVARNTIAVPGGGWAVIRFVANNPGMWFFHCHLDPHVPMGLGMVFQVDSGTTPGSTLPT
PPGDWVGVCDAQHYAAAAAVAAAPVPVPAPAPVPAPILAPAPAESPLPPPRAVDHKPSPN
LPQRREHTGTSNSAAGRRAKGHLACFLCSVLLFFLLRQHKA

Transcript Sequence

Transcript ID

Zm00001d042848_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:181948769:181952573:-1 gene:Zm00001d042848 gene_biotype:protein_coding transcript_biotype:protein_coding description:Laccase-7
Sequence

ACACATGTCGCACGCGCGCACACTGAAATAGCTGTGCCTCTGGCTGCTTCGTCTTCCTCC
CCTTCCTTGTCCTCTGCCTCTGCTGCACTCTGCTCCACCCCCTTTTTTCTTTCCCCCATC
CATGGTGCAGCTTTTGCCGGCGCTGGTGGCGCTCGCCCTTCTCCTCGTCAGACCGGTGGC
GGATGCGGCGATGGCTAAATACACGTTCACAGTGGGGAGCATGCAGATCAGTCAGCTGTG
CAGCAGCACCAGCATTATTGCGGTGAACGGGCAGCTGCCGGGCCCGTCGATAGAAGTGAA
CGAAGGCGACGATGTCGTCGTCAAGGTCGTCAACAACTCGCCGTACAACGTGACCATCCA
CTGGCATGGTGTGCTCCAGCTCATGACCCCGTGGGCGGACGGCCCGAGCATGGTGACGCA
GTGCCCCATCCAGCCCAGCAGCTCCTACACGTACCGGTTCAGCGTGCCGGGGCAGGAGGG
CACGCTGTGGTGGCACGCGCACTCCTCCTTCCTCCGCGCCACGGTGTACGGCGCCTTCAT
CATCCGCCCGAGGCGCGGCAACGCCTACCCTTTCCCGGCGCCGGACAAGGAGGTCCCCAT
CGTGCTCGGCGAGTGGTGGAACCGCAATGTAGTCGACGTCGAGAGCGACGCCATCTTGGC
CGGTCAGCTTCCCGCCCAGTCCGACGCGTTCACAGTTAACGGCAAAACCGGCCTGCTGTA
CCAGTGCGCGAACGAGACGTTCACGGCGGTGGTGGAGCCCAGCACGAGGGTGCTCCTCCG
GGTCGTCAACGCCGGCCTCAACTCGCACCTCTTCTTCAAGCTGGCCGGCCACAACTTCAC
CGTCGTCGCCGTGGACGCGGGCTACACCTCCAACCTCAACACGGACACGCTCGTGCTCGC
GCCGGGCCAGACCGTGGACGCGCTCGTCACCACCGCCGCCGCGCCCGGGAGCTACTACAT
GGCGGTGCTGGCGCACGACACCATGAGCCCGCTCGCGTTCGCGGCGTCGGACACGACCAC
CGCCACCGCGATCCTCCAGTACAACGGCACGTCGTCCACCAACCCGCCCGCGATGCCCGC
CATGCCGTCCAGCTCCGACTCCGGGACGGCCAACGCCTTCTACTTCGGGCTGAGGGGCCT
GGGCGCGCCCGCGGTGCCGGCGCCGGTGGACGTGAGCATGACCATCGAGCTGGGCCTCGG
CCAGCTGCCCTGCGACCCGTCGCAGACCAGGTGCAACGGGACCGCGGCCGCCGCCGCGAT
GAACGGCGTCTCGTTCCGCCTCCCGTCCCCCGAGACGTCTCTCCTCGGGGCGCACGTCGA
CGGCGTCGCGGGGGTCTTCACGGCAGATTTCCCGGACGGTCCGCCGCCGAGCGGCACGGC
GATGTCGGTGGGGACCAAGCTCAAGAAGCTCAGCTACAACTCGGTGGTGGAGATCGTGCT
GCAGAACCCGGCGGCCGTCCCGACGGAGAACCACCCGATCCACCTCCACGGCTTCAACTT
CTTCGTGCTGGCGCAGGGGATGGGTACCTTCGCCCCGGGAAGCGTGGCCTACAACCTGGT
GGACCCGGTGGCCCGCAACACCATCGCCGTGCCTGGCGGTGGCTGGGCTGTCATACGCTT
CGTCGCCAACAATCCAGGCATGTGGTTCTTTCACTGCCACCTGGACCCGCACGTGCCTAT
GGGCCTGGGCATGGTGTTCCAGGTGGACAGCGGGACGACGCCCGGCTCCACGCTCCCTAC
GCCGCCGGGGGATTGGGTGGGAGTATGCGACGCGCAGCACTACGCGGCCGCGGCGGCGGT
AGCAGCAGCGCCGGTGCCAGTTCCGGCCCCAGCCCCAGTCCCAGCACCAATCCTAGCGCC
AGCACCAGCAGAATCGCCGTTGCCACCTCCGCGCGCGGTGGACCACAAGCCGTCGCCCAA
CCTTCCTCAGCGCAGGGAGCACACGGGTACCTCTAATTCCGCTGCTGGACGGAGAGCTAA
GGGGCACCTCGCTTGTTTCTTGTGTTCTGTCCTCCTTTTCTTTCTTCTTCGTCAACACAA
GGCCTAGCTCATGGGAAGCTTTGGCGTGATACCCGCGCAGAATCTGCAGTTTTGTTCGTT
CGTGTAAGTAATATGAAATTGTTTTTTCTTTAAATCTTTTATACACGTGTATATGGATTT
ATATTCTGATGTAATTGTGTGACCTTTTCCTTCTCCACGTGGGAAGTTGTGCATAGCAAA
GTTCATGTTTAGGGTTTATTGGCTCTCTGTATTCATGATAGACATTGATACAAAGTAATA
TCATACACTACGGTTTG