Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042842_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:3:181817398:181820628:1 gene:Zm00001d042842 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:starch phoshorylase2 description: starch phoshorylase2
Sequence

ATGGGTTATTTCCAGGATATGATTGCCAGATTTAAAGAAAGGAAATCTGATAGAGTTTCA
GGGAAGTGGAGTGAGTTCCCTACTAAAGTTGCTGTTCAACTGAATGACACTCACCCTACT
CTTGCCATCCCTGAGCTAATGAGGTTACTTATGGATGAGGAGGGACTTGGTTGGGATGAA
GCTTGGGACATTACATATAGGACAATTTCCTACACCAATCATACAGTTCTCCCCGAAGCT
CTTGAAAAATGGTCACAAATTGTGATGAGGAAATTACTTCCCCGACACATGGAAATTATT
GAGGAAATTGACAAGCGGTTCAAAGAATTGGTAATCTCCAAACATAAGGAAATGGAGGGA
AAAATCGATTCAATGAAAGTTTTAGATAATTCGAACCCCCAGAAGCCGGTAGTGCGCATG
GCAAATTTGTGTGTGGTGTCTTCTCATACGGTGAATGGAGTGGCTGAGTTGCATAGCAAC
ATTTTGAAGCAAGAACTATTTGCAGATTATGTCTCTATATGGCCTACCAAATTCCAAAAC
AAAACTAATGGAATCACGCCTCGAAGATGGCTCCGGTTTTGTAACCCTGAGTTGAGTGAA
ATAGTCACAAAATGGCTAAAGTCAGATCAGTGGACAAGTAATCTTGATCTGCTCACTGGA
CTTCGCAAATTTGCAGATGATGAAAAGCTTCATGCTGAGTGGGCAGCAGCCAAGTTATCT
TGCAAGAAGCGCCTGGCCAAACATGTGTTGGATGTGACAGGTGTTACGATTGATCCAACT
AGCCTTTTTGATATACAGATTAAGCGCATACATGAGTACAAGAGACAGCTCCTAAACATA
TTGGGAGCTGTTTACAGATACAAAAAATTAAAGGGAATGAGTGCAGAAGAGAAGCAGAAG
GTCACACCGCGCACTGTCATGATAGGAGGGAAAGCGTTTGCAACATACACTAATGCCAAA
AGAATAGTGAAATTGGTGAATGATGTTGGTGCTGTTGTGAACAATGATCCCGAAGTTAAC
AAATATCTGAAGGTTGTCTTTATCCCAAATTACAATGTATCAGTGGCTGAAGTGCTTATT
CCTGGTAGCGAATTGTCACAGCATATTAGTACTGCTGGTATGGAAGCAAGTGGAACAAGC
AACATGAAATTCTCTCTGAATGGTTGTGTTATCATTGGCACCCTTGATGGAGCTAATGTT
GAAATAAGAGAGGAGGTTGGAGAAGATAATTTCTTCCTTTTCGGTGCCAAAGCCGATGAA
GTTGCTGGGCTGAGGAAGGATAGAGAAAATGGTCTGTTCAAACCAGACCCACGTTTTGAA
GAAGCCAAGCAGTTTATAAGGAGTGGCGCTTTTGGCAGCTATGACTATGAACCTCTCTTG
GATTCCCTTGAAGGGAATTCTGGATTTGGGCGTGGTGATTATTTCCTTGTTGGCTATGAC
TTCCCAAGCTACATCGATGCACAGGATCGGGTGGATGCAGCCTACAAGGATAAGAAGAAG
TGGACCAAGATGTCCATCTTGAACACAGCTGGGAGTGGCAAATTCAGTAGCGATCGCACC
ATCGCCCAGTATGCCAAGGAGATATGGGACATCAAGGCTAGCCCTGTCGTGTGA

Peptide Sequence

PEP ID

Zm00001d042842_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:3:181817398:181820628:1 gene:Zm00001d042842 transcript:Zm00001d042842_T007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:starch phoshorylase2 description: starch phoshorylase2
Sequence

MGYFQDMIARFKERKSDRVSGKWSEFPTKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDE
AWDITYRTISYTNHTVLPEALEKWSQIVMRKLLPRHMEIIEEIDKRFKELVISKHKEMEG
KIDSMKVLDNSNPQKPVVRMANLCVVSSHTVNGVAELHSNILKQELFADYVSIWPTKFQN
KTNGITPRRWLRFCNPELSEIVTKWLKSDQWTSNLDLLTGLRKFADDEKLHAEWAAAKLS
CKKRLAKHVLDVTGVTIDPTSLFDIQIKRIHEYKRQLLNILGAVYRYKKLKGMSAEEKQK
VTPRTVMIGGKAFATYTNAKRIVKLVNDVGAVVNNDPEVNKYLKVVFIPNYNVSVAEVLI
PGSELSQHISTAGMEASGTSNMKFSLNGCVIIGTLDGANVEIREEVGEDNFFLFGAKADE
VAGLRKDRENGLFKPDPRFEEAKQFIRSGAFGSYDYEPLLDSLEGNSGFGRGDYFLVGYD
FPSYIDAQDRVDAAYKDKKKWTKMSILNTAGSGKFSSDRTIAQYAKEIWDIKASPVV

Transcript Sequence

Transcript ID

Zm00001d042842_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:181817398:181820628:1 gene:Zm00001d042842 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:starch phoshorylase2 description: starch phoshorylase2
Sequence

ATGGGTTATTTCCAGGATATGATTGCCAGATTTAAAGAAAGGAAATCTGATAGAGTTTCA
GGGAAGTGGAGTGAGTTCCCTACTAAAGTTGCTGTTCAACTGAATGACACTCACCCTACT
CTTGCCATCCCTGAGCTAATGAGGTTACTTATGGATGAGGAGGGACTTGGTTGGGATGAA
GCTTGGGACATTACATATAGGACAATTTCCTACACCAATCATACAGTTCTCCCCGAAGCT
CTTGAAAAATGGTCACAAATTGTGATGAGGAAATTACTTCCCCGACACATGGAAATTATT
GAGGAAATTGACAAGCGGTTCAAAGAATTGGTAATCTCCAAACATAAGGAAATGGAGGGA
AAAATCGATTCAATGAAAGTTTTAGATAATTCGAACCCCCAGAAGCCGGTAGTGCGCATG
GCAAATTTGTGTGTGGTGTCTTCTCATACGGTGAATGGAGTGGCTGAGTTGCATAGCAAC
ATTTTGAAGCAAGAACTATTTGCAGATTATGTCTCTATATGGCCTACCAAATTCCAAAAC
AAAACTAATGGAATCACGCCTCGAAGATGGCTCCGGTTTTGTAACCCTGAGTTGAGTGAA
ATAGTCACAAAATGGCTAAAGTCAGATCAGTGGACAAGTAATCTTGATCTGCTCACTGGA
CTTCGCAAATTTGCAGATGATGAAAAGCTTCATGCTGAGTGGGCAGCAGCCAAGTTATCT
TGCAAGAAGCGCCTGGCCAAACATGTGTTGGATGTGACAGGTGTTACGATTGATCCAACT
AGCCTTTTTGATATACAGATTAAGCGCATACATGAGTACAAGAGACAGCTCCTAAACATA
TTGGGAGCTGTTTACAGATACAAAAAATTAAAGGGAATGAGTGCAGAAGAGAAGCAGAAG
GTCACACCGCGCACTGTCATGATAGGAGGGAAAGCGTTTGCAACATACACTAATGCCAAA
AGAATAGTGAAATTGGTGAATGATGTTGGTGCTGTTGTGAACAATGATCCCGAAGTTAAC
AAATATCTGAAGGTTGTCTTTATCCCAAATTACAATGTATCAGTGGCTGAAGTGCTTATT
CCTGGTAGCGAATTGTCACAGCATATTAGTACTGCTGGTATGGAAGCAAGTGGAACAAGC
AACATGAAATTCTCTCTGAATGGTTGTGTTATCATTGGCACCCTTGATGGAGCTAATGTT
GAAATAAGAGAGGAGGTTGGAGAAGATAATTTCTTCCTTTTCGGTGCCAAAGCCGATGAA
GTTGCTGGGCTGAGGAAGGATAGAGAAAATGGTCTGTTCAAACCAGACCCACGTTTTGAA
GAAGCCAAGCAGTTTATAAGGAGTGGCGCTTTTGGCAGCTATGACTATGAACCTCTCTTG
GATTCCCTTGAAGGGAATTCTGGATTTGGGCGTGGTGATTATTTCCTTGTTGGCTATGAC
TTCCCAAGCTACATCGATGCACAGGATCGGGTGGATGCAGCCTACAAGGATAAGAAGAAG
TGGACCAAGATGTCCATCTTGAACACAGCTGGGAGTGGCAAATTCAGTAGCGATCGCACC
ATCGCCCAGTATGCCAAGGAGATATGGGACATCAAGGCTAGCCCTGTCGTGTGAACGAGG
GGGTTGCGATTCAACACCAAACGTAGTTTCTTGGGGTGCTATAATAGTAAGGAAGAATAA
TGACCCACGGTGCTTGACGCCCACTTGCGTTGTAGGCATGGAACGGGGGCACCTAGCTTG
TTCTACAGCGCTGTCTATTTTGAATTGGTGCGACTTTGTTGCTCTTTTTTCCTCCCCCTT
ATATCTTATGAAACAAGATCCTTTTGATCTGTGCTCTGAAATAAAATAATTCAGTTATGA
TATTCGT