Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042814_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:181034861:181036504:-1 gene:Zm00001d042814 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 86A1
Sequence

ATGGCCACTGTACAGGACAACGGTGTCCTGCACTTGCACCCCTATGCCGTCGCCGCGGCG
GCAGCGGCATTGATCTCGGCGTACATGGTGTGGTTCTGGGCGCTGACGCGACGGCTGTCC
GGGCCGCGGATGTGGCCCCTCGTCGGCAGCCTGCCCAGCGTCGTCCTGAACCGGGCGCGG
GTTCACGACTGGATCGTCGACAACCTGCGCTCCAAGGGGGAAGCGGCCACGTACCAGACG
TGCATCTTGCCGCTGCCGTTCTTGGCGCGGCGCCAGGGGCTGGTGACCGTCACGTGCAAC
CCGCGGAACCTGGAGCACATCCTGCGCGCGCGTTTCGACAACTACCCCAAGGGCCCCATG
TGGCAGGCGGCGTTCCACGATCTCCTGGGCCAAGGCATCTTCAACTCCGACGGCGAGACG
TGGCTGCTCCAGCGCAAGACGGCGGCGCTCGAGTTCACCACGAGGACCTTGCGCCAGGCG
ATGGCGCGCTGGGCCAACCGCATCATCAAGTACCGCCTGTGGAGTATCCTCGCAGACCAC
TGCGAGGCCGCGGCGAGCGTCGACCTCCAGGACCTGCTCTTGCGCCTCACCTTCGACAAC
ATCTGTGGCCTCACCTTCGGCAAGGACCCCGAGACACTGTCGCCGGGGTTGCAGGAGAAC
CCCTTCGCCAACGCCTTCGACTCCGCCACCGAGGCGACGCTGCAGAGGTTCCTGTTCCCC
AGCTTCCTGTGGCGCGTCAAGAAGGCGCTCGGCGTCGGCAGCGAGCGGAGCCTCCGCGAG
AGCCTCGCGATCGTGGACCAGTACATGACGGAGGCCATCGCGGCGCGCAAGGCGAATCCG
TCGGACGACCTGCTCTCCAGGTTCATGAAGAAGCGCGACGGCAGCGGCAGGGCGTTCCCC
GAGGACGTGCTCCAGTGGGTCGCGCTCAACTTCGTGCTCGCGGGACGCGACACGTCGTCC
GTCGCGCTCAGCTGGTTCTTCTGGATGCTCATGCTGCGGCGCGACGTCGAGCGCAAGGTG
GTCCTGGAGATCGTCTCCGTCCTCAGGGAGACGCGTGGCGACGACTGCGGGAGGTGGACC
GAGGAGCCGCTGGACTTCGACGAGCTGGACCGCCTCGTGTACCTGAAGGCGGCATTGGCG
GAGACGCTGCGGCTGTACCCGTCGGTGCCGCAGGACTCCAAGTACGTGGTGGAGGACGAC
GTGTTGCCCGATGGCACCGTGGTGCCGGCCGGCTCAGCGGTCACCTACTCCATCTACTCG
GTTGGACGAATGGAGAGCATCTGGGGAAAAGACTGCTCTGAGTTCCGGCCTGAGCGGTGG
CTCTCGGCTGACGGGACCCGGTTCGAGCCGGCCAAGGACGCGTACCGCTTCGTGGCGTTC
AACGGAGGGCCGCGGACGTGCCTGGGCAAGGACCTGGCGTACTTGCAGATGAAGTCTATC
GCTTCCGCTGTGCTACTGCGCCACTCGGTGGAGCTCGTCCCTGGACACAAGGTGGAGCAG
AAGATGTCGCTCACTCTGTTCATGAAGAACGGCCTCCGAGTGCACGTCAAGCCGCGGGAC
CTCGCCGGCTACGTCGTGGCACCGGAGGAAGCCCCGCAGCTGGGAGCCTTTGTGATCTCG
ACCACAACTGCAGCAGCTGCATAA

Peptide Sequence

PEP ID

Zm00001d042814_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:181034861:181036504:-1 gene:Zm00001d042814 transcript:Zm00001d042814_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 86A1
Sequence

MATVQDNGVLHLHPYAVAAAAAALISAYMVWFWALTRRLSGPRMWPLVGSLPSVVLNRAR
VHDWIVDNLRSKGEAATYQTCILPLPFLARRQGLVTVTCNPRNLEHILRARFDNYPKGPM
WQAAFHDLLGQGIFNSDGETWLLQRKTAALEFTTRTLRQAMARWANRIIKYRLWSILADH
CEAAASVDLQDLLLRLTFDNICGLTFGKDPETLSPGLQENPFANAFDSATEATLQRFLFP
SFLWRVKKALGVGSERSLRESLAIVDQYMTEAIAARKANPSDDLLSRFMKKRDGSGRAFP
EDVLQWVALNFVLAGRDTSSVALSWFFWMLMLRRDVERKVVLEIVSVLRETRGDDCGRWT
EEPLDFDELDRLVYLKAALAETLRLYPSVPQDSKYVVEDDVLPDGTVVPAGSAVTYSIYS
VGRMESIWGKDCSEFRPERWLSADGTRFEPAKDAYRFVAFNGGPRTCLGKDLAYLQMKSI
ASAVLLRHSVELVPGHKVEQKMSLTLFMKNGLRVHVKPRDLAGYVVAPEEAPQLGAFVIS
TTTAAAA

Transcript Sequence

Transcript ID

Zm00001d042814_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:181034861:181036504:-1 gene:Zm00001d042814 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 86A1
Sequence

ATGGCCACTGTACAGGACAACGGTGTCCTGCACTTGCACCCCTATGCCGTCGCCGCGGCG
GCAGCGGCATTGATCTCGGCGTACATGGTGTGGTTCTGGGCGCTGACGCGACGGCTGTCC
GGGCCGCGGATGTGGCCCCTCGTCGGCAGCCTGCCCAGCGTCGTCCTGAACCGGGCGCGG
GTTCACGACTGGATCGTCGACAACCTGCGCTCCAAGGGGGAAGCGGCCACGTACCAGACG
TGCATCTTGCCGCTGCCGTTCTTGGCGCGGCGCCAGGGGCTGGTGACCGTCACGTGCAAC
CCGCGGAACCTGGAGCACATCCTGCGCGCGCGTTTCGACAACTACCCCAAGGGCCCCATG
TGGCAGGCGGCGTTCCACGATCTCCTGGGCCAAGGCATCTTCAACTCCGACGGCGAGACG
TGGCTGCTCCAGCGCAAGACGGCGGCGCTCGAGTTCACCACGAGGACCTTGCGCCAGGCG
ATGGCGCGCTGGGCCAACCGCATCATCAAGTACCGCCTGTGGAGTATCCTCGCAGACCAC
TGCGAGGCCGCGGCGAGCGTCGACCTCCAGGACCTGCTCTTGCGCCTCACCTTCGACAAC
ATCTGTGGCCTCACCTTCGGCAAGGACCCCGAGACACTGTCGCCGGGGTTGCAGGAGAAC
CCCTTCGCCAACGCCTTCGACTCCGCCACCGAGGCGACGCTGCAGAGGTTCCTGTTCCCC
AGCTTCCTGTGGCGCGTCAAGAAGGCGCTCGGCGTCGGCAGCGAGCGGAGCCTCCGCGAG
AGCCTCGCGATCGTGGACCAGTACATGACGGAGGCCATCGCGGCGCGCAAGGCGAATCCG
TCGGACGACCTGCTCTCCAGGTTCATGAAGAAGCGCGACGGCAGCGGCAGGGCGTTCCCC
GAGGACGTGCTCCAGTGGGTCGCGCTCAACTTCGTGCTCGCGGGACGCGACACGTCGTCC
GTCGCGCTCAGCTGGTTCTTCTGGATGCTCATGCTGCGGCGCGACGTCGAGCGCAAGGTG
GTCCTGGAGATCGTCTCCGTCCTCAGGGAGACGCGTGGCGACGACTGCGGGAGGTGGACC
GAGGAGCCGCTGGACTTCGACGAGCTGGACCGCCTCGTGTACCTGAAGGCGGCATTGGCG
GAGACGCTGCGGCTGTACCCGTCGGTGCCGCAGGACTCCAAGTACGTGGTGGAGGACGAC
GTGTTGCCCGATGGCACCGTGGTGCCGGCCGGCTCAGCGGTCACCTACTCCATCTACTCG
GTTGGACGAATGGAGAGCATCTGGGGAAAAGACTGCTCTGAGTTCCGGCCTGAGCGGTGG
CTCTCGGCTGACGGGACCCGGTTCGAGCCGGCCAAGGACGCGTACCGCTTCGTGGCGTTC
AACGGAGGGCCGCGGACGTGCCTGGGCAAGGACCTGGCGTACTTGCAGATGAAGTCTATC
GCTTCCGCTGTGCTACTGCGCCACTCGGTGGAGCTCGTCCCTGGACACAAGGTGGAGCAG
AAGATGTCGCTCACTCTGTTCATGAAGAACGGCCTCCGAGTGCACGTCAAGCCGCGGGAC
CTCGCCGGCTACGTCGTGGCACCGGAGGAAGCCCCGCAGCTGGGAGCCTTTGTGATCTCG
ACCACAACTGCAGCAGCTGCATAA