Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042809_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:3:180800077:180806507:-1 gene:Zm00001d042809 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin transporter-like1 description:Auxin transporter-like protein 1
Sequence	ATGGCGCGCGAGCAGCTGGAGGAGTCCATCGTGGCCGACGGCAACGGCAAGGAGGAAGAG GTCGGGGTCATGGGCATCGGCGCCGCGGACGGCGCCGACGACCAGCACGGCGGCGGCAAG CTCAGCATGAAGAGCCTGCTGTGGCACGGCGGCTCCGTCTGGGACGCGTGGTTCAGCTGC GCCTCCAACCAGGTGGCGCAGGTGCTCCTGACGCTGCCGTACTCCTTCTCCCAGCTGGGG ATGCTGTCCGGCGTGCTGCTGCAGATCTTCTACGGCTTCCTTGGCAGCTGGACCGCGTAC CTCATCAGCGTCCTCTACGTCGAGTACCGCTCCCGCAAGGAGAAGGAGGGCGTCAGCTTC AAGAACCACGTCATCCAGTGGTTCGAGGTGCTGGACGGGCTGCTGGGCCCCTACTGGAAG GCGGCGGGTCTGGCCTTCAACTGCACGTTCCTGCTGTTCGGCTCCGTCATCCAGCTGATC GCCTGCGCGAGCAACATCTACTACATCAACGACCGGCTGGACAAGCGGACATGGACGTAC ATCTTCGGCGCCTGCTGCGCCACCACGGTGTTCATCCCGTCCTTCCACAACTACCGGATC TGGTCCTTCCTGGGCCTCGGCATGACCACCTACACCGCGTGGTACCTCGCCATCGCCGCG CTCCTCAACGGCCAGGCCGAAGGCGTGGCGCACTCCGGCCCCACCAAGCTCGTGCTCTAC TTCACCGGCGCCACCAACATCCTCTACACCTTCGGCGGCCACGCCGTCACAGTCGAGATC ATGCACGCGATGTGGAAGCCCGCCAAGTTCAAATACATCTACCTGCTGGCGACGCTGTAC GTGTTCACGCTGACGCTGCCGTCGTCGGCGGCCATGTACTGGGCGTTCGGCGACGAGCTG CTGACCCACTCGAACGCCTTCTCGCTGCTGCCCAAGACCCGGTGGCGCGACGCGGCGGTG ATCCTGATGCTGATCCACCAGTTCATCACCTTCGGCTTCGCGTGCACGCCGCTCTACTTC GTGTGGGAGAAGGTGATCGGGATGCACGACGCCAAGAGCATCTTCAAGCGCGCGCTGGCG AGGCTGCCCATCGTCGTGCCCATCTGGTTCCTCGCCATCATCTTCCCCTTCTTCGGGCCC ATCAACTCCGCCGTCGGCGCGCTGCTCGTCAGCTTCACCGTCTACATCATCCCGGCCCTG GCGCACGTCCTCACCTACCGCACGGCGTCCGCGCGCATGGTACGTATACATATGCATGCG TGCATTTGCATTGCATTGCACCCCCGTCGTTTAGCAAACAATAACAACGGCGTCCTGTGG CCTGGCCGGCCGTCGCGTTGCCTAATGCCTACTGGTTCGGGTACGAGTAAGTGA

Peptide Sequence

PEP ID	Zm00001d042809_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:3:180800077:180806507:-1 gene:Zm00001d042809 transcript:Zm00001d042809_T008 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin transporter-like1 description:Auxin transporter-like protein 1
Sequence	MAREQLEESIVADGNGKEEEVGVMGIGAADGADDQHGGGKLSMKSLLWHGGSVWDAWFSC ASNQVAQVLLTLPYSFSQLGMLSGVLLQIFYGFLGSWTAYLISVLYVEYRSRKEKEGVSF KNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTY IFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALLNGQAEGVAHSGPTKLVLY FTGATNILYTFGGHAVTVEIMHAMWKPAKFKYIYLLATLYVFTLTLPSSAAMYWAFGDEL LTHSNAFSLLPKTRWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDAKSIFKRALA RLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHVLTYRTASARMVRIHMHA CICIALHPRRLANNNNGVLWPGRPSRCLMPTGSGTSK

Transcript Sequence

Transcript ID	Zm00001d042809_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:180800077:180806507:-1 gene:Zm00001d042809 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin transporter-like1 description:Auxin transporter-like protein 1
Sequence	GCCCTCTCTCCGCTCGCTCGCTCTCTCTCTCACCGAATCACACACACAGGCAGGCCAGTG AGGCAGGGGCACGAAGGCGCGGCTCCCTCTCTCAAGCCCCTCGCCATTACTCGCTCATAA AGGAAGAACAGAGCGAGCGGGTAGCGAGGAAGAAGCTGGGCCGCGGGGCAAGAGGAGAGA GGTCCCCAGCCGTAGGTCTGCTGTGCAACTCCGGCTCGCCGCCTGCCAACCGCGCGGCGC GGCCACCACGCTAGGCCCCTCGCCCTCCTCGTAGGTGAACAGAGCCTGCAGTCGATACAA CAGTAAATTCCGCGGCATTCCATTCGCTTTCCCTCTCGAAACGCACCCTGCATTTACTGC ACGTCGCTCGCCCTCCGGCCATCCGCGATCTTCAAATCTTCCACTGTAAAAAGCGGGCGG AGACGGGAAGGCCGTGCGCTCAAGGATGGCGCGCGAGCAGCTGGAGGAGTCCATCGTGGC CGACGGCAACGGCAAGGAGGAAGAGGTCGGGGTCATGGGCATCGGCGCCGCGGACGGCGC CGACGACCAGCACGGCGGCGGCAAGCTCAGCATGAAGAGCCTGCTGTGGCACGGCGGCTC CGTCTGGGACGCGTGGTTCAGCTGCGCCTCCAACCAGGTGGCGCAGGTGCTCCTGACGCT GCCGTACTCCTTCTCCCAGCTGGGGATGCTGTCCGGCGTGCTGCTGCAGATCTTCTACGG CTTCCTTGGCAGCTGGACCGCGTACCTCATCAGCGTCCTCTACGTCGAGTACCGCTCCCG CAAGGAGAAGGAGGGCGTCAGCTTCAAGAACCACGTCATCCAGTGGTTCGAGGTGCTGGA CGGGCTGCTGGGCCCCTACTGGAAGGCGGCGGGTCTGGCCTTCAACTGCACGTTCCTGCT GTTCGGCTCCGTCATCCAGCTGATCGCCTGCGCGAGCAACATCTACTACATCAACGACCG GCTGGACAAGCGGACATGGACGTACATCTTCGGCGCCTGCTGCGCCACCACGGTGTTCAT CCCGTCCTTCCACAACTACCGGATCTGGTCCTTCCTGGGCCTCGGCATGACCACCTACAC CGCGTGGTACCTCGCCATCGCCGCGCTCCTCAACGGCCAGGCCGAAGGCGTGGCGCACTC CGGCCCCACCAAGCTCGTGCTCTACTTCACCGGCGCCACCAACATCCTCTACACCTTCGG CGGCCACGCCGTCACAGTCGAGATCATGCACGCGATGTGGAAGCCCGCCAAGTTCAAATA CATCTACCTGCTGGCGACGCTGTACGTGTTCACGCTGACGCTGCCGTCGTCGGCGGCCAT GTACTGGGCGTTCGGCGACGAGCTGCTGACCCACTCGAACGCCTTCTCGCTGCTGCCCAA GACCCGGTGGCGCGACGCGGCGGTGATCCTGATGCTGATCCACCAGTTCATCACCTTCGG CTTCGCGTGCACGCCGCTCTACTTCGTGTGGGAGAAGGTGATCGGGATGCACGACGCCAA GAGCATCTTCAAGCGCGCGCTGGCGAGGCTGCCCATCGTCGTGCCCATCTGGTTCCTCGC CATCATCTTCCCCTTCTTCGGGCCCATCAACTCCGCCGTCGGCGCGCTGCTCGTCAGCTT CACCGTCTACATCATCCCGGCCCTGGCGCACGTCCTCACCTACCGCACGGCGTCCGCGCG CATGGTACGTATACATATGCATGCGTGCATTTGCATTGCATTGCACCCCCGTCGTTTAGC AAACAATAACAACGGCGTCCTGTGGCCTGGCCGGCCGTCGCGTTGCCTAATGCCTACTGG TTCGGGTACGAGTAAGTGACCCGATCCGTTCATCCCCGTTGCCTAGCTAGAGTGCAGTAG TACCGCCACCAGTCGCAGCAGCTGTCACGAACAGTGGCAGGACTGCAACACGAAATAGAC AGTGGAGATCCGTGCACACGCAGCAGCCAGTTCACGTTAGATGCAAAGCACCGGTCCCCC ACTTGGGCAAATCCCCCAATCATTGAATGGAGACAACAGCCACATTCAATTCGAAGCCGG CCCCGCCCCCGCGGCGCCCGACAACGATATGGGACGACGGATCGGGGATCGGAACACCGC ATCACCCCCACGTCATCATCCGCGTCTCTGCCCGTCGCCTCGCCGAATGCCGGTGCCCAT GGCAGATGTAGGCTTCACTGTGCCGGTTCCGACAGCTGGCGGGGGCGGTTTCGGAGCGAC TTTTTTGCGAGTACGGCACGGCGGCGATGGCAACGCCGGCGTGGGTCAAGGAACCGCTTG CCTGTGACGGAAGATCTGACGTAGCGCCGATGCGGTGCTGACGTTGGGTGTCGCGCTGTG ACGGAAGACCCTCCTGGCGAGGCGCGACGCGACGGTGGTCGCGACGTCGCGGCACTGGCG CGCGTCTGGACGCACTCGGCCGGCCAATCGCGCTCCCAGGTCCCAGGGCCCGGCATCGTG TGGCGGTGTGGCTGGAACGCGAGAGATGATGGCTCCTCTGTCCTCCGTAGACAACGGGAT GGCGATGGAGATGTGAGATCTCGGTGTGCGCTGGAGGGTTCCTTTCCTCGCCCTCCGTTT TCCCCAGCTTTTTATTTCCGAAAGGAATTCGAGCAGTGACCCTGTGAAAATGCCTCGAAA AGGATAGGGCTAGGAACAAGCTAAGGCGGGGCACGCCGCGATGCTTATCTTTTATTCATG TCAGTGCTTCTGGCGATCGATTTCATTCTGACGACTGCTGCTCTGTGTTTCCCTGCAAAA AAAAAATTATTTGTTTTTGCAACAGAACGCCGCGGAGAAGCCGCCCTTCTTCCTGCCGAG CTGGACGGGGATGTTCGTCCTCAACATGTTCATCGTGGTGTGGGTGCTGGTGGTCGGCTT CGGGCTGGGCGGCTGGGCCAGCATGGTCAACTTCGTGAGGCAGATCGACACGTTCGGGCT GTTCGCCAAGTGCTACCAGTGCCCGAAGCCGCCGGTCCCGGCGGCCGCGCAGTCACCGGC GCCGCTGCCGCACCACTAGGGCGCGCAGGCCCCGTGACGGCATGGAGCTAGCGTCGCTGC TTGCATTGCAGCCGGTGTTAATTGCTACTAGGTTTTGGTCGCCTTGTAATATACAAGCCT CCTCTAGGGTCGTAGAACTCGATCACAGCAGAGTCACGCAAAGGCGGCTCGTGCCGTGCC GTGCCGCCGCCGCGTTGCTTTCCCGCCCGCCCTCCTCTGCCTGATCGGTCCGTCGGCATT GGTGTCGTTTTGTTTTCGTTTGGCTTGCCACCGGTATTAAAAAGTTGAGTGATGGTCATG GCTTCTTAATCCATATGATGATATGACATACGTATCCTATATAGGTTCATTAGTTATTTT TCCTTGTTGGTTCGTGGAGGTCGGTCCATGTTGTGTAGCGTGTGGGTGACTGTAATGGAC TGCGCTGGAATGCTAGCTAAAGG