Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042770_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:179177569:179178797:-1 gene:Zm00001d042770 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acidic endochitinase
Sequence

ATGGCAAACCGAGCTCTAGCTCCATTCCTGCTCGTGACCACCCTCTTGGTGTCGCTCCTT
GCCACATGCCATGGCGGTGGCATCGCTGTCTACTGGGGCCAGAACGACGGCGAGGCGTCC
CTGTCCGAGACGTGTGCGTCAGGAAACTACAAGTTCGTCATCCTCGCCTTCGTCTACAAG
TTCGGCAAGGGCCAGACGCCGCAGCTAGACCTTGCCAGCCACTGCGACCCCTCATCGGGC
GGCTGCACGGGGTTGAGCAAGGACATACGTTCGTGCCAGAACAGCGGCATCAAGGTCCTG
CTCTCTATCGGCGGCGGCGACGGCAGCTATGGCCTGTCGTCCGAGGGGGACGCGCGGGAC
GTGGCCGCGTACCTCTGGAACAATTACCTCGGCGGCACGTCGTCGTCGCGGCCCCTCGGC
GACGCCGTTCTTGATGGAATTGACTTCGACATCGAGCTTGGCGGCGCCAAGTACTGGGAC
AGCCTGGCCAGGGACCTCAAGAACAAGGGCGGCAAGGGGGTGCTCCTGAGCGCGGCGCCG
CAGTGTCCGTTCCCGGACGAGTGGGACGGCGGCGCGATCAACACGGGGCTGTTCGACTAC
GTGTGGGTGCAGTTCTACAACAACCCTCCGTGCCAGGTGAACGCCGGCCGCGGCGCGTTC
ATGGACGCGTGGAAACAGTGGGAGTCGGTTCCGGCGGGGCAGATCTTCCTAGGCCTGCCC
GCCTCCAAGGACGCGGCCGGCACTGGGTTCGTGCCCGCCGACGATCTCAACTCTAACGTG
CTGCCGCTCATCAGGGGATCGCCCAAGTACGGCGGCGTCATGCTCTGGTCCAAGTACTAC
GACGACCGCGCAGGCTACAGTGACGCCATCAAGAGCCATGTGTGA

Peptide Sequence

PEP ID

Zm00001d042770_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:179177569:179178797:-1 gene:Zm00001d042770 transcript:Zm00001d042770_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acidic endochitinase
Sequence

MANRALAPFLLVTTLLVSLLATCHGGGIAVYWGQNDGEASLSETCASGNYKFVILAFVYK
FGKGQTPQLDLASHCDPSSGGCTGLSKDIRSCQNSGIKVLLSIGGGDGSYGLSSEGDARD
VAAYLWNNYLGGTSSSRPLGDAVLDGIDFDIELGGAKYWDSLARDLKNKGGKGVLLSAAP
QCPFPDEWDGGAINTGLFDYVWVQFYNNPPCQVNAGRGAFMDAWKQWESVPAGQIFLGLP
ASKDAAGTGFVPADDLNSNVLPLIRGSPKYGGVMLWSKYYDDRAGYSDAIKSHV

Transcript Sequence

Transcript ID

Zm00001d042770_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:179177569:179178797:-1 gene:Zm00001d042770 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acidic endochitinase
Sequence

CTCTCCACTCAATACTCGTAGAACAGCTACCTAAAGTAAGCTGGGCACCCTCGATCAAGC
CATGGCAAACCGAGCTCTAGCTCCATTCCTGCTCGTGACCACCCTCTTGGTGTCGCTCCT
TGCCACATGCCATGGCGGTGGCATCGCTGTCTACTGGGGCCAGAACGACGGCGAGGCGTC
CCTGTCCGAGACGTGTGCGTCAGGAAACTACAAGTTCGTCATCCTCGCCTTCGTCTACAA
GTTCGGCAAGGGCCAGACGCCGCAGCTAGACCTTGCCAGCCACTGCGACCCCTCATCGGG
CGGCTGCACGGGGTTGAGCAAGGACATACGTTCGTGCCAGAACAGCGGCATCAAGGTCCT
GCTCTCTATCGGCGGCGGCGACGGCAGCTATGGCCTGTCGTCCGAGGGGGACGCGCGGGA
CGTGGCCGCGTACCTCTGGAACAATTACCTCGGCGGCACGTCGTCGTCGCGGCCCCTCGG
CGACGCCGTTCTTGATGGAATTGACTTCGACATCGAGCTTGGCGGCGCCAAGTACTGGGA
CAGCCTGGCCAGGGACCTCAAGAACAAGGGCGGCAAGGGGGTGCTCCTGAGCGCGGCGCC
GCAGTGTCCGTTCCCGGACGAGTGGGACGGCGGCGCGATCAACACGGGGCTGTTCGACTA
CGTGTGGGTGCAGTTCTACAACAACCCTCCGTGCCAGGTGAACGCCGGCCGCGGCGCGTT
CATGGACGCGTGGAAACAGTGGGAGTCGGTTCCGGCGGGGCAGATCTTCCTAGGCCTGCC
CGCCTCCAAGGACGCGGCCGGCACTGGGTTCGTGCCCGCCGACGATCTCAACTCTAACGT
GCTGCCGCTCATCAGGGGATCGCCCAAGTACGGCGGCGTCATGCTCTGGTCCAAGTACTA
CGACGACCGCGCAGGCTACAGTGACGCCATCAAGAGCCATGTGTGAATTATAAGGCCTAC
TTAGGAATTAGGATACGCTTGTGCATACACACGCGCTTGGTGTTAGCGTCTACCGTTCGT
TTTTGCATTGTGTGCGACTTATTGTATTTTGTGTGTAGTCTTTTCGATTCATTAGTTTGT
CACATGTATATTGTACCAGACTGCTGAATAAAAAGGTGAGATCTT