Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042761_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:3:179084649:179088504:1 gene:Zm00001d042761 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sorting nexin 1
Sequence	ATGGGGCTCTCGCAGGAGAGGAGCTCGTCACAGAGCCAGCGGTCGGCGGCGGCGGGGGCG CCGTTCCTGTCGATCTCCGTCACGGATCCCGTAAAGATGGGTACCGGCGTGCAGTCCTAC ATCTCCTACCGCGTCATCACCAAGACCAACCTCCCTGAATTTGAGGGACCAGAGAAAATT GTTATTCGGCGCTATAGTGATTTTGAATGGTTGCATGATCGGCTTGCTGAGAGGTACAAA GGCATTTTTATACCCCCTCTTCCGGAGAAGAATGCTGTTGAGAAATTCCGGTTTAGCAAG GAGTTCATTGAATTGCGGCGTCAAGCTCTGGATTTATTCGTTAACAGGATAGCTTCACAC CCTGAACTCAAGCAAAGTGATGTCTTGAGGACATTTTTGCAAGCAGATGAAGAGATAATG GATAGGGCAAGATCTTATGAGACTGGTATTTTTAAGAAACCGGCAGATTTCATACAGATG TTTAAGGATGTGCAGTCAAAAGTCAGTGATGTTGTTCTGGGAAAAGAAAAGCCTGTGGAG GAATCTACTCCTGAATATGAGAAGCTTAAAAATTACATATTTGAGCTAGAAAATCATTTA GCAGAGGCCCAAAAACAAGCATACCGTCTTGTGAAAAGACACAGAGAACTTGGTCAATCT TTGGCGGACTTTGGAAAGGCGATTAAGCATTTAGGTGCTTGTGAAGGAGATTTGATGGAA AAGGTGTTTTCTGAAGTTGGTTCGAAGTCAGAGATGTTGTCAATAAAGCTGCAAAGAGAG GCAGACAACCTTCTCTTTAACTTTGAAGAACCCTTGAAAGATTATGTGCGTGCTGTACAA TCTATAAAAGCCACTATGCTTGATCGAGCCAATGCTTTCAGGCAGCACTTCGATTTGGAT CAGGAGAGGAAGTATAAAGAGCTTAATCTTGAAAAATTGAAGTTCATGAACCCTGAAAAG TATGCCGAAGCAGAATCTGAGTTTCGAGAGTTGAAAGCAGACAGTGAGGAGGCTACTAAG AAGTTTGAACACATAGTTAGACTAATGAATGAAGAGCTTGCTCGTTTCCAGGAGCAAAAG ACAGCTGATATTGGACTCGCATTCCATGAATTTGCCAAGGGTCAGGCTAAGCTAGCTAAA GACATTGCGGATGCATGGCGCAGCGTCCTCCCAAAGCTCGAAGCTTGTTCCACATCATAA

Peptide Sequence

PEP ID	Zm00001d042761_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:3:179084649:179088504:1 gene:Zm00001d042761 transcript:Zm00001d042761_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sorting nexin 1
Sequence	MGLSQERSSSQSQRSAAAGAPFLSISVTDPVKMGTGVQSYISYRVITKTNLPEFEGPEKI VIRRYSDFEWLHDRLAERYKGIFIPPLPEKNAVEKFRFSKEFIELRRQALDLFVNRIASH PELKQSDVLRTFLQADEEIMDRARSYETGIFKKPADFIQMFKDVQSKVSDVVLGKEKPVE ESTPEYEKLKNYIFELENHLAEAQKQAYRLVKRHRELGQSLADFGKAIKHLGACEGDLME KVFSEVGSKSEMLSIKLQREADNLLFNFEEPLKDYVRAVQSIKATMLDRANAFRQHFDLD QERKYKELNLEKLKFMNPEKYAEAESEFRELKADSEEATKKFEHIVRLMNEELARFQEQK TADIGLAFHEFAKGQAKLAKDIADAWRSVLPKLEACSTS

Transcript Sequence

Transcript ID	Zm00001d042761_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:179084649:179088504:1 gene:Zm00001d042761 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sorting nexin 1
Sequence	CCATGATCTCGCCGGTAACCACTATACCCGCTCCTTCGCATCATACCTTCTGCTGCGCTT CTGACCATTGGTTCGGTCGGCTGGAATTTGGAGCTGAATCTGTCTATGGGGCTCTCGCAG GAGAGGAGCTCGTCACAGAGCCAGCGGTCGGCGGCGGCGGGGGCGCCGTTCCTGTCGATC TCCGTCACGGATCCCGTAAAGATGGGTACCGGCGTGCAGTCCTACATCTCCTACCGCGTC ATCACCAAGACCAACCTCCCTGAATTTGAGGGACCAGAGAAAATTGTTATTCGGCGCTAT AGTGATTTTGAATGGTTGCATGATCGGCTTGCTGAGAGGTACAAAGGCATTTTTATACCC CCTCTTCCGGAGAAGAATGCTGTTGAGAAATTCCGGTTTAGCAAGGAGTTCATTGAATTG CGGCGTCAAGCTCTGGATTTATTCGTTAACAGGATAGCTTCACACCCTGAACTCAAGCAA AGTGATGTCTTGAGGACATTTTTGCAAGCAGATGAAGAGATAATGGATAGGGCAAGATCT TATGAGACTGGTATTTTTAAGAAACCGGCAGATTTCATACAGATGTTTAAGGATGTGCAG TCAAAAGTCAGTGATGTTGTTCTGGGAAAAGAAAAGCCTGTGGAGGAATCTACTCCTGAA TATGAGAAGCTTAAAAATTACATATTTGAGCTAGAAAATCATTTAGCAGAGGCCCAAAAA CAAGCATACCGTCTTGTGAAAAGACACAGAGAACTTGGTCAATCTTTGGCGGACTTTGGA AAGGCGATTAAGCATTTAGGTGCTTGTGAAGGAGATTTGATGGAAAAGGTGTTTTCTGAA GTTGGTTCGAAGTCAGAGATGTTGTCAATAAAGCTGCAAAGAGAGGCAGACAACCTTCTC TTTAACTTTGAAGAACCCTTGAAAGATTATGTGCGTGCTGTACAATCTATAAAAGCCACT ATGCTTGATCGAGCCAATGCTTTCAGGCAGCACTTCGATTTGGATCAGGAGAGGAAGTAT AAAGAGCTTAATCTTGAAAAATTGAAGTTCATGAACCCTGAAAAGTATGCCGAAGCAGAA TCTGAGTTTCGAGAGTTGAAAGCAGACAGTGAGGAGGCTACTAAGAAGTTTGAACACATA GTTAGACTAATGAATGAAGAGCTTGCTCGTTTCCAGGAGCAAAAGACAGCTGATATTGGA CTCGCATTCCATGAATTTGCCAAGGGTCAGGCTAAGCTAGCTAAAGACATTGCGGATGCA TGGCGCAGCGTCCTCCCAAAGCTCGAAGCTTGTTCCACATCATAAATGTGATTTGTGTTT CCTCATGATGTTTGGGAATGGGATAGGGGGTTGGCAGCTGGTGAGTTTAGGCTGTTTTTT CCCAGCCTGTTTTGACACTGATTACTGTATACTTGAACTGCGGTTTGGAAATGCTCCAGC TGTTAGGTTCAGTTGACGTCATTTCTTGCTGTTTGAG