Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042747_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:3:178858472:178864409:1 gene:Zm00001d042747 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase Nek5
Sequence	ATGGAGTCACGGATGGATCAGTACGAGGTTTTGGAGCAGATTGGTCGCGGCGCCTTTGGT GCTGCCATCCTCGTCAACCACAAGACAGAGAAAAAGAAGTATGTGTTGAAGAAAATACGT CTTGCAAGGCAGACAGAGCGATGCCGCAAGTCTGCTCACCAGGAGATGGCTCTTATTGCT CGCTTGCAACATCCTTACATCGTTGAGTTCAAGGAGGCATGGGTTGAGAAGGGCTGCTAT GTTTGCATTGTGACGGGATACTGTGAAGGTGGCGATATGGCTGAATTGATGAAAAAAGCG AATGGGACATACTTCCCAGAGGAGAAACTACTGAGATGGTTTGCGCAATTGGCATTAGCT GTTGACTACTTGCATTCAAACTTTGTTTTGCATCGAGATCTCAAGTGCTCAAACATATTT CTTACCAAAGAACAGGATATTCGTCTTGGAGATTTTGGCCTGGCCAAGACTTTAAAGGCA GATGATCTAGCCTCTTCGGTTGTGGGAACACCAAATTATATGTGCCCAGAGTTGCTTACA GACATTCCCTATGGATTCAAGTCAGATATATGGTCTCTTGGATGTTGTATGTATGAGATG GCTGCTCATCGACCTGCTTTCAAGGCTTTTGATATGGCTGGACTGATAAGTAAGATAAAT CGCTCCTCCATTGGCCCTTTGCCTACTTTCTATTCTTCATCTATGAAAACACTTATCAAA AGCATGTTGAGGAAGAGTCCTGAACATCGACCTACTGCATCCGAGATTATAAAAAATCCA TACCTCCAACCTTATGTGAATCAATACCGTCCATTTGCTAATATATTACATCCTGGTCGA TCACCAGAGAAACCTGGCACCGATTCACGGAGCAGTCAGAAAAGTATGTCTGGGAGTCAG TGTAGTAGCATTTCTGGAACTGGCAGTGATATGGATAGCATACAATCAAATGAAAGAAAC ACGTCAGGACTAGCTTCAAGTTCCAGCAACACCATTGATACCGAGGGTGCTGAAACTACT GAACTTCAGAGACATAAAGATACTGCTTGTCCTGGACTCAAGAGACAAGATTCATCAAAA TCCGTACAAGATAATCAACATCCTGGACATGAGAATAAGCAACCAAAGATAATTAAGAAG ATACTAACAACTCTAAGAGAGGAGAGCAAATTTAGGGAAAGCAATTCTCCTGTTAGAGCT AGCCGTGTAAAGCTAAATTCACCTAGCAATAGAGAACGCTCATCTGACGACTCAAAGCAA AGTGATATTTCCTCCAGTTCAAGGTCTAGTGAAGTTATGTCACATGAATCAGCAAATGCA AGCTGTGAACCTGTCAAACGAGGACATGCATCTCCTCCCTTGAAGCATTTGTCACCAATT GTTGAGCATTCTCCGAAGGTTAAAATTAAAGTAGATGAGCTATTACATCCACACCTTGCC AAGCAGGTTGGAGAAGTTGTTGATGCAGCTGCAGGGAAGGTTAAGAACAGAACACCGCCC ATTTTTATTAAATGCACCAGTATTCCTACTCGGAGGCAAGGAGTAGCAAGTCCAAGCCGT CAACACACTGGGGTAAAGCGAGCTCACAATAAGGTCATGGCAGAGCATGCAAGGAATCCT TGTCAGCATCTCCATAGTCCAAGCAACGCTCTTGTGAAACTTCCAAGTGTTCCAATGGTT CCTCCAAGTCATCTAGAAGATCTTAAGAGAAAACCAGACAATACACGAGCAAAATCTGCT CCTCCTAGGGCTTTAGCAACCAAGGAAGACAACAGTGCTTGCTCCAGTTCTACGATTGGT AATGCTGAAAACACCAACCAGTCTGAACCGTCTGAACCTGACTCACCAACTTATTTGGTC TCATCCTGCAAATGTTTGATACCTGACACTATCATACAAAAGCACGGCATAACAAGTAAA AAAAGTTCAGAAATCATCACAACCAATTGTGAGAAGAAAATGACTAGTAATGGTGATCTT AGTCTAAGCGCAGCCATGGTGCAATCTTCTGATATTCCTGAACAAGAGTTTATTTGCAAG GATGGAATGCTCTCCAGTCAGGTGGGTCAGTGCAGTGAAACAGTTACTGTACCAAGCGAT GAAGACAAGTTCACAGTGCGGGAACTGCTTTCATCAGTACCAGATCTTTGTTCCTTGGTC CCAACAACAATGATGAACACTGAGCCAGGAAGAGGACCCACTCTCACCCAGTCATCAGAG AAACCATCGGGTCCTCATTTAAATCCTCCTCCAGTTGAGGACATTATACATGTCATAAGC CACAGCAGTTTCCATGTGAATGGTGAGCAGGCAGTAAAAGAAACTGGATCAGAGAGCATT GATGTTGACAAACGTCTTAACATGGTAAGAGAAGAGATAGGTGTAAGAAGCACCGAGCCA AACCTCATACCTTCTGGACCTATAGATTCTGATACGGTGAAGCCAAATGTAGTAGAAGCT AATATTACCTTTCAGAAACCATCCAGTACAGATGCCATAAAACTGCCAACCATACCGGAA GGAAATTTTAGTACTCTGGAGACCAACAATGGGTTTAAGCAGGAAGCAGCTCCGGCTAAG GAAATACTAGATGTGACATCTTTCAGGCAGCGAGCTGAGGCTCTGGAAGGTCTCTTAGAA CTTTCTGCAGAATTACTGGAACACAGTAGGCTGGAGGAGCTTGCGATTGTTCTAAAGCCA TTTGGGAAGGCCAAGGTGTCCCCTCGAGAAACAGCAATATGGTTGGCTAAAAGTTTCAAA GGCTTGATGAATGACGAAGCAAGCCGCAGTTCAACGTGA

Peptide Sequence

PEP ID	Zm00001d042747_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:3:178858472:178864409:1 gene:Zm00001d042747 transcript:Zm00001d042747_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase Nek5
Sequence	MESRMDQYEVLEQIGRGAFGAAILVNHKTEKKKYVLKKIRLARQTERCRKSAHQEMALIA RLQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKANGTYFPEEKLLRWFAQLALA VDYLHSNFVLHRDLKCSNIFLTKEQDIRLGDFGLAKTLKADDLASSVVGTPNYMCPELLT DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPTFYSSSMKTLIK SMLRKSPEHRPTASEIIKNPYLQPYVNQYRPFANILHPGRSPEKPGTDSRSSQKSMSGSQ CSSISGTGSDMDSIQSNERNTSGLASSSSNTIDTEGAETTELQRHKDTACPGLKRQDSSK SVQDNQHPGHENKQPKIIKKILTTLREESKFRESNSPVRASRVKLNSPSNRERSSDDSKQ SDISSSSRSSEVMSHESANASCEPVKRGHASPPLKHLSPIVEHSPKVKIKVDELLHPHLA KQVGEVVDAAAGKVKNRTPPIFIKCTSIPTRRQGVASPSRQHTGVKRAHNKVMAEHARNP CQHLHSPSNALVKLPSVPMVPPSHLEDLKRKPDNTRAKSAPPRALATKEDNSACSSSTIG NAENTNQSEPSEPDSPTYLVSSCKCLIPDTIIQKHGITSKKSSEIITTNCEKKMTSNGDL SLSAAMVQSSDIPEQEFICKDGMLSSQVGQCSETVTVPSDEDKFTVRELLSSVPDLCSLV PTTMMNTEPGRGPTLTQSSEKPSGPHLNPPPVEDIIHVISHSSFHVNGEQAVKETGSESI DVDKRLNMVREEIGVRSTEPNLIPSGPIDSDTVKPNVVEANITFQKPSSTDAIKLPTIPE GNFSTLETNNGFKQEAAPAKEILDVTSFRQRAEALEGLLELSAELLEHSRLEELAIVLKP FGKAKVSPRETAIWLAKSFKGLMNDEASRSST

Transcript Sequence

Transcript ID	Zm00001d042747_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:178858472:178864409:1 gene:Zm00001d042747 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase Nek5
Sequence	GGGGCACCACAGACCACGAGCGCAGCCGCGGAGGCCGGAGACGTCGGCGACGCGCGCGCG GTCCCACCCCGTCGAGGGGACTCGGCCGGAGCGGGAGAGTCACCGCCGTGTGGACCGGCG GCTGGAGCGCTCTGCCTGTGGCCAATGTCGGTGGAGAGAGGCCCGCCAGCGGTAAGGTCC CTGTCCCGAGCGGTGGCGGTTGGTGGGAACTGTGCGCGGTGCAGTTGATAAACTTCTAGC TTTCCTGTGAGGGACGGGCGACCTTTTCCCGTGCGTGCGTGGGGTAGGTTTTCTTCAATT TTGAGCGGCGGAGCCTGCACTGAAGACTGAAGCTGCTTGAGTCACGCCTGTTCCGACGAT TTTTGCAGAAATCGCCCAGCCTACGGGACTGATTGGGCTTGAAGTTGTGGCGCGTACGAG AGATGCCTCATGCCAGAGCTTCTGTTATTAGAGACTGAAGTTCTGCAAGCGCGTGCTGCT GCTCTGGAGTTTTAGCAGCTGTGTTGAGTGGTTGGGAGCCATGGAGTCACGGATGGATCA GTACGAGGTTTTGGAGCAGATTGGTCGCGGCGCCTTTGGTGCTGCCATCCTCGTCAACCA CAAGACAGAGAAAAAGAAGTATGTGTTGAAGAAAATACGTCTTGCAAGGCAGACAGAGCG ATGCCGCAAGTCTGCTCACCAGGAGATGGCTCTTATTGCTCGCTTGCAACATCCTTACAT CGTTGAGTTCAAGGAGGCATGGGTTGAGAAGGGCTGCTATGTTTGCATTGTGACGGGATA CTGTGAAGGTGGCGATATGGCTGAATTGATGAAAAAAGCGAATGGGACATACTTCCCAGA GGAGAAACTACTGAGATGGTTTGCGCAATTGGCATTAGCTGTTGACTACTTGCATTCAAA CTTTGTTTTGCATCGAGATCTCAAGTGCTCAAACATATTTCTTACCAAAGAACAGGATAT TCGTCTTGGAGATTTTGGCCTGGCCAAGACTTTAAAGGCAGATGATCTAGCCTCTTCGGT TGTGGGAACACCAAATTATATGTGCCCAGAGTTGCTTACAGACATTCCCTATGGATTCAA GTCAGATATATGGTCTCTTGGATGTTGTATGTATGAGATGGCTGCTCATCGACCTGCTTT CAAGGCTTTTGATATGGCTGGACTGATAAGTAAGATAAATCGCTCCTCCATTGGCCCTTT GCCTACTTTCTATTCTTCATCTATGAAAACACTTATCAAAAGCATGTTGAGGAAGAGTCC TGAACATCGACCTACTGCATCCGAGATTATAAAAAATCCATACCTCCAACCTTATGTGAA TCAATACCGTCCATTTGCTAATATATTACATCCTGGTCGATCACCAGAGAAACCTGGCAC CGATTCACGGAGCAGTCAGAAAAGTATGTCTGGGAGTCAGTGTAGTAGCATTTCTGGAAC TGGCAGTGATATGGATAGCATACAATCAAATGAAAGAAACACGTCAGGACTAGCTTCAAG TTCCAGCAACACCATTGATACCGAGGGTGCTGAAACTACTGAACTTCAGAGACATAAAGA TACTGCTTGTCCTGGACTCAAGAGACAAGATTCATCAAAATCCGTACAAGATAATCAACA TCCTGGACATGAGAATAAGCAACCAAAGATAATTAAGAAGATACTAACAACTCTAAGAGA GGAGAGCAAATTTAGGGAAAGCAATTCTCCTGTTAGAGCTAGCCGTGTAAAGCTAAATTC ACCTAGCAATAGAGAACGCTCATCTGACGACTCAAAGCAAAGTGATATTTCCTCCAGTTC AAGGTCTAGTGAAGTTATGTCACATGAATCAGCAAATGCAAGCTGTGAACCTGTCAAACG AGGACATGCATCTCCTCCCTTGAAGCATTTGTCACCAATTGTTGAGCATTCTCCGAAGGT TAAAATTAAAGTAGATGAGCTATTACATCCACACCTTGCCAAGCAGGTTGGAGAAGTTGT TGATGCAGCTGCAGGGAAGGTTAAGAACAGAACACCGCCCATTTTTATTAAATGCACCAG TATTCCTACTCGGAGGCAAGGAGTAGCAAGTCCAAGCCGTCAACACACTGGGGTAAAGCG AGCTCACAATAAGGTCATGGCAGAGCATGCAAGGAATCCTTGTCAGCATCTCCATAGTCC AAGCAACGCTCTTGTGAAACTTCCAAGTGTTCCAATGGTTCCTCCAAGTCATCTAGAAGA TCTTAAGAGAAAACCAGACAATACACGAGCAAAATCTGCTCCTCCTAGGGCTTTAGCAAC CAAGGAAGACAACAGTGCTTGCTCCAGTTCTACGATTGGTAATGCTGAAAACACCAACCA GTCTGAACCGTCTGAACCTGACTCACCAACTTATTTGGTCTCATCCTGCAAATGTTTGAT ACCTGACACTATCATACAAAAGCACGGCATAACAAGTAAAAAAAGTTCAGAAATCATCAC AACCAATTGTGAGAAGAAAATGACTAGTAATGGTGATCTTAGTCTAAGCGCAGCCATGGT GCAATCTTCTGATATTCCTGAACAAGAGTTTATTTGCAAGGATGGAATGCTCTCCAGTCA GGTGGGTCAGTGCAGTGAAACAGTTACTGTACCAAGCGATGAAGACAAGTTCACAGTGCG GGAACTGCTTTCATCAGTACCAGATCTTTGTTCCTTGGTCCCAACAACAATGATGAACAC TGAGCCAGGAAGAGGACCCACTCTCACCCAGTCATCAGAGAAACCATCGGGTCCTCATTT AAATCCTCCTCCAGTTGAGGACATTATACATGTCATAAGCCACAGCAGTTTCCATGTGAA TGGTGAGCAGGCAGTAAAAGAAACTGGATCAGAGAGCATTGATGTTGACAAACGTCTTAA CATGGTAAGAGAAGAGATAGGTGTAAGAAGCACCGAGCCAAACCTCATACCTTCTGGACC TATAGATTCTGATACGGTGAAGCCAAATGTAGTAGAAGCTAATATTACCTTTCAGAAACC ATCCAGTACAGATGCCATAAAACTGCCAACCATACCGGAAGGAAATTTTAGTACTCTGGA GACCAACAATGGGTTTAAGCAGGAAGCAGCTCCGGCTAAGGAAATACTAGATGTGACATC TTTCAGGCAGCGAGCTGAGGCTCTGGAAGGTCTCTTAGAACTTTCTGCAGAATTACTGGA ACACAGTAGGCTGGAGGAGCTTGCGATTGTTCTAAAGCCATTTGGGAAGGCCAAGGTGTC CCCTCGAGAAACAGCAATATGGTTGGCTAAAAGTTTCAAAGGCTTGATGAATGACGAAGC AAGCCGCAGTTCAACGTGAGTACGCGTAGCTTTTGTGCCACCCTTTTTACTTTGGTTGAT TTCTGCTTGTGCTCTGAAGATGCTATGGTTGTCTTGTTCATATCTGGCTTCTTGGTATCG TGTGTCGGTGTTTCCATTTCGATAGTTATTCATTCTTTACAGCACATGTTGTAAATAGCC CAGATTTGTGAACAGAAAATAATACATGCCAGAAATGGTGTTAATTTACATGGTTGAAGT AACAGAGACTAATTT