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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042736_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:178528531:178529508:1 gene:Zm00001d042736 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2C2-Dof-transcription factor 19 description:Dof zinc finger protein DOF1.2
Sequence

ATGCTGCCGTACGCGCCGGGGCCGCCGCCATCGCTGCTGCTAGACCGGCGGTCGTACAAG
CAGGGCGGCGAGGCGGCGCCCAGCTGCCCGCGCTGCGACTCGCCCAACACCAAGTTCTGC
TACTACAACAACTACAGCCTCAGCCAGCCGCGCTACTTCTGCAAGGGCTGCCGCCGCTAC
TGGACCAAGGGCGGCTCCCTGCGTAACGTGCCCGTCGGCGGCGGGTGCCGCAAGAACCGC
CGGGGCAAGTCGTCCTTGCGGTCGGCGGCGGACTCCATCGCGAGCGGCGGCGGCGGCCGC
GACGCGGCGTTCGGCCACCGGTTCCCGGGCCCTGTCCGCCCCGACCTGGTCCTGGAAGGC
ATGGTGGGCAATCACCCGTCCAACCCAGCTGGCCAGGCGGCGATGCCCGGCGGCGTGCCC
GCTGCGGCTGATGGCTCCACCATTGATCTCGCAATGCTGTACGCCAAGTTCCTCAACCAC
CCGCCGGCGGAGGAAGGCGTCGGGGCCGTGACGCCGCCGGAGTCGGCAGGGCAGGTCGAC
GAGGCGTTCGGCGCGTCCAGTGACCTGATGAGCCCTGGTGCTCTGGCGCCGGTGCAGTTC
GATCCGTGCCAGGACGGGTTCGGTGAGTGGTCTGGCGTGCCAGTCAGCAGCGCTGGCCCC
TCGAGTACGGCTAGTACTACCGCCGCAACCACCATGCTGTGCACTGACGTGAGCGTGCAA
GCTGCATTCGGCGAGCTCAACTTCGCCATGGACCAGAACTGCTTCGACTCGCTAGGGTTA
CCCACGGACGACGTCGGCAACCTCTCGTCGTCGTGGTGTTCGATCGTGCCAGGCTTGTCG
ACGTTAGAGGACGCCAAGTATGACTTGGATTCGTTCCCAGATGACGCCCTCAGCCTTCAC
GACGAGGGCATGATTAGCGGGACTGATCATGATTGGAGCGTGGATTGCCAAGGATTGGAG
ACTCTCTACATGCCGTAA

Peptide Sequence

PEP ID

Zm00001d042736_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:178528531:178529508:1 gene:Zm00001d042736 transcript:Zm00001d042736_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2C2-Dof-transcription factor 19 description:Dof zinc finger protein DOF1.2
Sequence

MLPYAPGPPPSLLLDRRSYKQGGEAAPSCPRCDSPNTKFCYYNNYSLSQPRYFCKGCRRY
WTKGGSLRNVPVGGGCRKNRRGKSSLRSAADSIASGGGGRDAAFGHRFPGPVRPDLVLEG
MVGNHPSNPAGQAAMPGGVPAAADGSTIDLAMLYAKFLNHPPAEEGVGAVTPPESAGQVD
EAFGASSDLMSPGALAPVQFDPCQDGFGEWSGVPVSSAGPSSTASTTAATTMLCTDVSVQ
AAFGELNFAMDQNCFDSLGLPTDDVGNLSSSWCSIVPGLSTLEDAKYDLDSFPDDALSLH
DEGMISGTDHDWSVDCQGLETLYMP

Transcript Sequence

Transcript ID

Zm00001d042736_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:178528531:178529508:1 gene:Zm00001d042736 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2C2-Dof-transcription factor 19 description:Dof zinc finger protein DOF1.2
Sequence

ATGCTGCCGTACGCGCCGGGGCCGCCGCCATCGCTGCTGCTAGACCGGCGGTCGTACAAG
CAGGGCGGCGAGGCGGCGCCCAGCTGCCCGCGCTGCGACTCGCCCAACACCAAGTTCTGC
TACTACAACAACTACAGCCTCAGCCAGCCGCGCTACTTCTGCAAGGGCTGCCGCCGCTAC
TGGACCAAGGGCGGCTCCCTGCGTAACGTGCCCGTCGGCGGCGGGTGCCGCAAGAACCGC
CGGGGCAAGTCGTCCTTGCGGTCGGCGGCGGACTCCATCGCGAGCGGCGGCGGCGGCCGC
GACGCGGCGTTCGGCCACCGGTTCCCGGGCCCTGTCCGCCCCGACCTGGTCCTGGAAGGC
ATGGTGGGCAATCACCCGTCCAACCCAGCTGGCCAGGCGGCGATGCCCGGCGGCGTGCCC
GCTGCGGCTGATGGCTCCACCATTGATCTCGCAATGCTGTACGCCAAGTTCCTCAACCAC
CCGCCGGCGGAGGAAGGCGTCGGGGCCGTGACGCCGCCGGAGTCGGCAGGGCAGGTCGAC
GAGGCGTTCGGCGCGTCCAGTGACCTGATGAGCCCTGGTGCTCTGGCGCCGGTGCAGTTC
GATCCGTGCCAGGACGGGTTCGGTGAGTGGTCTGGCGTGCCAGTCAGCAGCGCTGGCCCC
TCGAGTACGGCTAGTACTACCGCCGCAACCACCATGCTGTGCACTGACGTGAGCGTGCAA
GCTGCATTCGGCGAGCTCAACTTCGCCATGGACCAGAACTGCTTCGACTCGCTAGGGTTA
CCCACGGACGACGTCGGCAACCTCTCGTCGTCGTGGTGTTCGATCGTGCCAGGCTTGTCG
ACGTTAGAGGACGCCAAGTATGACTTGGATTCGTTCCCAGATGACGCCCTCAGCCTTCAC
GACGAGGGCATGATTAGCGGGACTGATCATGATTGGAGCGTGGATTGCCAAGGATTGGAG
ACTCTCTACATGCCGTAA