Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042723_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:178231343:178234426:1 gene:Zm00001d042723 gene_biotype:protein_coding transcript_biotype:protein_coding description:Omega-hydroxypalmitate O-feruloyl transferase
Sequence

ATGGTTGCTGACATGAAGGAGAACGGCGGCGCGGTGTTGGCGGCGGGCGAGAAGGCGCCG
CAGGTGGTCGTCAAGCGCGGCGAGCCGACGCTGGTGCCGCCGGCGGAGGCGACGCCGACG
GGCGGGCAGTACTACCTGTCCAACCTGGACCAGAACATCGCGGTGATCGTGCAGACGGTG
TACTGCTACAAGCCCAGCGGCGGCGGCGGCGACGTGGCGGCCGCGCTCCGCGGCGCGCTG
GCGCGCGTGCTGGTGCACTACTACCCGCTGGCGGGGCGGCTGGGCGTAAGCCCGGAGATG
AAGCTGACCGTGGAGCTGACCGGCGAGGGCGCCGTGTTCGTGGAGGCCGACGCCGCCTGC
GAACTCGCCACCGTCGGCGACCTCACCAAGCCCGACCCCGCCGCGCTCGGCCAGCTCGTC
TACTCCGTCCCCGGCGCCAAGCACATCCTCGAGATGCCTCCCATGACCGCGCAGGTGACA
AGGTTCAAGTGTGGGGGCTTCGCGCTTGGCCTGGCCATGAACCACTGCATGTTCGACGGC
ATCGGCGCCATGGAGTTCGTCAACTCGTGGGCCGAGACGGCGCGCGGCGTCGCTGAGCTC
ACCGTGCCGCCGTTCCTGGACCGCGGCGTCCTGAAGGCGCGCGACCCGCCGGTGCACACC
TTCCCGCACCACGAGTTCGCCGAGATCCCCGACGTCTCCGACACGGCGGCGCTCTACGGC
GCGCAGGAGCTGCAGTACCGCTCCTTCTGCTTCGACCCGGACCGGCTGGAGCGCGTCCGC
GGGCTGGCGCTTGCCGACGGCGCCCTCGGCCGCTGCACCACCTTCGAGGCGCTGTCGGGG
CTCGTGTGGCGCGCGCGCACCAAGGCGCTCGGGCTGGCGCCCGGGCAGCGCACGAAGCTG
CTGTTCGCCGTGGACGGACGGCGCCGGTTCGTGCCGCCGCTCCCGCGGGGCTACTTCGGC
AACGGCATCGTGCTGACCAACGCCCTGGCCACGGCCGGCGAGCTGCTGTCCGCGCCCGTG
TCGCGCGCAGCCGGGCTGGTGCAGGAGGCCGTGCGGATGGTGACTGACGACTACATGCGG
TCGGCGGTGGACTACTTCGAGGCGACGCGGGCCCGGCCGTCGCTGGCGTCCACGCTGCTC
ATCACCACGTGGTCGCGCCTCGAGTTCCACGGCGCCGACTTCGGGTGGGGCGAGCCCGTC
ATGTCGGGCCCAGTCACGCTGCCGGAGAAGGAGGTCATCCTCTTCCTCGCACACGGCAAA
GAGAGGAAGAGCATCAACGTGCTGCTCGGCCTGCCAGCCACCGCGATGGACGCCTTCCAA
GAGCTCGTGGACGAGATATGA

Peptide Sequence

PEP ID

Zm00001d042723_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:178231343:178234426:1 gene:Zm00001d042723 transcript:Zm00001d042723_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Omega-hydroxypalmitate O-feruloyl transferase
Sequence

MVADMKENGGAVLAAGEKAPQVVVKRGEPTLVPPAEATPTGGQYYLSNLDQNIAVIVQTV
YCYKPSGGGGDVAAALRGALARVLVHYYPLAGRLGVSPEMKLTVELTGEGAVFVEADAAC
ELATVGDLTKPDPAALGQLVYSVPGAKHILEMPPMTAQVTRFKCGGFALGLAMNHCMFDG
IGAMEFVNSWAETARGVAELTVPPFLDRGVLKARDPPVHTFPHHEFAEIPDVSDTAALYG
AQELQYRSFCFDPDRLERVRGLALADGALGRCTTFEALSGLVWRARTKALGLAPGQRTKL
LFAVDGRRRFVPPLPRGYFGNGIVLTNALATAGELLSAPVSRAAGLVQEAVRMVTDDYMR
SAVDYFEATRARPSLASTLLITTWSRLEFHGADFGWGEPVMSGPVTLPEKEVILFLAHGK
ERKSINVLLGLPATAMDAFQELVDEI

Transcript Sequence

Transcript ID

Zm00001d042723_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:178231343:178234426:1 gene:Zm00001d042723 gene_biotype:protein_coding transcript_biotype:protein_coding description:Omega-hydroxypalmitate O-feruloyl transferase
Sequence

CTCTACTCAAATCACAAACCCCGCTACCTCTTAACTCTTCACACGCACACCGTCTCTCAG
TCTCAGACCCACGTCGTCAACCATGGTTGCTGACATGAAGGAGAACGGCGGCGCGGTGTT
GGCGGCGGGCGAGAAGGCGCCGCAGGTGGTCGTCAAGCGCGGCGAGCCGACGCTGGTGCC
GCCGGCGGAGGCGACGCCGACGGGCGGGCAGTACTACCTGTCCAACCTGGACCAGAACAT
CGCGGTGATCGTGCAGACGGTGTACTGCTACAAGCCCAGCGGCGGCGGCGGCGACGTGGC
GGCCGCGCTCCGCGGCGCGCTGGCGCGCGTGCTGGTGCACTACTACCCGCTGGCGGGGCG
GCTGGGCGTAAGCCCGGAGATGAAGCTGACCGTGGAGCTGACCGGCGAGGGCGCCGTGTT
CGTGGAGGCCGACGCCGCCTGCGAACTCGCCACCGTCGGCGACCTCACCAAGCCCGACCC
CGCCGCGCTCGGCCAGCTCGTCTACTCCGTCCCCGGCGCCAAGCACATCCTCGAGATGCC
TCCCATGACCGCGCAGGTGACAAGGTTCAAGTGTGGGGGCTTCGCGCTTGGCCTGGCCAT
GAACCACTGCATGTTCGACGGCATCGGCGCCATGGAGTTCGTCAACTCGTGGGCCGAGAC
GGCGCGCGGCGTCGCTGAGCTCACCGTGCCGCCGTTCCTGGACCGCGGCGTCCTGAAGGC
GCGCGACCCGCCGGTGCACACCTTCCCGCACCACGAGTTCGCCGAGATCCCCGACGTCTC
CGACACGGCGGCGCTCTACGGCGCGCAGGAGCTGCAGTACCGCTCCTTCTGCTTCGACCC
GGACCGGCTGGAGCGCGTCCGCGGGCTGGCGCTTGCCGACGGCGCCCTCGGCCGCTGCAC
CACCTTCGAGGCGCTGTCGGGGCTCGTGTGGCGCGCGCGCACCAAGGCGCTCGGGCTGGC
GCCCGGGCAGCGCACGAAGCTGCTGTTCGCCGTGGACGGACGGCGCCGGTTCGTGCCGCC
GCTCCCGCGGGGCTACTTCGGCAACGGCATCGTGCTGACCAACGCCCTGGCCACGGCCGG
CGAGCTGCTGTCCGCGCCCGTGTCGCGCGCAGCCGGGCTGGTGCAGGAGGCCGTGCGGAT
GGTGACTGACGACTACATGCGGTCGGCGGTGGACTACTTCGAGGCGACGCGGGCCCGGCC
GTCGCTGGCGTCCACGCTGCTCATCACCACGTGGTCGCGCCTCGAGTTCCACGGCGCCGA
CTTCGGGTGGGGCGAGCCCGTCATGTCGGGCCCAGTCACGCTGCCGGAGAAGGAGGTCAT
CCTCTTCCTCGCACACGGCAAAGAGAGGAAGAGCATCAACGTGCTGCTCGGCCTGCCAGC
CACCGCGATGGACGCCTTCCAAGAGCTCGTGGACGAGATATGATTGATTCATCGGTGATA
TGAGCAGCGATGACGGACAGGGATGGGTTGCTATACATACATATATAATGCAGGGTGTGC
CTGCTTTGGTTTATGTACGAACGTGTTAATATTCCTTCTATGTTGGTGTCTAAGTTTAAT
GAGCATATATGAGAAATTGTTATCGATTGCAATGGTTCTGAGATGGTACACGCATAATGG
AAAATAGTGAGGTTTGTTCCTTTTA