Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042712_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:177902537:177928714:1 gene:Zm00001d042712 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTGCAGCTCCAGCCCCCTGGGTTCCTGCCCATCCCGCGCCGGCGCGTCACCGCCCGC
GGGCGTCGCGCCCGCCCTGTCATCGCCTTCAACTCCCAGTGGAAGATCCCCGACGTCGAC
ACAGATGCGGTGCGGGAGCGAGTGCGGTCTTGGATGTCTCTGGCGCGGGGCGCGATCGCC
GACGCGGGGCGCGCGGCGCGGGAGGGAGGGAGGCACAAAGAGGAGCCCGAGGGTGGGAAG
AAGAAGCAGCGGAAGGAGGTGACCGTGGAGGAGCAGGCGTTCGTTGCGGTGCCAGAGGTC
ACCGTGGAGCCGCGGGTGCCCCAGGGTTGGCTCTCGCTGGACGCCGTCGTCTCCATCGAG
CAGTTCGCCAGGTTGAATGGGTTGACGGGGAGACAGGTGCAGAGGATATTTGAATCACTT
GCTCCAGAGCATCTGCACAATGACGCTCGAAGCCTGGTTGAGTATAGCTGCTTCCGCTAC
TTGGCAAAAGATAATTCTGACTTCCATCCAAACTTGAAGGCCATTGGACTGTCAGGTACC
AAGAAACCAATGAGGCTTGACCTTACAAATCAGAATTCAAGGGCTGAAAAGACGAAAGTT
GGACCATTTGGATCCAAACTATTTGACTCTGCTGTCTCAGTTTCTTCTGGTTCAATGTCA
GATGAATGGACATTGGAGTTTGTTGATTTCAGTGGGGAGATGAGACGAGATGTGTGGCTC
GCCTTCATCAGTGAAATTATTTCAGTTTATAGATTCATTCGTGAATATGGTCCAGGTGGT
GATGATCCAGCAATACATAATGTGTATGGTGCGTACAAAGGGAAGAAAAGAGCTGTTAGT
AGTGCAGCGAACAGTATTGCAAGGCTCCAGTCTCTGCAGTTCATACGGAGATTATATGAA
GATCCAGCTAAGCTAGTGCAGTTCTCTTACCTGTCCAACGCACCATTTGGTGATGTTGTT
CTTCAGACCCTAGCAGTGAACTTTTGGGGTGGGCCTCTGACTACAAAAGCCAGATCTGCA
AATCATAGATCAACTCAGTGGCATAGATCTTCAGAGGACCCATCTAGCGGTCGCACACAT
GTTTACGACATAGATGGCAGCGTGTACTTGCGCAAGTGGATGACGTCCCCCAGCTGGACA
TCTAGCCACTCAGCCAATTTTTGGAGAAATTCTTCTGTCAAGTATGGTATAATATTGAGT
AAATCTTTAGTTGTAGCTGATAAAAACCTTGTAGAAAAGGCAATGGTTGACTGTAAAGAG
AAGAGCAAAGTAGTTGAAAGGACACAAGCGACAATAGTTGCTGCTACAATCGAAGGTATT
CCAAGTAACATTGACCTCTTCAAGGAGCTTATGCTTCCTTTTGCAATAGTGGCTGAAAAT
TTCAAGAAACTGCAACGCTGGGAAAATCCACGTTCAACATTTTGTTTTCTACTATTGGTT
CATACTGTTATTTTCAGGAACATGCTTTCTTATGTATTTCCTTTCACCTTGATGACGATG
GCCCTTTCCATGCTTGCTGTCAAAGGACTGAAAGAACAAGGCCGGTTAGGTAGATCTTTT
GGTAAAGTGACGATTAGGGATCAATCACCTTCAAACACAATTCAGAAGATCCTAGCCCTT
AAAGAGGCAATGGCCTCAGTGGAAAATTATCTCCAGAATCTGAATGTCTCCCTGCTGAAG
ATCCGCACGATCCTTCTAGCTGGCCAACCTGAGGTGACAACACAGGTCGCGTTTGTTCTC
CTAGCATCCTCAGCCGTCCTTCTTGTGTTTCCTTTCAAATATGTTCTTGCATTCTTTACA
TGTGATCTTTTCACAAGGGAGCTAGAATTCCGGAGGGAAACGGTGAGAGCCTTCATGAAC
TTCGTGAAGGAACGGTGGGAATCAATACATGCTGCCCCTGTGGTCGTGTTGCCATATGAA
GGCGCTGAAAGCAGCCCCAAGACACTCCCGGCAGAAGTTTCGGGGCAAGCAGAACCCCAG
AATGTCCAACGTGGGAGCGGTTATGTCTCCTCAAAGAATGGCATCAGCAGTTGA

Peptide Sequence

PEP ID

Zm00001d042712_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:177902537:177928714:1 gene:Zm00001d042712 transcript:Zm00001d042712_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLQLQPPGFLPIPRRRVTARGRRARPVIAFNSQWKIPDVDTDAVRERVRSWMSLARGAIA
DAGRAAREGGRHKEEPEGGKKKQRKEVTVEEQAFVAVPEVTVEPRVPQGWLSLDAVVSIE
QFARLNGLTGRQVQRIFESLAPEHLHNDARSLVEYSCFRYLAKDNSDFHPNLKAIGLSGT
KKPMRLDLTNQNSRAEKTKVGPFGSKLFDSAVSVSSGSMSDEWTLEFVDFSGEMRRDVWL
AFISEIISVYRFIREYGPGGDDPAIHNVYGAYKGKKRAVSSAANSIARLQSLQFIRRLYE
DPAKLVQFSYLSNAPFGDVVLQTLAVNFWGGPLTTKARSANHRSTQWHRSSEDPSSGRTH
VYDIDGSVYLRKWMTSPSWTSSHSANFWRNSSVKYGIILSKSLVVADKNLVEKAMVDCKE
KSKVVERTQATIVAATIEGIPSNIDLFKELMLPFAIVAENFKKLQRWENPRSTFCFLLLV
HTVIFRNMLSYVFPFTLMTMALSMLAVKGLKEQGRLGRSFGKVTIRDQSPSNTIQKILAL
KEAMASVENYLQNLNVSLLKIRTILLAGQPEVTTQVAFVLLASSAVLLVFPFKYVLAFFT
CDLFTRELEFRRETVRAFMNFVKERWESIHAAPVVVLPYEGAESSPKTLPAEVSGQAEPQ
NVQRGSGYVSSKNGISS

Transcript Sequence

Transcript ID

Zm00001d042712_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:177902537:177928714:1 gene:Zm00001d042712 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCATCGTCTCTCTGACCCTCTCCCCTCGTCCCGAACTGGCGAACAGTAAGCGAAACATAA
ACAAACAACCACGGACCCAATGAAATCGAGGGAAGGTTCACGACACGCTGCTCCCCACCA
CTAACCGCACTCGATTGAGCGCCATGCTGCAGCTCCAGCCCCCTGGGTTCCTGCCCATCC
CGCGCCGGCGCGTCACCGCCCGCGGGCGTCGCGCCCGCCCTGTCATCGCCTTCAACTCCC
AGTGGAAGATCCCCGACGTCGACACAGATGCGGTGCGGGAGCGAGTGCGGTCTTGGATGT
CTCTGGCGCGGGGCGCGATCGCCGACGCGGGGCGCGCGGCGCGGGAGGGAGGGAGGCACA
AAGAGGAGCCCGAGGGTGGGAAGAAGAAGCAGCGGAAGGAGGTGACCGTGGAGGAGCAGG
CGTTCGTTGCGGTGCCAGAGGTCACCGTGGAGCCGCGGGTGCCCCAGGGTTGGCTCTCGC
TGGACGCCGTCGTCTCCATCGAGCAGTTCGCCAGGTTGAATGGGTTGACGGGGAGACAGG
TGCAGAGGATATTTGAATCACTTGCTCCAGAGCATCTGCACAATGACGCTCGAAGCCTGG
TTGAGTATAGCTGCTTCCGCTACTTGGCAAAAGATAATTCTGACTTCCATCCAAACTTGA
AGGCCATTGGACTGTCAGGTACCAAGAAACCAATGAGGCTTGACCTTACAAATCAGAATT
CAAGGGCTGAAAAGACGAAAGTTGGACCATTTGGATCCAAACTATTTGACTCTGCTGTCT
CAGTTTCTTCTGGTTCAATGTCAGATGAATGGACATTGGAGTTTGTTGATTTCAGTGGGG
AGATGAGACGAGATGTGTGGCTCGCCTTCATCAGTGAAATTATTTCAGTTTATAGATTCA
TTCGTGAATATGGTCCAGGTGGTGATGATCCAGCAATACATAATGTGTATGGTGCGTACA
AAGGGAAGAAAAGAGCTGTTAGTAGTGCAGCGAACAGTATTGCAAGGCTCCAGTCTCTGC
AGTTCATACGGAGATTATATGAAGATCCAGCTAAGCTAGTGCAGTTCTCTTACCTGTCCA
ACGCACCATTTGGTGATGTTGTTCTTCAGACCCTAGCAGTGAACTTTTGGGGTGGGCCTC
TGACTACAAAAGCCAGATCTGCAAATCATAGATCAACTCAGTGGCATAGATCTTCAGAGG
ACCCATCTAGCGGTCGCACACATGTTTACGACATAGATGGCAGCGTGTACTTGCGCAAGT
GGATGACGTCCCCCAGCTGGACATCTAGCCACTCAGCCAATTTTTGGAGAAATTCTTCTG
TCAAGTATGGTATAATATTGAGTAAATCTTTAGTTGTAGCTGATAAAAACCTTGTAGAAA
AGGCAATGGTTGACTGTAAAGAGAAGAGCAAAGTAGTTGAAAGGACACAAGCGACAATAG
TTGCTGCTACAATCGAAGGTATTCCAAGTAACATTGACCTCTTCAAGGAGCTTATGCTTC
CTTTTGCAATAGTGGCTGAAAATTTCAAGAAACTGCAACGCTGGGAAAATCCACGTTCAA
CATTTTGTTTTCTACTATTGGTTCATACTGTTATTTTCAGGAACATGCTTTCTTATGTAT
TTCCTTTCACCTTGATGACGATGGCCCTTTCCATGCTTGCTGTCAAAGGACTGAAAGAAC
AAGGCCGGTTAGGTAGATCTTTTGGTAAAGTGACGATTAGGGATCAATCACCTTCAAACA
CAATTCAGAAGATCCTAGCCCTTAAAGAGGCAATGGCCTCAGTGGAAAATTATCTCCAGA
ATCTGAATGTCTCCCTGCTGAAGATCCGCACGATCCTTCTAGCTGGCCAACCTGAGGTGA
CAACACAGGTCGCGTTTGTTCTCCTAGCATCCTCAGCCGTCCTTCTTGTGTTTCCTTTCA
AATATGTTCTTGCATTCTTTACATGTGATCTTTTCACAAGGGAGCTAGAATTCCGGAGGG
AAACGGTGAGAGCCTTCATGAACTTCGTGAAGGAACGGTGGGAATCAATACATGCTGCCC
CTGTGGTCGTGTTGCCATATGAAGGCGCTGAAAGCAGCCCCAAGACACTCCCGGCAGAAG
TTTCGGGGCAAGCAGAACCCCAGAATGTCCAACGTGGGAGCGGTTATGTCTCCTCAAAGA
ATGGCATCAGCAGTTGATCCGTGCAGCTTTGAGGGCATCTTGCTGTAAACTTGTGTACAG
TTAAACTTGTATAGATTACTCGAGAGGGCAGATTAGGTATAGATCGTACCAATTGGTGGA
TTTTGCAGAGTAATGTTCCATTTACGTCGTAGTGAAGATAACTAGCGTAGACGAGAACTT
AGGAGAGAATTTTGGGTCCAATTCGCTGTCTTGGATCGTTGGTCTGGCAGTTAGGGATGT
CAAGTAAGAATTTTGGGTCCAATTCACGGTCTTGGATCGTTGGTCTGACAGTTAGGAATG
TCAAGTTGACAGATGCATGTATTCATAATCCGTTTGGAACGCTGCAGGATCGGGGAATAT
ATATCAGCGGATGTGCCTAGACAGACAAGTGATCTGGGACGTGGTTTCAGTTCAGGCTGC
AGAGAAAGCTAATGAGATATCCTGCACCTAGAAACCTGCTTAAGTGCGTTGATGGCATCC
TGTCCGTGTACAGCGAACGGCCGTTGATTCCCAAAGGACAGCAGCAAACACATTCGGGGT
CTCGCATATGACCGCTCAGCATGGCACTAGGAGGACTGATTGGCACGGCACGGTAAGAAC
ATGGCACGACAAATGTGCCTCTTAGCCGTGTCATGCCAGTACCGGCCCTAAGCATTACAT
ATGTAAACCCTAAAATATAATTTTAAGAAGTTTAGGTAGCTCTTTTGTTCTTTGACAATT
AATATTAGAGTTTATA