Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042694_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:177266069:177275631:1 gene:Zm00001d042694 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative ion channel protein POLLUX

Sequence

ATGGCGGAGAGCGATGGTGGCAGCGAGGCGCAGAGTCCGAGCCCTGATCCAAGGTCCGGG
GACGGGGCGAACCCTGACCCGCGCCCGCCGCGGCCGCAGCTCACCAAGTCGCGCACCATC
TCTGGTTCTGTTGCAGCCTCCATATTGGCCGCTGATAGGGTAGCAGGAGGAGGAGGCGGA
AGCGGCGGAGGCGGTCTAAGGGACAGCATCCTCGTTCGCCGCTCCTCCACGGCGCCCCTC
CCGCCGTATACGGCGTCAGCGGCGGGGGCGTCCTCGGCGCCGCGGCGGCTCACCGTCGCC
GTGGACGACCCCTCCTACGCGGCACCCAACGGCGGCGTGCTTGACCGGGACTGGTGCTAC
CCGTCGTTCCTAGGTCCGCACGCCTCGCGCCCCCGCCCGCCGCGGCAGCAGCAGACCGCG
ACGACTACCGAACGCCGAAGCGCTAACCCCACCGTGCCGGTGCCGCCGAGGGTGGCGGTG
TCGCAGCGGGAGGAGGAGAAGAGCCTGGCCTCCGTGGTGAAGCGCCCGGCGCTGCTTGAG
GAGCGGAGGACGCCTCCTCCTACGCTCCCGCCCCCACGCGCTCCGCGATTTGATCTCTCT
CCGTATCTCTCACTCCTGCTGGTCATAACTATCGCAAGCTCTACCCTCGCTGTTTGGCAA
TGGATAAAAGTTATGGGCCTCCAGGAAAAGATCAGATCATGCAGCGAGGCCAATGCTGGG
GACCGTGATGGTACCGAGAAGGTGTCTTGGATTGACAGGGACCATGGCTCTGCTTTTTTT
GGTTCGCGGAGATGGAATTTAGCTCAATCTAGTACCATCTTTGCTCTTGCAATTCCTTTG
TTTCTGTTTAAGTACATTGATCTGCTCCGACGCAGACAAACAAATTCCATGAGAGGAAGA
AGTGGTGAGGAAGAAGTACCTCTCAAGAAGAGGATCGCCTACAAAGTTGATGTGTTCTTC
TCAGGACACCCATATGCCAAGCTTCTTGCCCTCCTATTAGCCACCATAATTCTCATTGCT
TTGGGTGGAATTGCGCTGTATGTTGTTAGTGGAAGTGGATTCCTGGAGGCTCTCTGGCTT
TCCTGGACTTTTGTGGCAGATTCTGGAAACCATGCCGACCAGATTGGCTTGGGGCCGAGG
ATTGTATCCGTGTCAATTAGCTCTGGAGGCATGCTGGTGTTTGCCACAATGCTTGGGCTT
GTGTCAGATGCAATATCAGAGAAGGTGGATTCTTGGCGCAAGGGAAAAAGTGAGGTGATA
GAGATCAACCACATACTAATCCTCGGATGGAGTGATAAGCTGGGCTCTCTTCTGAAGCAG
CTAGCTATAGCAAACAAGAGTATTGGTGGTGGTGTAGTTGTTGTTCTAGCTGAAAGGGAC
AAGGAAGAGATGGAGATGGACATAGCAAAGTTAGAATTTGACTTCATGGGAACATCTGTA
ATATGCAGGAGTGGCAGTCCTCTAATTCTAGCAGACTTGAAGAAGGTTTCTGTTTCTAAA
GCACGGGCCATTATTGTTTTAGCATCTGATGAAAACGCAGACCAAAGTGATGCACGGGCA
TTGCGTGTTGTGCTGAGTCTGACTGGAGTCAAGGAGGGTCTAAGAGGCCATGTTGTTGTA
GAGATGAGTGATCTTGATAATGAACCTTTAGTGAAACTGGTTGGTGGTGAACTAATTGAA
ACAGTTGTTGCCCATGACGTGATTGGACGTCTGATGATACAATGTGCACTCCAACCTGGC
CTTGCACAGATATGGGAAGACATATTGGGATTTGAAAATGCAGAGTTTTATATTAAGCAA
TGGCCAGAATTGGATGGCATGCGGTTTGGGGATGTGTTGATCTCATTTCCTGATGCCGTA
CCTTGTGGAGTCAAGGTTGCTTCAAAATCTGGAAAGATCTTGATGAATCCTGATGATGGT
TATGTTTTAAGAGAAGGAGATGAGGTCCTTGTTATTGCAGAAGATGATGATACTTATGCT
CCTGCCCCTCTACCAGAGGTGAATAAGGGTTTTCTGCCTAACATACCAACCCCTCCCAAA
TATCCAGAGAAAATTTTGTTCTGTGGTTGGCGCCGTGACATCCATGATATGATAATGGTT
CTGGAAGCATTTCTTGCTCCAGGTTCTGAATTATGGATGTTCAATGAAGTGCCGGAGAAG
GAGAGGGAGATAAAACTGACTGACGGTGGTTTGGATATAGGCGGGTTAATAAACATTAAA
CTTGTACATAAAGAAGGCAATGCTGTTATCAGGCGACACTTGGAAAGCTTGCCTCTGGAG
ACATTTGACTCTATTTTAATTCTTGCAGATGAGTCAGTAGAGGACTCCATTGTACATTCT
GATTCGCGTTCTTTGGCCACACTTCTTCTTATTCGTGACATTCAGTCTAAGCGTCTCCCA
TCGAAGGAGCTGAAGTCACCTCATCGTTACAATGGCTTCTCTCACAGTGCCTGGATTAGA
GAAATGCAACATGCATCAGACAAATCTATAATCATCAGCGAAATACTTGATTCTAGAACA
AGAAACCTTGTATCTGTCTCCAAAATCAGCGATTATGTTCTATCAAATGAGCTTGTAAGT
ATGGCACTAGCAATGGTAGCGGAAGACAAACAAATAAACAGAGTTCTTGAAGAACTTTTT
GCTGAGGAGGGAAATGAGATGTGCATTCGGTCTGCTGAATTTTACCTTTATGAGCAAGAG
GAATTGAGTTTCTTTGATATTATGGTTAGGGCGCGTGAGAGAGATGAGATTGTGATTGGC
TACCGTCTTGCTAACACCGACCAGGCTATCATTAACCCAGAATATAAGTCTCAGATTAGG
AAGTGGTCACTAGATGATGTCTTTGTTGTCATCTCAAAAGGTGACTAA

Peptide Sequence

PEP ID

Zm00001d042694_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:177266069:177275631:1 gene:Zm00001d042694 transcript:Zm00001d042694_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative ion channel protein POLLUX

Sequence

MAESDGGSEAQSPSPDPRSGDGANPDPRPPRPQLTKSRTISGSVAASILAADRVAGGGGG
SGGGGLRDSILVRRSSTAPLPPYTASAAGASSAPRRLTVAVDDPSYAAPNGGVLDRDWCY
PSFLGPHASRPRPPRQQQTATTTERRSANPTVPVPPRVAVSQREEEKSLASVVKRPALLE
ERRTPPPTLPPPRAPRFDLSPYLSLLLVITIASSTLAVWQWIKVMGLQEKIRSCSEANAG
DRDGTEKVSWIDRDHGSAFFGSRRWNLAQSSTIFALAIPLFLFKYIDLLRRRQTNSMRGR
SGEEEVPLKKRIAYKVDVFFSGHPYAKLLALLLATIILIALGGIALYVVSGSGFLEALWL
SWTFVADSGNHADQIGLGPRIVSVSISSGGMLVFATMLGLVSDAISEKVDSWRKGKSEVI
EINHILILGWSDKLGSLLKQLAIANKSIGGGVVVVLAERDKEEMEMDIAKLEFDFMGTSV
ICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVV
EMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKQ
WPELDGMRFGDVLISFPDAVPCGVKVASKSGKILMNPDDGYVLREGDEVLVIAEDDDTYA
PAPLPEVNKGFLPNIPTPPKYPEKILFCGWRRDIHDMIMVLEAFLAPGSELWMFNEVPEK
EREIKLTDGGLDIGGLINIKLVHKEGNAVIRRHLESLPLETFDSILILADESVEDSIVHS
DSRSLATLLLIRDIQSKRLPSKELKSPHRYNGFSHSAWIREMQHASDKSIIISEILDSRT
RNLVSVSKISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIRSAEFYLYEQE
ELSFFDIMVRARERDEIVIGYRLANTDQAIINPEYKSQIRKWSLDDVFVVISKGD

Transcript Sequence

Transcript ID

Zm00001d042694_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:177266069:177275631:1 gene:Zm00001d042694 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative ion channel protein POLLUX

Sequence

GGGGCAGAGGCGCAGAGCGGCACGGGCGATCACGCGATCGGCCGCCTTTGCGGCCGCGCA
CGTGACTCCCGTGCGATCGCCGCGCTGCCGTGCCGCCTGGTTGTGCCTCCTCCTGTTCGG
CTTCGGCCGTTCCCTGCTTGATCTCGACTTGCTGTAGCGGTTTACAGTTACGTGTGCCTC
CATTAGCTAAAGGCCAAACGGCTCCGCATCGCGCGGTGGGTGTGTCTTACAGGTAGGGAC
GCTAAGAGGTGGCCCGCGGGTCAGAGTCGCTGGTGAAGTGGGGTTAGTGGGGGCGGGTAT
GTAATCATCGCAGGGTTAAAGGGCCATTTGGGTGTGGTTTATTATTACCACGAGGGGAGG
GGAGCTCGAGCTCGCTGCTAGTGCTAATGGCGGAGAGCGATGGTGGCAGCGAGGCGCAGA
GTCCGAGCCCTGATCCAAGGTCCGGGGACGGGGCGAACCCTGACCCGCGCCCGCCGCGGC
CGCAGCTCACCAAGTCGCGCACCATCTCTGGTTCTGTTGCAGCCTCCATATTGGCCGCTG
ATAGGGTAGCAGGAGGAGGAGGCGGAAGCGGCGGAGGCGGTCTAAGGGACAGCATCCTCG
TTCGCCGCTCCTCCACGGCGCCCCTCCCGCCGTATACGGCGTCAGCGGCGGGGGCGTCCT
CGGCGCCGCGGCGGCTCACCGTCGCCGTGGACGACCCCTCCTACGCGGCACCCAACGGCG
GCGTGCTTGACCGGGACTGGTGCTACCCGTCGTTCCTAGGTCCGCACGCCTCGCGCCCCC
GCCCGCCGCGGCAGCAGCAGACCGCGACGACTACCGAACGCCGAAGCGCTAACCCCACCG
TGCCGGTGCCGCCGAGGGTGGCGGTGTCGCAGCGGGAGGAGGAGAAGAGCCTGGCCTCCG
TGGTGAAGCGCCCGGCGCTGCTTGAGGAGCGGAGGACGCCTCCTCCTACGCTCCCGCCCC
CACGCGCTCCGCGATTTGATCTCTCTCCGTATCTCTCACTCCTGCTGGTCATAACTATCG
CAAGCTCTACCCTCGCTGTTTGGCAATGGATAAAAGTTATGGGCCTCCAGGAAAAGATCA
GATCATGCAGCGAGGCCAATGCTGGGGACCGTGATGGTACCGAGAAGGTGTCTTGGATTG
ACAGGGACCATGGCTCTGCTTTTTTTGGTTCGCGGAGATGGAATTTAGCTCAATCTAGTA
CCATCTTTGCTCTTGCAATTCCTTTGTTTCTGTTTAAGTACATTGATCTGCTCCGACGCA
GACAAACAAATTCCATGAGAGGAAGAAGTGGTGAGGAAGAAGTACCTCTCAAGAAGAGGA
TCGCCTACAAAGTTGATGTGTTCTTCTCAGGACACCCATATGCCAAGCTTCTTGCCCTCC
TATTAGCCACCATAATTCTCATTGCTTTGGGTGGAATTGCGCTGTATGTTGTTAGTGGAA
GTGGATTCCTGGAGGCTCTCTGGCTTTCCTGGACTTTTGTGGCAGATTCTGGAAACCATG
CCGACCAGATTGGCTTGGGGCCGAGGATTGTATCCGTGTCAATTAGCTCTGGAGGCATGC
TGGTGTTTGCCACAATGCTTGGGCTTGTGTCAGATGCAATATCAGAGAAGGTGGATTCTT
GGCGCAAGGGAAAAAGTGAGGTGATAGAGATCAACCACATACTAATCCTCGGATGGAGTG
ATAAGCTGGGCTCTCTTCTGAAGCAGCTAGCTATAGCAAACAAGAGTATTGGTGGTGGTG
TAGTTGTTGTTCTAGCTGAAAGGGACAAGGAAGAGATGGAGATGGACATAGCAAAGTTAG
AATTTGACTTCATGGGAACATCTGTAATATGCAGGAGTGGCAGTCCTCTAATTCTAGCAG
ACTTGAAGAAGGTTTCTGTTTCTAAAGCACGGGCCATTATTGTTTTAGCATCTGATGAAA
ACGCAGACCAAAGTGATGCACGGGCATTGCGTGTTGTGCTGAGTCTGACTGGAGTCAAGG
AGGGTCTAAGAGGCCATGTTGTTGTAGAGATGAGTGATCTTGATAATGAACCTTTAGTGA
AACTGGTTGGTGGTGAACTAATTGAAACAGTTGTTGCCCATGACGTGATTGGACGTCTGA
TGATACAATGTGCACTCCAACCTGGCCTTGCACAGATATGGGAAGACATATTGGGATTTG
AAAATGCAGAGTTTTATATTAAGCAATGGCCAGAATTGGATGGCATGCGGTTTGGGGATG
TGTTGATCTCATTTCCTGATGCCGTACCTTGTGGAGTCAAGGTTGCTTCAAAATCTGGAA
AGATCTTGATGAATCCTGATGATGGTTATGTTTTAAGAGAAGGAGATGAGGTCCTTGTTA
TTGCAGAAGATGATGATACTTATGCTCCTGCCCCTCTACCAGAGGTGAATAAGGGTTTTC
TGCCTAACATACCAACCCCTCCCAAATATCCAGAGAAAATTTTGTTCTGTGGTTGGCGCC
GTGACATCCATGATATGATAATGGTTCTGGAAGCATTTCTTGCTCCAGGTTCTGAATTAT
GGATGTTCAATGAAGTGCCGGAGAAGGAGAGGGAGATAAAACTGACTGACGGTGGTTTGG
ATATAGGCGGGTTAATAAACATTAAACTTGTACATAAAGAAGGCAATGCTGTTATCAGGC
GACACTTGGAAAGCTTGCCTCTGGAGACATTTGACTCTATTTTAATTCTTGCAGATGAGT
CAGTAGAGGACTCCATTGTACATTCTGATTCGCGTTCTTTGGCCACACTTCTTCTTATTC
GTGACATTCAGTCTAAGCGTCTCCCATCGAAGGAGCTGAAGTCACCTCATCGTTACAATG
GCTTCTCTCACAGTGCCTGGATTAGAGAAATGCAACATGCATCAGACAAATCTATAATCA
TCAGCGAAATACTTGATTCTAGAACAAGAAACCTTGTATCTGTCTCCAAAATCAGCGATT
ATGTTCTATCAAATGAGCTTGTAAGTATGGCACTAGCAATGGTAGCGGAAGACAAACAAA
TAAACAGAGTTCTTGAAGAACTTTTTGCTGAGGAGGGAAATGAGATGTGCATTCGGTCTG
CTGAATTTTACCTTTATGAGCAAGAGGAATTGAGTTTCTTTGATATTATGGTTAGGGCGC
GTGAGAGAGATGAGATTGTGATTGGCTACCGTCTTGCTAACACCGACCAGGCTATCATTA
ACCCAGAATATAAGTCTCAGATTAGGAAGTGGTCACTAGATGATGTCTTTGTTGTCATCT
CAAAAGGTGACTAATTTTCAGGAGCGTCACTTTTTTGTGTAAGTGTATATTCTAATGCTA
ATCCGTGCTAATTGAAATGATAACCGGTCAAACATACTGTAAAGTACAGTCCTGATCCAA
ACAGTCAGCTATGTACATGTTAAATTGTAGCATTCAACCAATCTTGGC