Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042691_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:3:177197045:177202411:-1 gene:Zm00001d042691 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair protein XRCC2 homolog
Sequence	ATGGCCGGAGAGGCGGGAAAAGACCCCCAAGCGTGGCTAGCCGCCAACGAGACGGCGTCG GCCTTCCTCTCCCGTTCACTCTCCTCGCGGCCCCCCATCACCCTCCCGCCACCACTGCAC CGCGCGCCTCTCCGCCCGGGCAACGTCGTCGAGATCGCCGGCCCGTCCAACTCTGGCAAG TCCCACCTCCTCCTCATGGCTGCAGTGCAGTGCATATTACCAAAGGAGTGGGAGGGAATC TACTTTGGGGGGCTGGGGAGGGCGGTCATGTACTTGGACTTGGACTGCCGATTTGATGTG CTACGGCTGGCTCAAATTCTGAGGAATCGTATTGCAGAGGGCTGCCGTTTAGCACACCTT AGAAATGGAGACCCTGAAAATGATGTCACTAAAGATGAGTTTCAGTGTTCTCTTCAAAAT ACACTGTTTTCTGATTGTATGCAGCGCTTCTTGTATGCTCGATGTTGCAAAAGTCCTGAA TTCATAGATGCTTTGAAGATCATGAGTTCCTACCCCTTCTCTATCCTGCCTTTGCGGTGC GGCCGACGGACATTGGCATGTCCGTGCAGCTTTGGTTCAGGTTCATTTAAAACTGTACAG TCTCAATCAAGGAGGGAAGTGTCCGGCGCTGGTATATATTTTGTTATGATAGACAGCATT GGTGCGTTCTACTGGATAGATCGTGGTTCTCAAGCTTCACGAGAGAATAAAGGGAAAACA CTGCAAAGCATTTTTGAAAGTGTTGTCCACGAGTTACGCAAGATTTTGCAACTTGAACCT GCATTGGTTTTGGTCACAAAGGCATCCGTTTATGGGGAAGGCACCACAACAGCAAATGAC TTCAATCGGGATTCTTCAAAATACATGCTGGAGGATCCTAGCGGTTTGGGATATTCAAGA CGGGAGGAAGAAAGAACTCTCTCTAATCGGGAATATATGCCATCAATATGGCAGTCTTTT GTCACACACAGGATAAACCTTCAAGTAGAAGCAGAAGTTCCCTCTGTGCTGGAAAGTGAG GTGCTTCCTTTGCATACTTCTGAGTGGGTGCAACCTTGCCTCAAAATGAAGGAGAAGTTT TCTATTATGGATGTAAGATTTTGGTATTCATATTCCTTTGGCCTGCTGCAAACATAG

Peptide Sequence

PEP ID	Zm00001d042691_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:3:177197045:177202411:-1 gene:Zm00001d042691 transcript:Zm00001d042691_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair protein XRCC2 homolog
Sequence	MAGEAGKDPQAWLAANETASAFLSRSLSSRPPITLPPPLHRAPLRPGNVVEIAGPSNSGK SHLLLMAAVQCILPKEWEGIYFGGLGRAVMYLDLDCRFDVLRLAQILRNRIAEGCRLAHL RNGDPENDVTKDEFQCSLQNTLFSDCMQRFLYARCCKSPEFIDALKIMSSYPFSILPLRC GRRTLACPCSFGSGSFKTVQSQSRREVSGAGIYFVMIDSIGAFYWIDRGSQASRENKGKT LQSIFESVVHELRKILQLEPALVLVTKASVYGEGTTTANDFNRDSSKYMLEDPSGLGYSR REEERTLSNREYMPSIWQSFVTHRINLQVEAEVPSVLESEVLPLHTSEWVQPCLKMKEKF SIMDVRFWYSYSFGLLQT

Transcript Sequence

Transcript ID	Zm00001d042691_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:177197045:177202411:-1 gene:Zm00001d042691 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair protein XRCC2 homolog
Sequence	GCAGTTCCGCTTCAAAATTCCGGTGAAAAAGGAAGACGACAGCTCCAGACCCCTAGGCCC CTAGCCATGGCCGGAGAGGCGGGAAAAGACCCCCAAGCGTGGCTAGCCGCCAACGAGACG GCGTCGGCCTTCCTCTCCCGTTCACTCTCCTCGCGGCCCCCCATCACCCTCCCGCCACCA CTGCACCGCGCGCCTCTCCGCCCGGGCAACGTCGTCGAGATCGCCGGCCCGTCCAACTCT GGCAAGTCCCACCTCCTCCTCATGGCTGCAGTGCAGTGCATATTACCAAAGGAGTGGGAG GGAATCTACTTTGGGGGGCTGGGGAGGGCGGTCATGTACTTGGACTTGGACTGCCGATTT GATGTGCTACGGCTGGCTCAAATTCTGAGGAATCGTATTGCAGAGGGCTGCCGTTTAGCA CACCTTAGAAATGGAGACCCTGAAAATGATGTCACTAAAGATGAGTTTCAGTGTTCTCTT CAAAATACACTGTTTTCTGATTGTATGCAGCGCTTCTTGTATGCTCGATGTTGCAAAAGT CCTGAATTCATAGATGCTTTGAAGATCATGAGTTCCTACCCCTTCTCTATCCTGCCTTTG CGGTGCGGCCGACGGACATTGGCATGTCCGTGCAGCTTTGGTTCAGGTTCATTTAAAACT GTACAGTCTCAATCAAGGAGGGAAGTGTCCGGCGCTGGTATATATTTTGTTATGATAGAC AGCATTGGTGCGTTCTACTGGATAGATCGTGGTTCTCAAGCTTCACGAGAGAATAAAGGG AAAACACTGCAAAGCATTTTTGAAAGTGTTGTCCACGAGTTACGCAAGATTTTGCAACTT GAACCTGCATTGGTTTTGGTCACAAAGGCATCCGTTTATGGGGAAGGCACCACAACAGCA AATGACTTCAATCGGGATTCTTCAAAATACATGCTGGAGGATCCTAGCGGTTTGGGATAT TCAAGACGGGAGGAAGAAAGAACTCTCTCTAATCGGGAATATATGCCATCAATATGGCAG TCTTTTGTCACACACAGGATAAACCTTCAAGTAGAAGCAGAAGTTCCCTCTGTGCTGGAA AGTGAGGTGCTTCCTTTGCATACTTCTGAGTGGGTGCAACCTTGCCTCAAAATGAAGGAG AAGTTTTCTATTATGGATGTAAGATTTTGGTATTCATATTCCTTTGGCCTGCTGCAAACA TAGCAGTTTACTAATACAATTTGAACTTTTT