Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042690_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:3:177035058:177047972:-1 gene:Zm00001d042690 gene_biotype:protein_coding transcript_biotype:protein_coding description:Embryogenesis-associated protein EMB8

Sequence

ATGTCGGAGGCCGTCGCCGCAGGCGAGTCGCCCGTCGAGCTGCTGCTCCGCGCGGCGGCG
ATGGTGCCCGCAGAGCGCTACGCGCTGGCCGCCATCATCGTCGTGTCCGTCTTTCTGTAC
CGCTTCCTCGAGCTCCATGTTATCGGCGACATCCTCCGCGGCTTCCGGGGCGGCCGCGTC
GAGCTCACCTTCCACCCCGCCTCGGAGATCTACCACCGCGTCGCGTCCAAGTGCCGCTTG
CTCCACGGCAGGTATCTGGCGACACCATGGCTGGCGAGCCCGCATTTGCAGACATTGTTC
CTGGGCATTTACGGGACGCCGCCTTCATTCACATACAAGAGACAGTTGTACACTGTTCGT
GATGGTGGAACCATTGCTTTGGATTGGCTGTTCGCATCTGATTTGGAAGTTGCAGATGGA
TTCATTTCGAAAGACGCTTCAACACCCCTTGTAGTTGTGGTTCCTGGATTAACTAGCGAT
TCTGCTGCTGCTTATGTAAAACACTTGGTTTACTCCATGGCAAGCAAAGGATGGAATGTT
GTTGTAAGCAACCACAGAGGTCTTGGTGGTGTGTCCATTACTTCAGATTGCTTCTACAAT
GGTGGTTGGACAGAAGATGTCCGAGAGGTCATTACACACCTGCATCACAGATATCCGAAA
ACCACACTGTTTTGCATTGGTACAAGCATAGGTGCCAATATTGTGGTCAAGTATCTTGGA
GAAGAAGGCGAGAATACTCCTATAGCGGGTGCAGTATCTATTTGTTCTCCATGGGATCTG
TTGATAGGTGACAGATTTATTTCCCGCAAGCTTGTACAGCGTATTTACGACAAAGCACTT
GCAATTGGTCTGAAGGGCTATGCAAAATTGTAA

Peptide Sequence

PEP ID

Zm00001d042690_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:3:177035058:177047972:-1 gene:Zm00001d042690 transcript:Zm00001d042690_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Embryogenesis-associated protein EMB8

Sequence

MSEAVAAGESPVELLLRAAAMVPAERYALAAIIVVSVFLYRFLELHVIGDILRGFRGGRV
ELTFHPASEIYHRVASKCRLLHGRYLATPWLASPHLQTLFLGIYGTPPSFTYKRQLYTVR
DGGTIALDWLFASDLEVADGFISKDASTPLVVVVPGLTSDSAAAYVKHLVYSMASKGWNV
VVSNHRGLGGVSITSDCFYNGGWTEDVREVITHLHHRYPKTTLFCIGTSIGANIVVKYLG
EEGENTPIAGAVSICSPWDLLIGDRFISRKLVQRIYDKALAIGLKGYAKL

Transcript Sequence

Transcript ID

Zm00001d042690_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:177035058:177047972:-1 gene:Zm00001d042690 gene_biotype:protein_coding transcript_biotype:protein_coding description:Embryogenesis-associated protein EMB8

Sequence

GGCCCGAACATCGGATCTCCTGGTAGCTCACGTCGTCCCGCTTCGCGAGTCCCCGACCCC
GAGCGGCCGAGCCCGACGACGTCAACGTTGTGGCCCCGACATGCATGCCCCACCCGCGCC
ACCGTCACTTCAAAAGACAAGGGCGTAATAATCGTCCAGGCCAGGGGACCAGGAAAGCGC
TCTTTGCATCTCCGCCGGTCCGTCCACGGTGTGAATCGCGTGGTCCGCCGAACCTCAGAA
TAGCCGCTCGAACCGCTTCATAACTCCCACCGCACCGGTCGCCCCGGCGCGCCGGCGAGG
TGACCTACTGACCTCGACGAGCGCGCGACGTTGACCGGGGCGTGCATCCGGCCGCATCTT
GTCCTCGTTCCTTACGCAGAGGAGCGCCGCTCCAAAATCGCAGAACGCCAAGGCGGGCGT
AGCGAAGGATGTCGGAGGCCGTCGCCGCAGGCGAGTCGCCCGTCGAGCTGCTGCTCCGCG
CGGCGGCGATGGTGCCCGCAGAGCGCTACGCGCTGGCCGCCATCATCGTCGTGTCCGTCT
TTCTGTACCGCTTCCTCGAGCTCCATGTTATCGGCGACATCCTCCGCGGCTTCCGGGGCG
GCCGCGTCGAGCTCACCTTCCACCCCGCCTCGGAGATCTACCACCGCGTCGCGTCCAAGT
GCCGCTTGCTCCACGGCAGGTATCTGGCGACACCATGGCTGGCGAGCCCGCATTTGCAGA
CATTGTTCCTGGGCATTTACGGGACGCCGCCTTCATTCACATACAAGAGACAGTTGTACA
CTGTTCGTGATGGTGGAACCATTGCTTTGGATTGGCTGTTCGCATCTGATTTGGAAGTTG
CAGATGGATTCATTTCGAAAGACGCTTCAACACCCCTTGTAGTTGTGGTTCCTGGATTAA
CTAGCGATTCTGCTGCTGCTTATGTAAAACACTTGGTTTACTCCATGGCAAGCAAAGGAT
GGAATGTTGTTGTAAGCAACCACAGAGGTCTTGGTGGTGTGTCCATTACTTCAGATTGCT
TCTACAATGGTGGTTGGACAGAAGATGTCCGAGAGGTCATTACACACCTGCATCACAGAT
ATCCGAAAACCACACTGTTTTGCATTGGTACAAGCATAGGTGCCAATATTGTGGTCAAGT
ATCTTGGAGAAGAAGGCGAGAATACTCCTATAGCGGGTGCAGTATCTATTTGTTCTCCAT
GGGATCTGTTGATAGGTGACAGATTTATTTCCCGCAAGCTTGTACAGCGTATTTACGACA
AAGCACTTGCAATTGGTCTGAAGGGCTATGCAAAATTGTAAGTTTTCCTCACTAAACTGT
GTACACTCTATACATTTATACGAGACTCTACTTTTATTCTACAGAATCGCCACATCTTAA
AAGGTACACCGGAATCTGGAAACTTCAATTTATCTCTTGAGCATAGCAGTATATATGCTT
GGAAAGGTCTTGTATTGTGTAATACTCCGTCCATCCCAAATTAGAATTCGTTTGACTTTT
TTGTGCCACGTTTGACCGGCTCGTCCTATTCATTTTTTTTGCAAAAAATAAAAAATTCAA
AGCCACATTTAAAGTATATTATATGCTAAACAATATCACAACAAAAATTAACTATAATTA
TGAATATTTTTGAATAAGACGAGCCGGCCAAACTTATGTTAAAAAAGTCAAACGAATTAT
AAATTGAAACGGAGGGAGTAGTTGTGAACAAAAAGTGACTGGACCATAGTTTTATAGGGC
GATGTACAAGTAAATGCGATATATTTCCATGGTCAAAGTATTTCTGGATGGTTGGAATAT
TCAAATGTAATGATTCTAATACCTGTCTAGAGCCTGAAACTGAACATATCTAAGAGTGTT
CTTATATGCTTTCTGCTTGTGACTTGTGAGAGCTGTGTATCATTATACTAATTAAATAAA
GAAGAATAAAAGGGTGGTAGGAGCTCTTACAGTCACCCACGCCCCAAAGTTTCTTAGATT
ACATGGGCACACTTTACTATAAATAAAAAAGCGCTTGACCTAAGCACCTAACAGCCTCCT
GGTGCTAGAGCATCCAGGTAGGAACTACCACAAGTCCCAGCCATACCACAACTGCATCTC
CTTGCTGGTGAGCAAAAAAAGCTCCAGCAACGTTTGGTGGAGCTCCATCAAAGACACATC
TGTTGAGATGATTCCAAAGTGGCCTTGCTGTGCCTGGACGGTGACCATATCATTAGCTCT
AGACATGCCAGTCATCAAAGGACGTCTCTCCAGGCTGCGGTGGAAGGACCTGCAGGCTGA
ATCAGAACTGTTATGCAAAGACACTGGTGATGAGCAGATGATGGATCGTCTCTTCAGCCT
GATCACAGTCTGGGCATCGAGCATGGTGTATTAGACCCCGTCATGCAAGTCGATTAGCAG
TCCAACACCTGTTATGTGCGACCAACCACATGAAGAAATGGCATTTGTGTGTTGCCCATG
GTTTCCCTATTGGCTCCCATGGCCTAAACAGGACAGCACACTGAATAGACCCTCATAAAC
CAACTTAGCTGAGTATTCTCCTTTTTTTTCCGAAACGCAGGAGGACTACGTGACATTATA
TTAAGAGGAGAAAAAGGGTCCTAACGGACCAGTACAAAACTAGAGGCCTCCTTACTGCGG
CCACCAACAAGCGTACAAAAACTCATCCATGACTAACTACACCAAAGAAAAACGACCAAA
GCCTAGACTCCAACAGATGAGAGCAGTGATTCTGCTCCACCATCTAATATGTTTTTCTTC
GCATCTGTTATTTTGGCACAAGTTTTTTTGGTTCTCAGAAAGAAACAGTTTGAAAAGGTT
CAATTGTACGAAATGAATTTCTAGATCCTGGGATTTCTTACCATCAAGTGAGAAAAAGCC
TCGATTTCTGGAATTCCTTATTTCTATCTCATGCAAAAGAAGAGGATCCAAGGCAAAAAC
GAGAACAATAAAAGGAAGAGTCGTCAGCTTCTGGAACAAGACTTTGTAGACCCAATTTAG
AGAATAAGAGAAACCAGATTTCTCTAGTGAAGATGCAAGTAGCCAGACAGTGTTGAATTG
TCTCCACAGCCTGATCAGAAAGTGGGCAAGAATTAGGGTGGGACAGTCCTCTTTTTGCAA
GCAGCTGAGTATTCTCCTGAAACTAAGAGGCGCTAGATATGTGGATCCTCCATGCCTGAT
TGCACGGGTTACTTGTGCTATCTGTTTTCTATCCTTTGCTTGCTGCTGCAGTGCTGCTTT
CACTATAGTAAAAATTCTTGCACAGCAGTCAGAGGCATTATGACAATATAACTGCATTCT
GCCTTCTAGGAATGGAAATTCCAAGTAAATGCACAAATGGTGGACTCAATCCACCCACCT
AGCACTGTCACAAATAATAAGAGCATGGTCATTATTCACTATTGAGGACACATTAACCTT
TGCCTTTTTGCAGACATCAACCTGTCTTGGCCCGACTTGCAAATTGGGAAGGTATTAAAA
AGTCACGATCTATCCGAGAGTTTGACCACCATGCTACTTGTGTTGTCTCAAGATATGAGA
CAGTGGATACTTACTATCGCCGGTGCAGTAGTGCTAGTTACGTCGGAAATGTGTCAGTTC
CCTTGCTTTGTATCAATGCTTTGGATGATCCTCTTTGCACAAGGGAGGCTATTCCTTGGG
ATGAATGCAGGGCCAATAAGAACATTGTTTTAGCAACTACTCCAAATGGTGGTCATCTTG
CATTCTTTCAAGGACTAACTGCGCGGAGACTATGGTGGGTTGGAGCTACTTCTGAGTTCC
TTTCTGCTCTTCATGACAGCTCCTACATGCATAGGCAGAAGGCAAATGATCATGTTTTGC
TCTCGTCTTTGGAATCCTCCATTGATAAGAGTCCGTATGTTAATCTCATGGAAGATGGAA
TGGTAGCTGCGGTAACAAAAGATGGCCCTAGCAATGACGGGTCACCTTTGAACCATGCAG
CTGATGAACAATTAAGTAACGAGGCGGGCGGTGGACAACAGAATGTGGTATCTGCATTGA
ACCATAATGAAAACTCCATTGGAGTGGGAAACGACAGCCCTGCAGAGCCAGTAAAACAGC
AAGGTGATGACATCCACAGCAATAAGCTTCATGAGATAATTGCTCCTGTCAAGAGATCTA
TGAGCCAACTGACTCGATACCAAGGGAGGTCAGTCTGGTTGCTTGCCTACATTGCTTTTG
TAACATCCTGGCCGCTGCTTGGCTCCCTAGCTTTCATCACCTTCCGGAAAAAGTCCAGGA
ATCCGTTGCGAGCTAAATGAATCATACTTATATTATGTTATTACAATTACATCATGCAAC
ATCCTCTGAGCTACGAAGGCCATTTTTCCCCGGGTCGTCACAGCTCCTGTGTACAGTATC
ATCACCGATCATCAGCAAACATTGGGGGCGCCTGGATAAACTGATACTTTGTAATTTGTA
TTGTATTTACAACAAAATAATACGCAGGATAAGCATCTGTGTAATTTTACTCGGTAAATC
TGGCTGGATTTGCTGTTT