Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042685_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:3:176827389:176830753:-1 gene:Zm00001d042685 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glutamate-oxaloacetate transaminase4 description: glutamate-oxaloacetate transaminase4
Sequence

ATGGATGCAATTAGGAATGGTTATACAAGATACACTCCTAATGCTGGGACTTTGGAGCTG
AGGAAGGCTATTTGTACTAAACTCCAGGAGGAGAACGGGGTATCCTACCTCCCAGATGAG
GTGCTGGTGAGCAATGGAGCTAAGCAATGCATCACACAAGCTGTGCTTGCAGTTTGCTCA
CCTGGTGATGAGGTTTTGATTCCAGCCCCATATTGGGTCAGTTATCCTGAGATGGCTAGA
CTGGCTGATGCGACTCCAGTGATTCTTCCTACAAACATATCAGAGAATTTCTTGTTAAGG
CCAGAGTTGCTTACCGACAAGATCAATGAGAAATCGAGGCTCTTAATTCTCTGCTCTCCA
TCTAATCCAACAGGGTCAGTATATCCAAAGGAGTTGCTTGAGAAAATAGCTGATATAGTC
AAGAAGCATCCGAGGCTTTTGGTTTTATCTGATGAAATTTATGAGCATATTATCTATCAG
CCTGCAAAACACACAAGCTTTGCTTCACTACCTGGAATGTGGGAAAGAACATTAACTGTA
AATGGTTTTTCTAAGGCTTTTGCAATGACGGGTTGGCGTCTTGGTTACCTTGCAGCCCCT
AAACATTTTGTTGCAGCATGTGGAAAGATCCAAAGCCAGTTCACCTCAGGTGCCAGCAGC
ATATCACAGAAGGCAGGGGTTGCCGCTCTGAATCTTGGCTATGCTGGTGGTGAAGCAGTA
TCAACTATGGTCAAAGCATTCCAGGAACGCCGTGACTATCTTGTGAAAAATTTCAAGGAA
CTGCCTGGTGTGAAAATATCAGAACCTCAGGGTGCCTTTTATTTGTTCATTGACTTCAGC
GCCTACTATGGGTCTGAAGTAGAGGGGTTTGGCACTATCAAGAATTCCGAGTCCCTTTGC
ATCTTCCTATTAGAGAAAGCACAGGTTGCCCTTGTCCCTGGTGACGCATTTGGGGATGAC
AAGTGCATTCGTATTTCATATGCTGCATCCCTAACTACACTTCAGACTGCGATGTCAAAA
TTAAAGGAAGCTGTTGCTCTGCTCAAGCCCTGTGTTGCTGCGTAG

Peptide Sequence

PEP ID

Zm00001d042685_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:3:176827389:176830753:-1 gene:Zm00001d042685 transcript:Zm00001d042685_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glutamate-oxaloacetate transaminase4 description: glutamate-oxaloacetate transaminase4
Sequence

MDAIRNGYTRYTPNAGTLELRKAICTKLQEENGVSYLPDEVLVSNGAKQCITQAVLAVCS
PGDEVLIPAPYWVSYPEMARLADATPVILPTNISENFLLRPELLTDKINEKSRLLILCSP
SNPTGSVYPKELLEKIADIVKKHPRLLVLSDEIYEHIIYQPAKHTSFASLPGMWERTLTV
NGFSKAFAMTGWRLGYLAAPKHFVAACGKIQSQFTSGASSISQKAGVAALNLGYAGGEAV
STMVKAFQERRDYLVKNFKELPGVKISEPQGAFYLFIDFSAYYGSEVEGFGTIKNSESLC
IFLLEKAQVALVPGDAFGDDKCIRISYAASLTTLQTAMSKLKEAVALLKPCVAA

Transcript Sequence

Transcript ID

Zm00001d042685_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:176827389:176830753:-1 gene:Zm00001d042685 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glutamate-oxaloacetate transaminase4 description: glutamate-oxaloacetate transaminase4
Sequence

ATCCAGCACCGTAGTCCTCGTCTGACGATTGTACACTACTCGTCAGATGACAACTCAAAC
AACGTCAGTCCCACTGCTGCTAAAGGGGAGCCAGACTTCGACACGCCGCCCGCGATCGCG
GAGGCCGGGATGGATGCAATTAGGAATGGTTATACAAGATACACTCCTAATGCTGGGACT
TTGGAGCTGAGGAAGGCTATTTGTACTAAACTCCAGGAGGAGAACGGGGTATCCTACCTC
CCAGATGAGGTGCTGGTGAGCAATGGAGCTAAGCAATGCATCACACAAGCTGTGCTTGCA
GTTTGCTCACCTGGTGATGAGGTTTTGATTCCAGCCCCATATTGGGTCAGTTATCCTGAG
ATGGCTAGACTGGCTGATGCGACTCCAGTGATTCTTCCTACAAACATATCAGAGAATTTC
TTGTTAAGGCCAGAGTTGCTTACCGACAAGATCAATGAGAAATCGAGGCTCTTAATTCTC
TGCTCTCCATCTAATCCAACAGGGTCAGTATATCCAAAGGAGTTGCTTGAGAAAATAGCT
GATATAGTCAAGAAGCATCCGAGGCTTTTGGTTTTATCTGATGAAATTTATGAGCATATT
ATCTATCAGCCTGCAAAACACACAAGCTTTGCTTCACTACCTGGAATGTGGGAAAGAACA
TTAACTGTAAATGGTTTTTCTAAGGCTTTTGCAATGACGGGTTGGCGTCTTGGTTACCTT
GCAGCCCCTAAACATTTTGTTGCAGCATGTGGAAAGATCCAAAGCCAGTTCACCTCAGGT
GCCAGCAGCATATCACAGAAGGCAGGGGTTGCCGCTCTGAATCTTGGCTATGCTGGTGGT
GAAGCAGTATCAACTATGGTCAAAGCATTCCAGGAACGCCGTGACTATCTTGTGAAAAAT
TTCAAGGAACTGCCTGGTGTGAAAATATCAGAACCTCAGGGTGCCTTTTATTTGTTCATT
GACTTCAGCGCCTACTATGGGTCTGAAGTAGAGGGGTTTGGCACTATCAAGAATTCCGAG
TCCCTTTGCATCTTCCTATTAGAGAAAGCACAGGTTGCCCTTGTCCCTGGTGACGCATTT
GGGGATGACAAGTGCATTCGTATTTCATATGCTGCATCCCTAACTACACTTCAGACTGCG
ATGTCAAAATTAAAGGAAGCTGTTGCTCTGCTCAAGCCCTGTGTTGCTGCGTAGCAAGAT
CACTAAATTGCAATAAGGAGTGACCAAGGCACCTTTAACTAACCTTTCACATTATTTTAA
ACACAATGTTCGAATTGTTGGGCAGACTTGGTCTGTTGTTTTTATATGTAACATTATGGA
TTTATGATGTGTACATGCAAATAAAAATGTTTTGTT