Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d042662_T014
CDS Infomation	cds chromosome:B73_RefGen_v4:3:175817317:175833138:-1 gene:Zm00001d042662 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
Sequence	ATGAGTAAAATGTGTCACGCATGTGCATCAGAGGAGACAACCATGAATGAAGCTAATATC GACCTGGCCTGCAGTACGTCTTGCTGCAAGATGTGTGATTATGGTGAGGGATCATCAATT GTTACCAGCGAGATCAACTGGCTGGCCATGGACTCGAGCCCTTACAGCACTCCTTACGGC ACCCCTGTTTTTTCCCGAGAAAATTCTTTCTCAAGCTTTGCCAGTTGCTTTTCAAGCCTT GGTGACTCTCTAACAGATTCTGATTCTGAAGAGGAGATTGAGCTCCAAGATACTGGTCAA TTTTATCATGATACCATATTAATTAAAGATTTTATGGAGCAAGAAGAGAGTTTTGTGCGA GTGGAAGAATGTCAATTTAAGGATATTGCTGATGACTGTGCTATTTTTTCCATTCCAATA AACCAATATATTTCATCTGCTGAGCAACAGCTGGAGAGACATGAAGACTCCAACAAGGGA AATTTTGATACCATTAATATTTCATTGGATTCAGATATATCTTATGAACAGAGAAAAGAC ATCCTGTCCGATGATAAACATGTAAGAACGAAATGTGCTGTACCAGTGGAAGATATTGAT CATAAAGAATCAGGTGCTATAGTTGTTGAACAGATCACTAGCCTTCCCATGCCAGGTGGT GATATTTTCCCATTGAATGAACAAGTTATGGATGGACTCAGCAGTACCTTGGAAAATACA ATAGTATATAACAATATATTGAATACCGAACCTGAAATGAAACATGGTACTCACTTTGAA AATGAAAATGAATGCCTGTACCCACTAGCTTTGCCTAGTTTTGAAGCAGATCCTCTCATT TGGTTACCACCGGAGCCAGAAAATAATGAAGATGACTTTGATACTGTTTCTAATGATGAC GACGAGAGTGGCAATAACAGCACTGGGTGGGGTAGGTCAAGTTTCAAGGTTAACTTAGCA GAGAGAAACAAGGAAAGCCGCGACGACCAATTGCAGAAAGTAATGTCAGAAGTAATGAAT GGACAATTCAAGATCCTAGTAAGTCGATTCTTGGCTGCTGAAGGGCTCTCTTTATCTGAT GGAGGCACAGATAAAAACTGGCTTGATATTGTTGCATCATTGTCATGGGATGCTGCACTA CGTGTAAAACCTGAAGCCAATTCCGGAAATGCAATGGATCCTGGTTCGTATGTGAAGGTG AAATGTTTAGCTTCAGGATCTTACCAGCAGAGTGAAGTGATCAATGGTCTTGTTTTTAAG AAGAGTGCTGCACATAAACAGATGCGTGCCAATGTAAAACATCCAAAACTGCTACTTCTT CAGGGCGCCCTTGGCCATTCGTCAACGGGGCTATCATCAATAAATTCGATGAAACAGGAA AACGATCAGCTGGAGAGAACTCTTTATGAAGTGATAGTCAAATGCCAGCTTGATGTTATA TTGGTCGAGAAAGCAGTTTCCCGTAATGTAAACGAATATATTCAGAAACAAGGAGTTACG GTAGTAAGTGACATGAATACCCATCGGTTGGAAAGAATTGCTCGCTGCATTGGCTCTCCA ATTCTATCTTTGCAGAGTGTTCTTATGAAACCCAGTCTTATTAAGCAGTGTGAATCTCTC CATTTTGAAAAGTTTGTTGAAGAGCATAATATTACTGGAGAAGATGGAAAAAAATCATGC AAAACATTTTTATTTCTAGAGGGTTTTCCAAGACCTCTGGGATGCACGATACTGCTGAAA GGAGCAACAAGGGAAGAACTTAAGAAGATTAAGCGTGTGCTTCATTTCACTGTCTTTGCA GCTTACCATTTGATCCTTGAAACTTCATTCTTTGCCGATCAAAAATTGTTTACGACAGAC AAAACTACCACAGGGAAAGAGAAGTGCTTTAAAACTAATCAACAGCTGCTTGGTTCCTGT TATGATAATTCAAAAAACAGTGACACCATGAATAACACACCAACTTGTGATGATCAGTAT CCTAATCAGGAAAAGCTTATTCATACTGAAAAATCTGTACCATTGCATCTTCATGATTCC AAAACTATGGCATCTGAAGATTCTGCTGGTGAAGAGCATATTGACAGCAAAGGCATTCAG TCATATTCATCCCTGCCTGTTTCAGATCCCTCGACAAATTTTATGCAGGACATGCCATCA CCAGATTGTGCTGAGTCAAAAATATCTGGTGGTTTTGATGGCTCAACATTCACTGATACT TCCAAAGAGGTGCAGAAGAAGGAATTGTCTAGTGACAATTTTCAGGGAACTTTTGATGTA ATTTGTGCTGAGAGTGGAGCTGCTTTGAACACTCAGGATATCTTGGTATCAATGTCTAGC CAACATATCAGGAACCAAGCTGTTTGTGAGCAGAGTCACCTGTCGCGGATAACTTATTAT GGGTATTTTGATACATCCCTTGGACGATATTTGCAAGATACTTTACTTAATGAGAAACAC AGCTGCCTATCATGTGGTGAATCTCCAGAATCTCACATGTACTCTTATACCCACCATAAT GGTACTCTAACTGTTCTTGTGAAAAGACTTCCCTTGGAGTTGACACTTTCTGGTGAGACT CAAGGAAGAATTTGGATGTGGACCAGATGTTTGAGATGCAATGCTAAGCCGACCCATAGG GTTATAATATCTTCCTCTGCACGTAATCTGTCGTTTGGAAAGTTCTTGGAACTCAGCTTC TCAACCCACTCTGCTACCAAGAAGCTACCAACATGTGGGCATTTGCTTCATAGAGACTGC CTACGTTTCTTTGGATTTGGATCCAGAGTTGCTATGTTCATATACTCATCTGTAGAAATA TATTCTGCTTGTAAGCCTCCATTGAGTTTGGAGTTCAATAACCGAAACAAAAATGATTGG CTTGACATTGAAGTGAAGAATGTCCTTCTTAAATGGAAGCAGTTATTTACAACAATTGAA AATGTAATACAAGACTTGAGATCAAGATACTCTAGTCAAGCCATGGGGGAAGACACCAAC GTTTCAGTAGATGAGGATGAGGGGTTACTTTTGGAGGTGTCCAGGATGCTTACACAAGAG AAAAATAAAGTTGAGGTTTCTCTGAGGGAGTTTAGCCGAATTGCCATACCTGAGAGTTTT GCACATGGGATCCTTGGTTTGAACTGGTTGTACCAGCAACTTCTTCTTGGGTTCTACATT TGGGATCTTCGGTTGCTTCATATTCTGCAGTACACTAAAGTTAATACTGCATCTTCAGAC AATTCCATTCATGAAAGCACAGCAAAGAATGAACCGAAGAGTTCAGCAAGTATTGCAATC CAGGACACACCATCACTAAAGGAAATTGGAACAGAAAGAAAGGAAGCAACTATAAATTCT TCTGGCAACTTTGATGATCCATTTGGTGATACAATGTTGGATAAGGTTCACCTTACTGCT AAATTAATAACCAAAGAGAAAGAGCACGATTTGCTCAATTATCAAGACCATGATGTAAAA TCAGCTCTTTCCTCTCTAGGCGAAGCTGCTGATCAGTTTGAAACGATTGCTAATGTTAAT TGTTCAGAGAAATTAAACACTATACCATTTATGAATGATGAACAACCTGCAGCATCCAAT GTATTGCATCATGTTGTCATTCCAAGTGACGATGAAGGAAAATGGTTCTGGAATCAATTT AATCAATTGGAAATGGAATACAAGAAAGAACTTGAAGGTGGTTCTTTGTATAAATTTTAC CTCATCAACAAATACACCCCATGCTCTTCACCATTGGCACAATTAAAACATCAAATGGAC TTGGGGCATTTTATAGCTGGCCATGGTGGTAATATCTTTTCAATTTCTGAGGAAGAGGCT TCTAGCATTATTGCTTATGCTCTAATTATATCTGAACAACAAGGGTTCTATTATGAAGCT GCATCTAGTAACTTGGATAAAAATGCTTCTATGCTGCCATCCATGTCGTCTCCAAATGAG TCTTTCGAAAACAACCATAAATTTTCAAGGTTTGCACCAACTGAGGAATTAACATCAGGG TTTTATGATTCATTTCTGTCAGCTTTAAAAGATCTGCACCACGAAATCGATCTGAACAAT GAAAAGATAGCTCTGAGAAGCAAATATACTGTCATTTGTATATATGCAAAACAATTCCAT GATCTTCGGAAGATGTGCTGCCCATCAGAACTTGCATATATTTCGTCAATAAGCCGCTGC AAAAACTGGAATGCACAGATTTATCATAAAACAAATCAAGAAGACTGA

Peptide Sequence

PEP ID	Zm00001d042662_P014
PEP Infomation	pep chromosome:B73_RefGen_v4:3:175817317:175833138:-1 gene:Zm00001d042662 transcript:Zm00001d042662_T014 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
Sequence	MSKMCHACASEETTMNEANIDLACSTSCCKMCDYGEGSSIVTSEINWLAMDSSPYSTPYG TPVFSRENSFSSFASCFSSLGDSLTDSDSEEEIELQDTGQFYHDTILIKDFMEQEESFVR VEECQFKDIADDCAIFSIPINQYISSAEQQLERHEDSNKGNFDTINISLDSDISYEQRKD ILSDDKHVRTKCAVPVEDIDHKESGAIVVEQITSLPMPGGDIFPLNEQVMDGLSSTLENT IVYNNILNTEPEMKHGTHFENENECLYPLALPSFEADPLIWLPPEPENNEDDFDTVSNDD DESGNNSTGWGRSSFKVNLAERNKESRDDQLQKVMSEVMNGQFKILVSRFLAAEGLSLSD GGTDKNWLDIVASLSWDAALRVKPEANSGNAMDPGSYVKVKCLASGSYQQSEVINGLVFK KSAAHKQMRANVKHPKLLLLQGALGHSSTGLSSINSMKQENDQLERTLYEVIVKCQLDVI LVEKAVSRNVNEYIQKQGVTVVSDMNTHRLERIARCIGSPILSLQSVLMKPSLIKQCESL HFEKFVEEHNITGEDGKKSCKTFLFLEGFPRPLGCTILLKGATREELKKIKRVLHFTVFA AYHLILETSFFADQKLFTTDKTTTGKEKCFKTNQQLLGSCYDNSKNSDTMNNTPTCDDQY PNQEKLIHTEKSVPLHLHDSKTMASEDSAGEEHIDSKGIQSYSSLPVSDPSTNFMQDMPS PDCAESKISGGFDGSTFTDTSKEVQKKELSSDNFQGTFDVICAESGAALNTQDILVSMSS QHIRNQAVCEQSHLSRITYYGYFDTSLGRYLQDTLLNEKHSCLSCGESPESHMYSYTHHN GTLTVLVKRLPLELTLSGETQGRIWMWTRCLRCNAKPTHRVIISSSARNLSFGKFLELSF STHSATKKLPTCGHLLHRDCLRFFGFGSRVAMFIYSSVEIYSACKPPLSLEFNNRNKNDW LDIEVKNVLLKWKQLFTTIENVIQDLRSRYSSQAMGEDTNVSVDEDEGLLLEVSRMLTQE KNKVEVSLREFSRIAIPESFAHGILGLNWLYQQLLLGFYIWDLRLLHILQYTKVNTASSD NSIHESTAKNEPKSSASIAIQDTPSLKEIGTERKEATINSSGNFDDPFGDTMLDKVHLTA KLITKEKEHDLLNYQDHDVKSALSSLGEAADQFETIANVNCSEKLNTIPFMNDEQPAASN VLHHVVIPSDDEGKWFWNQFNQLEMEYKKELEGGSLYKFYLINKYTPCSSPLAQLKHQMD LGHFIAGHGGNIFSISEEEASSIIAYALIISEQQGFYYEAASSNLDKNASMLPSMSSPNE SFENNHKFSRFAPTEELTSGFYDSFLSALKDLHHEIDLNNEKIALRSKYTVICIYAKQFH DLRKMCCPSELAYISSISRCKNWNAQIYHKTNQED

Transcript Sequence

Transcript ID	Zm00001d042662_T014
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:175817317:175833138:-1 gene:Zm00001d042662 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
Sequence	ATCGAATCCCGCGGCTCTTGGATTCATCCCTTCCCTCCCCTCTTGTTCTCCGCCATATGT GAACCGGTGAACGGGTGTGCGTGTGTCTATCGAGGCTTTCGGTGGGCGTATTCGCTCCGG TGGATTTGGAATCGTGCCTTCTCGGCGCGCACAAGTGGCATGCTAGCACAATAATGCAGT GAAGTTGTGTCATGAGTAAAATGTGTCACGCATGTGCATCAGAGGAGACAACCATGAATG AAGCTAATATCGACCTGGCCTGCAGTACGTCTTGCTGCAAGATGTGTGATTATGGTGAGG GATCATCAATTGTTACCAGCGAGATCAACTGGCTGGCCATGGACTCGAGCCCTTACAGCA CTCCTTACGGCACCCCTGTTTTTTCCCGAGAAAATTCTTTCTCAAGCTTTGCCAGTTGCT TTTCAAGCCTTGGTGACTCTCTAACAGATTCTGATTCTGAAGAGGAGATTGAGCTCCAAG ATACTGGTCAATTTTATCATGATACCATATTAATTAAAGATTTTATGGAGCAAGAAGAGA GTTTTGTGCGAGTGGAAGAATGTCAATTTAAGGATATTGCTGATGACTGTGCTATTTTTT CCATTCCAATAAACCAATATATTTCATCTGCTGAGCAACAGCTGGAGAGACATGAAGACT CCAACAAGGGAAATTTTGATACCATTAATATTTCATTGGATTCAGATATATCTTATGAAC AGAGAAAAGACATCCTGTCCGATGATAAACATGTAAGAACGAAATGTGCTGTACCAGTGG AAGATATTGATCATAAAGAATCAGGTGCTATAGTTGTTGAACAGATCACTAGCCTTCCCA TGCCAGGTGGTGATATTTTCCCATTGAATGAACAAGTTATGGATGGACTCAGCAGTACCT TGGAAAATACAATAGTATATAACAATATATTGAATACCGAACCTGAAATGAAACATGGTA CTCACTTTGAAAATGAAAATGAATGCCTGTACCCACTAGCTTTGCCTAGTTTTGAAGCAG ATCCTCTCATTTGGTTACCACCGGAGCCAGAAAATAATGAAGATGACTTTGATACTGTTT CTAATGATGACGACGAGAGTGGCAATAACAGCACTGGGTGGGGTAGGTCAAGTTTCAAGG TTAACTTAGCAGAGAGAAACAAGGAAAGCCGCGACGACCAATTGCAGAAAGTAATGTCAG AAGTAATGAATGGACAATTCAAGATCCTAGTAAGTCGATTCTTGGCTGCTGAAGGGCTCT CTTTATCTGATGGAGGCACAGATAAAAACTGGCTTGATATTGTTGCATCATTGTCATGGG ATGCTGCACTACGTGTAAAACCTGAAGCCAATTCCGGAAATGCAATGGATCCTGGTTCGT ATGTGAAGGTGAAATGTTTAGCTTCAGGATCTTACCAGCAGAGTGAAGTGATCAATGGTC TTGTTTTTAAGAAGAGTGCTGCACATAAACAGATGCGTGCCAATGTAAAACATCCAAAAC TGCTACTTCTTCAGGGCGCCCTTGGCCATTCGTCAACGGGGCTATCATCAATAAATTCGA TGAAACAGGAAAACGATCAGCTGGAGAGAACTCTTTATGAAGTGATAGTCAAATGCCAGC TTGATGTTATATTGGTCGAGAAAGCAGTTTCCCGTAATGTAAACGAATATATTCAGAAAC AAGGAGTTACGGTAGTAAGTGACATGAATACCCATCGGTTGGAAAGAATTGCTCGCTGCA TTGGCTCTCCAATTCTATCTTTGCAGAGTGTTCTTATGAAACCCAGTCTTATTAAGCAGT GTGAATCTCTCCATTTTGAAAAGTTTGTTGAAGAGCATAATATTACTGGAGAAGATGGAA AAAAATCATGCAAAACATTTTTATTTCTAGAGGGTTTTCCAAGACCTCTGGGATGCACGA TACTGCTGAAAGGAGCAACAAGGGAAGAACTTAAGAAGATTAAGCGTGTGCTTCATTTCA CTGTCTTTGCAGCTTACCATTTGATCCTTGAAACTTCATTCTTTGCCGATCAAAAATTGT TTACGACAGACAAAACTACCACAGGGAAAGAGAAGTGCTTTAAAACTAATCAACAGCTGC TTGGTTCCTGTTATGATAATTCAAAAAACAGTGACACCATGAATAACACACCAACTTGTG ATGATCAGTATCCTAATCAGGAAAAGCTTATTCATACTGAAAAATCTGTACCATTGCATC TTCATGATTCCAAAACTATGGCATCTGAAGATTCTGCTGGTGAAGAGCATATTGACAGCA AAGGCATTCAGTCATATTCATCCCTGCCTGTTTCAGATCCCTCGACAAATTTTATGCAGG ACATGCCATCACCAGATTGTGCTGAGTCAAAAATATCTGGTGGTTTTGATGGCTCAACAT TCACTGATACTTCCAAAGAGGTGCAGAAGAAGGAATTGTCTAGTGACAATTTTCAGGGAA CTTTTGATGTAATTTGTGCTGAGAGTGGAGCTGCTTTGAACACTCAGGATATCTTGGTAT CAATGTCTAGCCAACATATCAGGAACCAAGCTGTTTGTGAGCAGAGTCACCTGTCGCGGA TAACTTATTATGGGTATTTTGATACATCCCTTGGACGATATTTGCAAGATACTTTACTTA ATGAGAAACACAGCTGCCTATCATGTGGTGAATCTCCAGAATCTCACATGTACTCTTATA CCCACCATAATGGTACTCTAACTGTTCTTGTGAAAAGACTTCCCTTGGAGTTGACACTTT CTGGTGAGACTCAAGGAAGAATTTGGATGTGGACCAGATGTTTGAGATGCAATGCTAAGC CGACCCATAGGGTTATAATATCTTCCTCTGCACGTAATCTGTCGTTTGGAAAGTTCTTGG AACTCAGCTTCTCAACCCACTCTGCTACCAAGAAGCTACCAACATGTGGGCATTTGCTTC ATAGAGACTGCCTACGTTTCTTTGGATTTGGATCCAGAGTTGCTATGTTCATATACTCAT CTGTAGAAATATATTCTGCTTGTAAGCCTCCATTGAGTTTGGAGTTCAATAACCGAAACA AAAATGATTGGCTTGACATTGAAGTGAAGAATGTCCTTCTTAAATGGAAGCAGTTATTTA CAACAATTGAAAATGTAATACAAGACTTGAGATCAAGATACTCTAGTCAAGCCATGGGGG AAGACACCAACGTTTCAGTAGATGAGGATGAGGGGTTACTTTTGGAGGTGTCCAGGATGC TTACACAAGAGAAAAATAAAGTTGAGGTTTCTCTGAGGGAGTTTAGCCGAATTGCCATAC CTGAGAGTTTTGCACATGGGATCCTTGGTTTGAACTGGTTGTACCAGCAACTTCTTCTTG GGTTCTACATTTGGGATCTTCGGTTGCTTCATATTCTGCAGTACACTAAAGTTAATACTG CATCTTCAGACAATTCCATTCATGAAAGCACAGCAAAGAATGAACCGAAGAGTTCAGCAA GTATTGCAATCCAGGACACACCATCACTAAAGGAAATTGGAACAGAAAGAAAGGAAGCAA CTATAAATTCTTCTGGCAACTTTGATGATCCATTTGGTGATACAATGTTGGATAAGGTTC ACCTTACTGCTAAATTAATAACCAAAGAGAAAGAGCACGATTTGCTCAATTATCAAGACC ATGATGTAAAATCAGCTCTTTCCTCTCTAGGCGAAGCTGCTGATCAGTTTGAAACGATTG CTAATGTTAATTGTTCAGAGAAATTAAACACTATACCATTTATGAATGATGAACAACCTG CAGCATCCAATGTATTGCATCATGTTGTCATTCCAAGTGACGATGAAGGAAAATGGTTCT GGAATCAATTTAATCAATTGGAAATGGAATACAAGAAAGAACTTGAAGGTGGTTCTTTGT ATAAATTTTACCTCATCAACAAATACACCCCATGCTCTTCACCATTGGCACAATTAAAAC ATCAAATGGACTTGGGGCATTTTATAGCTGGCCATGGTGGTAATATCTTTTCAATTTCTG AGGAAGAGGCTTCTAGCATTATTGCTTATGCTCTAATTATATCTGAACAACAAGGGTTCT ATTATGAAGCTGCATCTAGTAACTTGGATAAAAATGCTTCTATGCTGCCATCCATGTCGT CTCCAAATGAGTCTTTCGAAAACAACCATAAATTTTCAAGGTTTGCACCAACTGAGGAAT TAACATCAGGGTTTTATGATTCATTTCTGTCAGCTTTAAAAGATCTGCACCACGAAATCG ATCTGAACAATGAAAAGATAGCTCTGAGAAGCAAATATACTGTCATTTGTATATATGCAA AACAATTCCATGATCTTCGGAAGATGTGCTGCCCATCAGAACTTGCATATATTTCGTCAA TAAGCCGCTGCAAAAACTGGAATGCACAGATTTATCATAAAACAAATCAAGAAGACTGAA TTTGACTCGTTCTTAAAGTTTGGTCTTGAGTACTTTAAGCATTTTGGTGCATCTCAGGTT TCAAGCAACCCTACTTGTCTTGCGAAAATTCTAGGAATATATCAGGTTAAGGAAACTAGG AATGGCAAGGAGACAAGGGTTAACTTCATGGTTATGGAAAATCTTCTGTTTGGACATAAT ATACTACGCAGATATGATCTGAAGGGTGCTCTTTTCTCACGATATATTCCTGATTCAGAA AATTCTGAAAAGGTACTGTTGGATCAAAATTTTATTGAAGACATGCGTACCATGCCAATC TACATTCAAGGAAAAACTAAAAACCTCATGGAACGCGCTATTTGGAACGACACATCTTTC CTAAGTAACATGAATGTCATGGATTACTCCTTGCTTGTTGGAGTTGACAAAGAGAAGAAA GAGCTTGTATTTGGAATTATAGATTATTTGAGACAATATACCTGGGACAAACAGCTGGAA TCTTGGGTGAAGACATCTCTTGTTGTTCCAAAGAATCTATCCCCAACTGTAATTTTACCT AGGGAGTACAAAATGAGATTCAGGGCCTTTATGTCACAATACTTTCTATCAGTTC