Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d042654_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:3:175449846:175456635:-1 gene:Zm00001d042654 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-galactosidase

Sequence

ATGATGAAGAAAGAGCAGCTCTTCGCTTCTCAGGGAGGGAACATTATCCTAGCTCAGATA
GAGAACGAATATGGAGATTATTATGAACAAGCGTATGGAGCTGGCGGCAAACCATACGCC
ATGTGGGCAGCTAGTATGGCTCTTGCTCAAAACACTGGTGTCCCTTGGATTATGTGCCAA
GAGTCTGATGCTCCTGATCCCGTGATAAACTCTTGCAATGGTTTCTACTGCGATGGATTC
CAGCCAAATTCGCCAACCAAGCCAAAAATTTGGACTGAGAATTGGCCAGGATGGTTCCAG
ACTTTTGGTGAAAGTAATCCCCACAGACCACCTGAAGATGTTGCATTCGCTGTTGCACGT
TTTTTCGAGAAAGGTGGCAGTGTTCAGAATTACTATGTGTATCATGGTGGCACAAATTTT
GGTCGCACTACTGGGGGGCCATTCATTACAACTAGCTACGACTATGATGCACCAATTGAT
GAATATGGACTTCGGAGATTTCCAAAGTGGGCACATCTGAGGGATCTTCACAAATCTATA
AGATTGTGTGAGCACACCCTGCTTTATGGAAATACAACGTTTCTTTCTCTGGGTCCTAAA
CAAGAGGCTGATATTTACAGTGATCAGTCTGGAGGCTGTGTTGCATTCTTGGCAAATATT
GATTCAGCCAATGACAAAGTTGTCACTTTCCGTAACAGGCAATATGATCTTCCTGCTTGG
TCAGTTAGCATTCTTCCTGACTGCAGGAATGTGGTGTTCAACACTGCAAAGGTGCAATCT
CAAACTTCAATGGTGACCATGGTTCCAGAAAGTTTGCAAGCATCAAAACCTGAGCGATGG
AGCATTTTCAGGGAGAGAACTGGGATTTGGGGTAAAAATGACTTTGTCCGGAATGGATTT
GTGGACCATATTAATACGACAAAGGACTCCACCGACTACCTATGGTACACAACAAGTTTT
AGTGTGGATGGAAGTTACTCCTCAAAAGGGAGCCATGCTGTCCTTAATATCGACTCCAAT
GGCCATGGTGTCCATGCTTTCTTGAATAATGTGCTCATAGGTAGTGCATATGGTAATGGC
TCACAATCAAGATTCAGTGTCAAATTGCCCATCAACCTGAGGACTGGAAAGAATGAACTT
GCCCTTCTAAGTATGACTGTTGGTTTACAAAATGCAGGATTCGCTTATGAATGGATAGGA
GCAGGCTTTACAAATGTGAACATCTCTGGTGTGAGAACTGGAACCATAGACTTGTCTTCA
AATAATTGGGCATACAAGATTGGACTGGAAGGGGAATATTATAATTTGTTCAAGCCTGAT
CAGACAAATAACCAACGGTGGATACCACAATCCGAGCCACCAAAAAACCAACCTTTGACA
TGGTATAAGGTAAATGTTGATGTTCCACAAGGAGATGACCCAGTTGGGATAGACATGCAG
TCTATGGGGAAAGGCTTGGCTTGGTTGAATGGAAATGCCATCGGGCGGTATTGGCCGAGG
ACCAGTTCTATTAATGATAGGTGCACTCCCAGTTGTAACTACAGGGGAACATTTATTCCA
GACAAGTGCAGGACAGGTTGTGGACAGCCAACTCAGAGATGGTACCATATCCCACGGTCA
TGGTTTCATCCCTCAGGGAACATCCTCGTGGTCTTTGAGGAGAAGGGTGGGGATCCCACG
AAGATCACATTCTCAAGAAGAGCTGTGACGAGCGTGTGCTCCTTTGTGTCAGAGCACTTC
CCTTCCATAGACTTGGAATCCTGGGATGAAAGTGCCATGACCGAAGGCACACCCCCAGCC
AAAGCACAGCTGTTTTGCCCCGAGGGTAAAAGTATATCTTCCGTGAAGTTTGCGAGCTTG
GGAAACCCCAGTGGAACCTGTAGATCATACCAAATGGGGCGCTGCCACCACCCGAACTCC
TTATCTGTTGTTGAGAAGGCTTGTCTGAACACCAACAGCTGTACAGTCTCCCTGACAGAC
GAGAGCTTTGGGAAGGATTTATGCCCTGGAGTCACCAAAACACTCGCCATCGAAGCGGAC
TGTTCTTAG

Peptide Sequence

PEP ID

Zm00001d042654_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:3:175449846:175456635:-1 gene:Zm00001d042654 transcript:Zm00001d042654_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-galactosidase

Sequence

MMKKEQLFASQGGNIILAQIENEYGDYYEQAYGAGGKPYAMWAASMALAQNTGVPWIMCQ
ESDAPDPVINSCNGFYCDGFQPNSPTKPKIWTENWPGWFQTFGESNPHRPPEDVAFAVAR
FFEKGGSVQNYYVYHGGTNFGRTTGGPFITTSYDYDAPIDEYGLRRFPKWAHLRDLHKSI
RLCEHTLLYGNTTFLSLGPKQEADIYSDQSGGCVAFLANIDSANDKVVTFRNRQYDLPAW
SVSILPDCRNVVFNTAKVQSQTSMVTMVPESLQASKPERWSIFRERTGIWGKNDFVRNGF
VDHINTTKDSTDYLWYTTSFSVDGSYSSKGSHAVLNIDSNGHGVHAFLNNVLIGSAYGNG
SQSRFSVKLPINLRTGKNELALLSMTVGLQNAGFAYEWIGAGFTNVNISGVRTGTIDLSS
NNWAYKIGLEGEYYNLFKPDQTNNQRWIPQSEPPKNQPLTWYKVNVDVPQGDDPVGIDMQ
SMGKGLAWLNGNAIGRYWPRTSSINDRCTPSCNYRGTFIPDKCRTGCGQPTQRWYHIPRS
WFHPSGNILVVFEEKGGDPTKITFSRRAVTSVCSFVSEHFPSIDLESWDESAMTEGTPPA
KAQLFCPEGKSISSVKFASLGNPSGTCRSYQMGRCHHPNSLSVVEKACLNTNSCTVSLTD
ESFGKDLCPGVTKTLAIEADCS

Transcript Sequence

Transcript ID

Zm00001d042654_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:175449846:175456635:-1 gene:Zm00001d042654 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-galactosidase

Sequence

CTGGTGGCTGAAGCCAAGGACGGCGGCGCCGACTGCATCGAGACCTACGTCTTCTGGAAC
GGCCATGAAATCGCCCCAGGCCAGGTTCGCCGGGTCGTTAGAGACGCTGGGCTGCTCTTG
ATCCTGCGCATCGGGCCCTATGTGGCCGCCGAGTGGAATTATGGAGGCGTGCCGGTGTGG
TTGCACTACGTGCCAGGAACGGTTTTCAGGACAAACAACGAGCCATTCAAGAACCATGTG
AAGAGTTTCACGACATACATCGTGGATATGATGAAGAAAGAGCAGCTCTTCGCTTCTCAG
GGAGGGAACATTATCCTAGCTCAGATAGAGAACGAATATGGAGATTATTATGAACAAGCG
TATGGAGCTGGCGGCAAACCATACGCCATGTGGGCAGCTAGTATGGCTCTTGCTCAAAAC
ACTGGTGTCCCTTGGATTATGTGCCAAGAGTCTGATGCTCCTGATCCCGTGATAAACTCT
TGCAATGGTTTCTACTGCGATGGATTCCAGCCAAATTCGCCAACCAAGCCAAAAATTTGG
ACTGAGAATTGGCCAGGATGGTTCCAGACTTTTGGTGAAAGTAATCCCCACAGACCACCT
GAAGATGTTGCATTCGCTGTTGCACGTTTTTTCGAGAAAGGTGGCAGTGTTCAGAATTAC
TATGTGTATCATGGTGGCACAAATTTTGGTCGCACTACTGGGGGGCCATTCATTACAACT
AGCTACGACTATGATGCACCAATTGATGAATATGGACTTCGGAGATTTCCAAAGTGGGCA
CATCTGAGGGATCTTCACAAATCTATAAGATTGTGTGAGCACACCCTGCTTTATGGAAAT
ACAACGTTTCTTTCTCTGGGTCCTAAACAAGAGGCTGATATTTACAGTGATCAGTCTGGA
GGCTGTGTTGCATTCTTGGCAAATATTGATTCAGCCAATGACAAAGTTGTCACTTTCCGT
AACAGGCAATATGATCTTCCTGCTTGGTCAGTTAGCATTCTTCCTGACTGCAGGAATGTG
GTGTTCAACACTGCAAAGGTGCAATCTCAAACTTCAATGGTGACCATGGTTCCAGAAAGT
TTGCAAGCATCAAAACCTGAGCGATGGAGCATTTTCAGGGAGAGAACTGGGATTTGGGGT
AAAAATGACTTTGTCCGGAATGGATTTGTGGACCATATTAATACGACAAAGGACTCCACC
GACTACCTATGGTACACAACAAGTTTTAGTGTGGATGGAAGTTACTCCTCAAAAGGGAGC
CATGCTGTCCTTAATATCGACTCCAATGGCCATGGTGTCCATGCTTTCTTGAATAATGTG
CTCATAGGTAGTGCATATGGTAATGGCTCACAATCAAGATTCAGTGTCAAATTGCCCATC
AACCTGAGGACTGGAAAGAATGAACTTGCCCTTCTAAGTATGACTGTTGGTTTACAAAAT
GCAGGATTCGCTTATGAATGGATAGGAGCAGGCTTTACAAATGTGAACATCTCTGGTGTG
AGAACTGGAACCATAGACTTGTCTTCAAATAATTGGGCATACAAGATTGGACTGGAAGGG
GAATATTATAATTTGTTCAAGCCTGATCAGACAAATAACCAACGGTGGATACCACAATCC
GAGCCACCAAAAAACCAACCTTTGACATGGTATAAGGTAAATGTTGATGTTCCACAAGGA
GATGACCCAGTTGGGATAGACATGCAGTCTATGGGGAAAGGCTTGGCTTGGTTGAATGGA
AATGCCATCGGGCGGTATTGGCCGAGGACCAGTTCTATTAATGATAGGTGCACTCCCAGT
TGTAACTACAGGGGAACATTTATTCCAGACAAGTGCAGGACAGGTTGTGGACAGCCAACT
CAGAGATGGTACCATATCCCACGGTCATGGTTTCATCCCTCAGGGAACATCCTCGTGGTC
TTTGAGGAGAAGGGTGGGGATCCCACGAAGATCACATTCTCAAGAAGAGCTGTGACGAGC
GTGTGCTCCTTTGTGTCAGAGCACTTCCCTTCCATAGACTTGGAATCCTGGGATGAAAGT
GCCATGACCGAAGGCACACCCCCAGCCAAAGCACAGCTGTTTTGCCCCGAGGGTAAAAGT
ATATCTTCCGTGAAGTTTGCGAGCTTGGGAAACCCCAGTGGAACCTGTAGATCATACCAA
ATGGGGCGCTGCCACCACCCGAACTCCTTATCTGTTGTTGAGAAGGCTTGTCTGAACACC
AACAGCTGTACAGTCTCCCTGACAGACGAGAGCTTTGGGAAGGATTTATGCCCTGGAGTC
ACCAAAACACTCGCCATCGAAGCGGACTGTTCTTAGTGGCCTACGGAGTACGAAGTGTCT
CGGTGTGCATCTAGGTTCCACTGCAAGTATGCCCGTCAAAATTCTAAAACTGTAGTGCTT
GTTGCACGGCAATGCTATTGTAACCTGGATTTGAATGTATCCATCTGAGCTAGGTTATGT
TTCAGGAGCTTTC